RNA–Protein interactions for RNA: ENST00000439117.6

TSC2-206, Transcript of TSC complex subunit 2, humanhuman

TSL 1 (best)

Gene TSC2, Length 5,073 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSC2-206ENST00000439117 ERMNQ8TAM6 284 aa16.73■□□□□ 0.27
TSC2-206ENST00000439117 SYNMO15061 1565 aa16.73■□□□□ 0.27
TSC2-206ENST00000439117 RBM26Q5T8P6 1007 aaKnown RBP16.73■□□□□ 0.27
TSC2-206ENST00000439117 CEP128Q6ZU80 1094 aa16.73■□□□□ 0.27
TSC2-206ENST00000439117 GAS2L3Q86XJ1 694 aa16.73■□□□□ 0.27
TSC2-206ENST00000439117 C6orf50Q9HD87 102 aa16.73■□□□□ 0.27
TSC2-206ENST00000439117 RNF10Q8N5U6 811 aaKnown RBP16.73■□□□□ 0.27
TSC2-206ENST00000439117 LEO1Q8WVC0 666 aaPredicted RBP16.73■□□□□ 0.27
TSC2-206ENST00000439117 MROH5Q6ZUA9 1318 aa16.73■□□□□ 0.27
TSC2-206ENST00000439117 GADD45BO75293 160 aaPredicted RBP16.72■□□□□ 0.27
TSC2-206ENST00000439117 MTMR3Q13615 1198 aa16.72■□□□□ 0.27
TSC2-206ENST00000439117 TAOK1Q7L7X3 1001 aa16.72■□□□□ 0.27
TSC2-206ENST00000439117 TRMT1LQ7Z2T5 733 aaKnown RBP16.72■□□□□ 0.27
TSC2-206ENST00000439117 PHLDB2Q86SQ0 1253 aa16.72■□□□□ 0.27
TSC2-206ENST00000439117 RABEP2Q9H5N1 569 aa16.72■□□□□ 0.27
TSC2-206ENST00000439117 TET3O43151 1660 aa16.72■□□□□ 0.27
TSC2-206ENST00000439117 LIG3P49916 1009 aa16.72■□□□□ 0.27
TSC2-206ENST00000439117 SYCP3Q8IZU3 236 aa16.72■□□□□ 0.27
TSC2-206ENST00000439117 BCAS4Q8TDM0 211 aa16.72■□□□□ 0.27
TSC2-206ENST00000439117 LLPHQ9BRT6 129 aaKnown RBP16.72■□□□□ 0.27
TSC2-206ENST00000439117 FYB2Q5VWT5 728 aa16.72■□□□□ 0.27
TSC2-206ENST00000439117 CCDC25Q86WR0 208 aa16.72■□□□□ 0.27
TSC2-206ENST00000439117 E7EVH7 732 aa16.72■□□□□ 0.27
TSC2-206ENST00000439117 NLRP12P59046 1061 aa16.72■□□□□ 0.27
TSC2-206ENST00000439117 RRP36Q96EU6 259 aaKnown RBP16.72■□□□□ 0.27
TSC2-206ENST00000439117 GNGT1P63211 74 aa16.71■□□□□ 0.27
TSC2-206ENST00000439117 MPHOSPH6Q99547 160 aaKnown RBP16.71■□□□□ 0.27
TSC2-206ENST00000439117 KDRP35968 1356 aa16.71■□□□□ 0.27
TSC2-206ENST00000439117 IBTKQ9P2D0 1353 aaPredicted RBP16.71■□□□□ 0.27
TSC2-206ENST00000439117 SGSM2O43147 1006 aa16.71■□□□□ 0.27
TSC2-206ENST00000439117 APBA3O96018 575 aa16.71■□□□□ 0.27
TSC2-206ENST00000439117 ATP2A2P16615 1042 aaKnown RBP16.71■□□□□ 0.27
TSC2-206ENST00000439117 TTLL7Q6ZT98 887 aa16.71■□□□□ 0.27
TSC2-206ENST00000439117 USP37Q86T82 979 aa16.71■□□□□ 0.27
TSC2-206ENST00000439117 CCDC24Q8N4L8 307 aa16.71■□□□□ 0.27
TSC2-206ENST00000439117 SMARCC2Q8TAQ2 1214 aa16.71■□□□□ 0.27
TSC2-206ENST00000439117 TBC1D31Q96DN5 1066 aa16.71■□□□□ 0.27
TSC2-206ENST00000439117 MRFAP1L1Q96HT8 127 aa16.71■□□□□ 0.27
TSC2-206ENST00000439117 GOLGA8KD6RF30 607 aa16.71■□□□□ 0.27
TSC2-206ENST00000439117 GPAA1O43292 621 aa16.71■□□□□ 0.27
TSC2-206ENST00000439117 ARID5AQ03989 594 aa16.71■□□□□ 0.27
TSC2-206ENST00000439117 RAB3IL1Q8TBN0 382 aa16.71■□□□□ 0.27
TSC2-206ENST00000439117 SSH3Q8TE77 659 aa16.71■□□□□ 0.27
TSC2-206ENST00000439117 SECISBP2LQ93073 1101 aaKnown RBP16.71■□□□□ 0.27
TSC2-206ENST00000439117 MCUR1Q96AQ8 359 aa16.71■□□□□ 0.27
TSC2-206ENST00000439117 TSKSQ9UJT2 592 aa16.71■□□□□ 0.27
TSC2-206ENST00000439117 JRKLQ9Y4A0 524 aa16.71■□□□□ 0.27
TSC2-206ENST00000439117 CLASP1Q7Z460 1538 aa16.71■□□□□ 0.26
TSC2-206ENST00000439117 LUC7L3O95232 432 aaKnown RBP16.7■□□□□ 0.26
TSC2-206ENST00000439117 PPP1R7Q15435 360 aa16.7■□□□□ 0.26
TSC2-206ENST00000439117 NUP58Q9BVL2 599 aa16.7■□□□□ 0.26
TSC2-206ENST00000439117 ARMT1Q9H993 441 aa16.7■□□□□ 0.26
TSC2-206ENST00000439117 HIP1RO75146 1068 aa16.7■□□□□ 0.26
TSC2-206ENST00000439117 RASSF2P50749 326 aa16.7■□□□□ 0.26
TSC2-206ENST00000439117 MAP7D1Q3KQU3 841 aa16.7■□□□□ 0.26
TSC2-206ENST00000439117 GSTA5Q7RTV2 222 aa16.7■□□□□ 0.26
TSC2-206ENST00000439117 A0A087WUV0 522 aaPredicted RBP16.7■□□□□ 0.26
TSC2-206ENST00000439117 H0YIN7 160 aa16.7■□□□□ 0.26
TSC2-206ENST00000439117 TBC1D8BQ0IIM8 1120 aa16.7■□□□□ 0.26
TSC2-206ENST00000439117 FERMT2Q96AC1 680 aa16.7■□□□□ 0.26
TSC2-206ENST00000439117 FAM227BQ96M60 508 aa16.7■□□□□ 0.26
TSC2-206ENST00000439117 GBP5Q96PP8 586 aa16.7■□□□□ 0.26
TSC2-206ENST00000439117 MAP7Q14244 749 aa16.7■□□□□ 0.26
TSC2-206ENST00000439117 ZNF365Q70YC5 407 aa16.7■□□□□ 0.26
TSC2-206ENST00000439117 CEP120Q8N960 986 aa16.7■□□□□ 0.26
TSC2-206ENST00000439117 WDR17Q8IZU2 1322 aa16.7■□□□□ 0.26
TSC2-206ENST00000439117 CASQ2O14958 399 aaPredicted RBP16.69■□□□□ 0.26
TSC2-206ENST00000439117 DPP8Q6V1X1 898 aaPredicted RBP16.69■□□□□ 0.26
TSC2-206ENST00000439117 DDX23Q9BUQ8 820 aaKnown RBP16.69■□□□□ 0.26
TSC2-206ENST00000439117 CAPS2Q9BXY5 557 aa16.69■□□□□ 0.26
TSC2-206ENST00000439117 PSDA5PKW4 1024 aaPredicted RBP16.69■□□□□ 0.26
TSC2-206ENST00000439117 SLC27A2O14975 620 aa16.69■□□□□ 0.26
TSC2-206ENST00000439117 RPS8P62241 208 aaKnown RBP16.69■□□□□ 0.26
TSC2-206ENST00000439117 BEND3Q5T5X7 828 aa16.69■□□□□ 0.26
TSC2-206ENST00000439117 RABGGTAQ92696 567 aa16.69■□□□□ 0.26
TSC2-206ENST00000439117 ERBB3P21860 1342 aa16.69■□□□□ 0.26
TSC2-206ENST00000439117 CDC42BPAQ5VT25 1732 aa16.69■□□□□ 0.26
TSC2-206ENST00000439117 CTSWP56202 376 aa16.69■□□□□ 0.26
TSC2-206ENST00000439117 VWA3BQ502W6 1294 aa16.69■□□□□ 0.26
TSC2-206ENST00000439117 CCDC51Q96ER9 411 aa16.69■□□□□ 0.26
TSC2-206ENST00000439117 TMEM87BQ96K49 555 aa16.69■□□□□ 0.26
TSC2-206ENST00000439117 NOX5Q96PH1 765 aa16.69■□□□□ 0.26
TSC2-206ENST00000439117 UTP11Q9Y3A2 253 aaKnown RBP16.69■□□□□ 0.26
TSC2-206ENST00000439117 ATP6V0A2Q9Y487 856 aa16.69■□□□□ 0.26
TSC2-206ENST00000439117 CPA1P15085 419 aa16.69■□□□□ 0.26
TSC2-206ENST00000439117 RPS6KB1P23443 525 aa16.69■□□□□ 0.26
TSC2-206ENST00000439117 CCDC63Q8NA47 563 aa16.69■□□□□ 0.26
TSC2-206ENST00000439117 USH1CQ9Y6N9 552 aa16.69■□□□□ 0.26
TSC2-206ENST00000439117 ADCY10Q96PN6 1610 aa16.69■□□□□ 0.26
TSC2-206ENST00000439117 B4E1Z4 1266 aa16.68■□□□□ 0.26
TSC2-206ENST00000439117 RXRAP19793 462 aa16.68■□□□□ 0.26
TSC2-206ENST00000439117 TNNI2P48788 182 aa16.68■□□□□ 0.26
TSC2-206ENST00000439117 CERS3Q8IU89 383 aa16.68■□□□□ 0.26
TSC2-206ENST00000439117 ARHGEF2Q92974 986 aaKnown RBP16.68■□□□□ 0.26
TSC2-206ENST00000439117 FAM114A2Q9NRY5 505 aa16.68■□□□□ 0.26
TSC2-206ENST00000439117 MAST3O60307 1309 aa16.68■□□□□ 0.26
TSC2-206ENST00000439117 GNA11P29992 359 aa16.68■□□□□ 0.26
TSC2-206ENST00000439117 CCT6AP40227 531 aaKnown RBP16.68■□□□□ 0.26
TSC2-206ENST00000439117 ZKSCAN3Q9BRR0 538 aa16.68■□□□□ 0.26
TSC2-206ENST00000439117 PLCB1Q9NQ66 1216 aa16.68■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms