RNA–Protein interactions for RNA: ENST00000439106.5

PRAME-209, Transcript of preferentially expressed antigen in melanoma, humanhuman

APPRIS ALT2 TSL 3

Gene PRAME, Length 891 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRAME-209ENST00000439106 PLXNB2O15031 1838 aa16.75■□□□□ 0.27
PRAME-209ENST00000439106 PRKAB2O43741 272 aa16.75■□□□□ 0.27
PRAME-209ENST00000439106 MBD4O95243 580 aa16.75■□□□□ 0.27
PRAME-209ENST00000439106 MYCP01106 439 aaPredicted RBP16.75■□□□□ 0.27
PRAME-209ENST00000439106 CYP2D6P10635 497 aa16.75■□□□□ 0.27
PRAME-209ENST00000439106 PSMC4P43686 418 aa16.75■□□□□ 0.27
PRAME-209ENST00000439106 OTUD7AQ8TE49 926 aaPredicted RBP16.75■□□□□ 0.27
PRAME-209ENST00000439106 CRNKL1Q9BZJ0 848 aaKnown RBP16.75■□□□□ 0.27
PRAME-209ENST00000439106 POTEFA5A3E0 1075 aa16.74■□□□□ 0.27
PRAME-209ENST00000439106 GH2P01242 217 aa16.74■□□□□ 0.27
PRAME-209ENST00000439106 POLR3DP05423 398 aaPredicted RBP16.74■□□□□ 0.27
PRAME-209ENST00000439106 ASNSP08243 561 aa16.74■□□□□ 0.27
PRAME-209ENST00000439106 CERS3Q8IU89 383 aa16.74■□□□□ 0.27
PRAME-209ENST00000439106 PROCA1Q8NCQ7 364 aaPredicted RBP16.74■□□□□ 0.27
PRAME-209ENST00000439106 SMCR8Q8TEV9 937 aaPredicted RBP16.74■□□□□ 0.27
PRAME-209ENST00000439106 SH3TC2Q8TF17 1288 aa16.74■□□□□ 0.27
PRAME-209ENST00000439106 AS3MTQ9HBK9 375 aa16.74■□□□□ 0.27
PRAME-209ENST00000439106 ECHDC1Q9NTX5 307 aa16.74■□□□□ 0.27
PRAME-209ENST00000439106 SERPINB13Q9UIV8 391 aa16.74■□□□□ 0.27
PRAME-209ENST00000439106 SMIM22K7EJ46 135 aa16.73■□□□□ 0.27
PRAME-209ENST00000439106 FMNL1O95466 1100 aaPredicted RBP16.73■□□□□ 0.27
PRAME-209ENST00000439106 OSBPP22059 807 aa16.73■□□□□ 0.27
PRAME-209ENST00000439106 TMED8Q6PL24 325 aaPredicted RBP16.73■□□□□ 0.27
PRAME-209ENST00000439106 ANKRD13CQ8N6S4 541 aa16.73■□□□□ 0.27
PRAME-209ENST00000439106 DDX24Q9GZR7 859 aaKnown RBP eCLIP16.73■□□□□ 0.271e-17■□□□□ 9.1
PRAME-209ENST00000439106 EHD4Q9H223 541 aa16.73■□□□□ 0.27
PRAME-209ENST00000439106 DCP1AQ9NPI6 582 aaPredicted RBP16.73■□□□□ 0.27
PRAME-209ENST00000439106 MCM9Q9NXL9 1143 aa16.73■□□□□ 0.27
PRAME-209ENST00000439106 SLC45A1Q9Y2W3 748 aa16.73■□□□□ 0.27
PRAME-209ENST00000439106 PARP14Q460N5 1801 aa16.73■□□□□ 0.27
PRAME-209ENST00000439106 PEX10O60683 326 aa16.72■□□□□ 0.27
PRAME-209ENST00000439106 SHMT1P34896 483 aa16.72■□□□□ 0.27
PRAME-209ENST00000439106 ARHGEF6Q15052 776 aa16.72■□□□□ 0.27
PRAME-209ENST00000439106 ZYXQ15942 572 aaKnown RBP16.72■□□□□ 0.27
PRAME-209ENST00000439106 SLC9C1Q4G0N8 1177 aa16.72■□□□□ 0.27
PRAME-209ENST00000439106 SH3D19Q5HYK7 790 aa16.72■□□□□ 0.27
PRAME-209ENST00000439106 TATDN1Q6P1N9 297 aa16.72■□□□□ 0.27
PRAME-209ENST00000439106 TTC6Q86TZ1 520 aa16.72■□□□□ 0.27
PRAME-209ENST00000439106 SLC44A5Q8NCS7 719 aa16.72■□□□□ 0.27
PRAME-209ENST00000439106 ARMC5Q96C12 935 aa16.72■□□□□ 0.27
PRAME-209ENST00000439106 WDR18Q9BV38 432 aa16.72■□□□□ 0.27
PRAME-209ENST00000439106 MYPNQ86TC9 1320 aa16.71■□□□□ 0.27
PRAME-209ENST00000439106 CYP2D7A0A087X1C5 515 aa16.71■□□□□ 0.27
PRAME-209ENST00000439106 BACE1P56817 501 aa16.71■□□□□ 0.27
PRAME-209ENST00000439106 PRKCZQ05513 592 aa16.71■□□□□ 0.27
PRAME-209ENST00000439106 RAB3GAP1Q15042 981 aa16.71■□□□□ 0.27
PRAME-209ENST00000439106 DYNLL2Q96FJ2 89 aa16.71■□□□□ 0.27
PRAME-209ENST00000439106 ZNF333Q96JL9 665 aa16.71■□□□□ 0.27
PRAME-209ENST00000439106 TBC1D2Q9BYX2 928 aa16.71■□□□□ 0.27
PRAME-209ENST00000439106 PUS7LQ9H0K6 701 aaKnown RBP16.71■□□□□ 0.27
PRAME-209ENST00000439106 ASCC2Q9H1I8 757 aaPredicted RBP16.71■□□□□ 0.27
PRAME-209ENST00000439106 SRRDQ9UH36 339 aa16.71■□□□□ 0.27
PRAME-209ENST00000439106 GABRQQ9UN88 632 aa16.71■□□□□ 0.27
PRAME-209ENST00000439106 MKI67P46013 3256 aaKnown RBP16.71■□□□□ 0.26
PRAME-209ENST00000439106 MYH4Q9Y623 1939 aa16.7■□□□□ 0.26
PRAME-209ENST00000439106 FCGRTP55899 365 aa16.7■□□□□ 0.26
PRAME-209ENST00000439106 ABCB5Q2M3G0 1257 aa16.7■□□□□ 0.26
PRAME-209ENST00000439106 CERKLQ49MI3 558 aaPredicted RBP16.7■□□□□ 0.26
PRAME-209ENST00000439106 TMOD4Q9NZQ9 345 aa16.7■□□□□ 0.26
PRAME-209ENST00000439106 PNMA3Q9UL41 463 aa16.7■□□□□ 0.26
PRAME-209ENST00000439106 RLFQ13129 1914 aa16.7■□□□□ 0.26
PRAME-209ENST00000439106 GREB1LQ9C091 1923 aaPredicted RBP16.69■□□□□ 0.26
PRAME-209ENST00000439106 COL11A1P12107 1806 aaPredicted RBP16.69■□□□□ 0.26
PRAME-209ENST00000439106 USP17L10C9JJH3 530 aa16.69■□□□□ 0.26
PRAME-209ENST00000439106 GUCY1A2P33402 732 aa16.69■□□□□ 0.26
PRAME-209ENST00000439106 GABPAQ06546 454 aa16.69■□□□□ 0.26
PRAME-209ENST00000439106 UBE3CQ15386 1083 aa16.69■□□□□ 0.26
PRAME-209ENST00000439106 ACER1Q8TDN7 264 aa16.69■□□□□ 0.26
PRAME-209ENST00000439106 GPATCH3Q96I76 525 aa16.69■□□□□ 0.26
PRAME-209ENST00000439106 SLC4A4Q9Y6R1 1079 aa16.69■□□□□ 0.26
PRAME-209ENST00000439106 GNRH1P01148 92 aa16.68■□□□□ 0.26
PRAME-209ENST00000439106 SEPT2Q15019 361 aa16.68■□□□□ 0.26
PRAME-209ENST00000439106 CLEC10AQ8IUN9 316 aa16.68■□□□□ 0.26
PRAME-209ENST00000439106 KBTBD3Q8NAB2 608 aa16.68■□□□□ 0.26
PRAME-209ENST00000439106 PI4K2BQ8TCG2 481 aa16.68■□□□□ 0.26
PRAME-209ENST00000439106 RAET1EQ8TD07 263 aa16.68■□□□□ 0.26
PRAME-209ENST00000439106 FEZ1Q99689 392 aa16.68■□□□□ 0.26
PRAME-209ENST00000439106 EMILIN3Q9NT22 766 aa16.68■□□□□ 0.26
PRAME-209ENST00000439106 C19orf81C9J6K1 198 aa16.67■□□□□ 0.26
PRAME-209ENST00000439106 MPHOSPH10O00566 681 aaKnown RBP16.67■□□□□ 0.26
PRAME-209ENST00000439106 TNPO2O14787 897 aaKnown RBP16.67■□□□□ 0.26
PRAME-209ENST00000439106 EN2P19622 333 aaPredicted RBP16.67■□□□□ 0.26
PRAME-209ENST00000439106 IRX3P78415 501 aaPredicted RBP16.67■□□□□ 0.26
PRAME-209ENST00000439106 PABPC4Q13310 644 aaKnown RBP eCLIP16.67■□□□□ 0.26
PRAME-209ENST00000439106 MTFR1Q15390 333 aa16.67■□□□□ 0.26
PRAME-209ENST00000439106 FAM110CQ1W6H9 321 aa16.67■□□□□ 0.26
PRAME-209ENST00000439106 OSBP2Q969R2 916 aa16.67■□□□□ 0.26
PRAME-209ENST00000439106 P2RX7Q99572 595 aaKnown RBP16.67■□□□□ 0.26
PRAME-209ENST00000439106 GINM1Q9NU53 330 aa16.67■□□□□ 0.26
PRAME-209ENST00000439106 USP17L12C9JPN9 530 aa16.66■□□□□ 0.26
PRAME-209ENST00000439106 USP17L21D6R901 530 aa16.66■□□□□ 0.26
PRAME-209ENST00000439106 HOXD10P28358 340 aa16.66■□□□□ 0.26
PRAME-209ENST00000439106 ANKRD45Q5TZF3 282 aa16.66■□□□□ 0.26
PRAME-209ENST00000439106 ZSCAN25Q6NSZ9 544 aa16.66■□□□□ 0.26
PRAME-209ENST00000439106 NBPF11Q86T75 865 aa16.66■□□□□ 0.26
PRAME-209ENST00000439106 CABP5Q9NP86 173 aa16.66■□□□□ 0.26
PRAME-209ENST00000439106 ATP8A2Q9NTI2 1148 aa16.66■□□□□ 0.26
PRAME-209ENST00000439106 TAOK2Q9UL54 1235 aa16.66■□□□□ 0.26
PRAME-209ENST00000439106 TTC41PQ6P2S7 1318 aa16.66■□□□□ 0.26
PRAME-209ENST00000439106 SALL3Q9BXA9 1300 aa16.66■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms