RNA–Protein interactions for RNA: ENST00000439176.5

ERCC8-203, Transcript of ERCC excision repair 8, CSA ubiquitin ligase complex subunit, humanhuman

TSL 5

Gene ERCC8, Length 684 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC8-203ENST00000439176 ZHX2Q9Y6X8 837 aa8.36□□□□□ -1.07
ERCC8-203ENST00000439176 MROH7-TTC4A0A0A0MT08 1334 aa8.35□□□□□ -1.07
ERCC8-203ENST00000439176 GPR75-ASB3A0A0A6YYF3 556 aa8.35□□□□□ -1.07
ERCC8-203ENST00000439176 BAG3O95817 575 aa8.35□□□□□ -1.07
ERCC8-203ENST00000439176 PSMC4P43686 418 aa8.35□□□□□ -1.07
ERCC8-203ENST00000439176 FCGRTP55899 365 aa8.35□□□□□ -1.07
ERCC8-203ENST00000439176 MECOMQ03112 1051 aa8.35□□□□□ -1.07
ERCC8-203ENST00000439176 NBR1Q14596 966 aa8.35□□□□□ -1.07
ERCC8-203ENST00000439176 CCDC158Q5M9N0 1113 aa8.35□□□□□ -1.07
ERCC8-203ENST00000439176 C17orf99Q6UX52 265 aa8.35□□□□□ -1.07
ERCC8-203ENST00000439176 FTSJ3Q8IY81 847 aaKnown RBP8.35□□□□□ -1.07
ERCC8-203ENST00000439176 CLUAP1Q96AJ1 413 aa8.35□□□□□ -1.07
ERCC8-203ENST00000439176 KCNK17Q96T54 332 aa8.35□□□□□ -1.07
ERCC8-203ENST00000439176 LRP2BPQ9P2M1 347 aa8.35□□□□□ -1.07
ERCC8-203ENST00000439176 CPA4Q9UI42 421 aa8.35□□□□□ -1.07
ERCC8-203ENST00000439176 KIAA0100Q14667 2235 aaKnown RBP8.34□□□□□ -1.07
ERCC8-203ENST00000439176 GRXCR2A6NFK2 248 aa8.34□□□□□ -1.07
ERCC8-203ENST00000439176 PPP1R3GB7ZBB8 358 aa8.34□□□□□ -1.07
ERCC8-203ENST00000439176 IGSF3O75054 1194 aa8.34□□□□□ -1.07
ERCC8-203ENST00000439176 BCAR3O75815 825 aa8.34□□□□□ -1.07
ERCC8-203ENST00000439176 PTPRAP18433 802 aa8.34□□□□□ -1.07
ERCC8-203ENST00000439176 EN2P19622 333 aaPredicted RBP8.34□□□□□ -1.07
ERCC8-203ENST00000439176 COL9A1P20849 921 aa8.34□□□□□ -1.07
ERCC8-203ENST00000439176 UBXN2AP68543 259 aa8.34□□□□□ -1.07
ERCC8-203ENST00000439176 MAP3K10Q02779 954 aa8.34□□□□□ -1.07
ERCC8-203ENST00000439176 ZFPM1Q8IX07 1006 aa8.34□□□□□ -1.07
ERCC8-203ENST00000439176 NKX2-3Q8TAU0 364 aa8.34□□□□□ -1.07
ERCC8-203ENST00000439176 SMCR8Q8TEV9 937 aaPredicted RBP8.34□□□□□ -1.07
ERCC8-203ENST00000439176 TRIM47Q96LD4 638 aa8.34□□□□□ -1.07
ERCC8-203ENST00000439176 TBC1D2Q9BYX2 928 aa8.34□□□□□ -1.07
ERCC8-203ENST00000439176 XPO5Q9HAV4 1204 aaKnown RBP eCLIP8.34□□□□□ -1.07
ERCC8-203ENST00000439176 HMG20BQ9P0W2 317 aa8.34□□□□□ -1.07
ERCC8-203ENST00000439176 BIN2Q9UBW5 565 aaPredicted RBP8.34□□□□□ -1.07
ERCC8-203ENST00000439176 SRRDQ9UH36 339 aa8.34□□□□□ -1.07
ERCC8-203ENST00000439176 PNMA3Q9UL41 463 aa8.34□□□□□ -1.07
ERCC8-203ENST00000439176 VPS9D1Q9Y2B5 631 aa8.34□□□□□ -1.07
ERCC8-203ENST00000439176 SLC45A1Q9Y2W3 748 aa8.34□□□□□ -1.07
ERCC8-203ENST00000439176 TNRC18O15417 2968 aaPredicted RBP8.34□□□□□ -1.08
ERCC8-203ENST00000439176 MYPNQ86TC9 1320 aa8.33□□□□□ -1.08
ERCC8-203ENST00000439176 MYH2Q9UKX2 1941 aa8.33□□□□□ -1.08
ERCC8-203ENST00000439176 A0A0G2JLL6 359 aaPredicted RBP8.33□□□□□ -1.08
ERCC8-203ENST00000439176 DDTLA6NHG4 134 aaPredicted RBP8.33□□□□□ -1.08
ERCC8-203ENST00000439176 TRIM75PA6NK02 468 aa8.33□□□□□ -1.08
ERCC8-203ENST00000439176 PHF20L1A8MW92 1017 aa8.33□□□□□ -1.08
ERCC8-203ENST00000439176 BHMG1C9JSJ3 638 aaPredicted RBP8.33□□□□□ -1.08
ERCC8-203ENST00000439176 MYCP01106 439 aaPredicted RBP8.33□□□□□ -1.08
ERCC8-203ENST00000439176 ARID4AP29374 1257 aaPredicted RBP8.33□□□□□ -1.08
ERCC8-203ENST00000439176 PABPC4Q13310 644 aaKnown RBP eCLIP8.33□□□□□ -1.08
ERCC8-203ENST00000439176 TTC39AQ5SRH9 613 aa8.33□□□□□ -1.08
ERCC8-203ENST00000439176 THSD4Q6ZMP0 1018 aa8.33□□□□□ -1.08
ERCC8-203ENST00000439176 GADL1Q6ZQY3 521 aa8.33□□□□□ -1.08
ERCC8-203ENST00000439176 PRRT2Q7Z6L0 340 aaPredicted RBP8.33□□□□□ -1.08
ERCC8-203ENST00000439176 SH3TC2Q8TF17 1288 aa8.33□□□□□ -1.08
ERCC8-203ENST00000439176 NSUN4Q96CB9 384 aaKnown RBP8.33□□□□□ -1.08
ERCC8-203ENST00000439176 TRIM34Q9BYJ4 488 aa8.33□□□□□ -1.08
ERCC8-203ENST00000439176 ARHGAP39Q9C0H5 1083 aa8.33□□□□□ -1.08
ERCC8-203ENST00000439176 OSBPL5Q9H0X9 879 aaPredicted RBP8.33□□□□□ -1.08
ERCC8-203ENST00000439176 GPR108Q9NPR9 543 aa8.33□□□□□ -1.08
ERCC8-203ENST00000439176 AFG3L2Q9Y4W6 797 aa8.33□□□□□ -1.08
ERCC8-203ENST00000439176 PNMA6EA0A0J9YXQ4 647 aa8.32□□□□□ -1.08
ERCC8-203ENST00000439176 SURF6O75683 361 aaKnown RBP8.32□□□□□ -1.08
ERCC8-203ENST00000439176 CYP2C8P10632 490 aa8.32□□□□□ -1.08
ERCC8-203ENST00000439176 GRK4P32298 578 aa8.32□□□□□ -1.08
ERCC8-203ENST00000439176 ATP8B2P98198 1209 aa8.32□□□□□ -1.08
ERCC8-203ENST00000439176 HNRNPUQ00839 825 aaKnown RBP eCLIP8.32□□□□□ -1.08
ERCC8-203ENST00000439176 CAP1Q01518 475 aa8.32□□□□□ -1.08
ERCC8-203ENST00000439176 NAA16Q6N069 864 aaPredicted RBP8.32□□□□□ -1.08
ERCC8-203ENST00000439176 TBC1D9Q6ZT07 1266 aa8.32□□□□□ -1.08
ERCC8-203ENST00000439176 SH3BP5LQ7L8J4 393 aa8.32□□□□□ -1.08
ERCC8-203ENST00000439176 ITPRIPQ8IWB1 547 aa8.32□□□□□ -1.08
ERCC8-203ENST00000439176 TEX11Q8IYF3 940 aa8.32□□□□□ -1.08
ERCC8-203ENST00000439176 TMEM57Q8N5G2 664 aa8.32□□□□□ -1.08
ERCC8-203ENST00000439176 DHX36Q9H2U1 1008 aaKnown RBP8.32□□□□□ -1.08
ERCC8-203ENST00000439176 AS3MTQ9HBK9 375 aa8.32□□□□□ -1.08
ERCC8-203ENST00000439176 PI4KBQ9UBF8 816 aa8.32□□□□□ -1.08
ERCC8-203ENST00000439176 HERC5Q9UII4 1024 aaKnown RBP8.32□□□□□ -1.08
ERCC8-203ENST00000439176 ATRNL1Q5VV63 1379 aa8.32□□□□□ -1.08
ERCC8-203ENST00000439176 TNPO2O14787 897 aaKnown RBP8.31□□□□□ -1.08
ERCC8-203ENST00000439176 BCRP11274 1271 aa8.31□□□□□ -1.08
ERCC8-203ENST00000439176 CAPN2P17655 700 aa8.31□□□□□ -1.08
ERCC8-203ENST00000439176 MCAMP43121 646 aa8.31□□□□□ -1.08
ERCC8-203ENST00000439176 RHBDL3P58872 404 aa8.31□□□□□ -1.08
ERCC8-203ENST00000439176 MOGSQ13724 837 aa8.31□□□□□ -1.08
ERCC8-203ENST00000439176 TSR1Q2NL82 804 aaKnown RBP8.31□□□□□ -1.08
ERCC8-203ENST00000439176 TNNI3KQ59H18 835 aa8.31□□□□□ -1.08
ERCC8-203ENST00000439176 GPAT2Q6NUI2 795 aa8.31□□□□□ -1.08
ERCC8-203ENST00000439176 CERS3Q8IU89 383 aa8.31□□□□□ -1.08
ERCC8-203ENST00000439176 PROCA1Q8NCQ7 364 aaPredicted RBP8.31□□□□□ -1.08
ERCC8-203ENST00000439176 ZNF280CQ8ND82 737 aa8.31□□□□□ -1.08
ERCC8-203ENST00000439176 SSH3Q8TE77 659 aa8.31□□□□□ -1.08
ERCC8-203ENST00000439176 COA7Q96BR5 231 aa8.31□□□□□ -1.08
ERCC8-203ENST00000439176 DDX4Q9NQI0 724 aaKnown RBP8.31□□□□□ -1.08
ERCC8-203ENST00000439176 NPDC1Q9NQX5 325 aaPredicted RBP8.31□□□□□ -1.08
ERCC8-203ENST00000439176 AGTPBP1Q9UPW5 1226 aa8.31□□□□□ -1.08
ERCC8-203ENST00000439176 FPGT-TNNI3KV9GXZ4 949 aa8.31□□□□□ -1.08
ERCC8-203ENST00000439176 RFX7Q2KHR2 1363 aa8.31□□□□□ -1.08
ERCC8-203ENST00000439176 ADGRA2Q96PE1 1338 aa8.3□□□□□ -1.08
ERCC8-203ENST00000439176 RBBP6Q7Z6E9 1792 aaKnown RBP8.3□□□□□ -1.08
ERCC8-203ENST00000439176 USP17L5A8MUK1 530 aa8.3□□□□□ -1.08
ERCC8-203ENST00000439176 HLA-DOAP06340 250 aa8.3□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms