RNA–Protein interactions for RNA: ENST00000438964.6

ACTN1-204, Transcript of actinin alpha 1, humanhuman

TSL 1 (best) BASIC

Gene ACTN1, Length 3,043 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-204ENST00000438964 CABP5Q9NP86 173 aa15.17■□□□□ 0.02
ACTN1-204ENST00000438964 SMARCAL1Q9NZC9 954 aa15.17■□□□□ 0.02
ACTN1-204ENST00000438964 ANGEL1Q9UNK9 670 aaKnown RBP15.17■□□□□ 0.02
ACTN1-204ENST00000438964 ANKARQ7Z5J8 1434 aa15.17■□□□□ 0.02
ACTN1-204ENST00000438964 N4BP3O15049 544 aa15.17■□□□□ 0.02
ACTN1-204ENST00000438964 USP5P45974 858 aa15.17■□□□□ 0.02
ACTN1-204ENST00000438964 ENOX1Q8TC92 643 aaKnown RBP15.17■□□□□ 0.02
ACTN1-204ENST00000438964 NUP133Q8WUM0 1156 aa15.17■□□□□ 0.02
ACTN1-204ENST00000438964 HNRNPLLQ8WVV9 542 aaKnown RBP15.17■□□□□ 0.02
ACTN1-204ENST00000438964 SECISBP2LQ93073 1101 aaKnown RBP15.17■□□□□ 0.02
ACTN1-204ENST00000438964 SYNRGQ9UMZ2 1314 aa15.17■□□□□ 0.02
ACTN1-204ENST00000438964 A0A1B0GTH6 734 aa15.17■□□□□ 0.02
ACTN1-204ENST00000438964 ZBTB43O43298 467 aa15.17■□□□□ 0.02
ACTN1-204ENST00000438964 FOXO4P98177 505 aa15.17■□□□□ 0.02
ACTN1-204ENST00000438964 MORC3Q14149 939 aa15.17■□□□□ 0.02
ACTN1-204ENST00000438964 EZH2Q15910 746 aaKnown RBP15.17■□□□□ 0.02
ACTN1-204ENST00000438964 APTXQ7Z2E3 356 aaKnown RBP15.17■□□□□ 0.02
ACTN1-204ENST00000438964 TADA2BQ86TJ2 420 aa15.17■□□□□ 0.02
ACTN1-204ENST00000438964 RRP36Q96EU6 259 aaKnown RBP15.16■□□□□ 0.02
ACTN1-204ENST00000438964 NLRP2Q9NX02 1062 aa15.16■□□□□ 0.02
ACTN1-204ENST00000438964 DUSP10Q9Y6W6 482 aa15.16■□□□□ 0.02
ACTN1-204ENST00000438964 TNRQ92752 1358 aa15.16■□□□□ 0.02
ACTN1-204ENST00000438964 WNT7AO00755 349 aa15.16■□□□□ 0.02
ACTN1-204ENST00000438964 PPFIA4O75335 1185 aa15.16■□□□□ 0.02
ACTN1-204ENST00000438964 ARHGAP25P42331 645 aa15.16■□□□□ 0.02
ACTN1-204ENST00000438964 C2orf54Q08AI8 447 aa15.16■□□□□ 0.02
ACTN1-204ENST00000438964 TMEM67Q5HYA8 995 aa15.16■□□□□ 0.02
ACTN1-204ENST00000438964 SYNE4Q8N205 404 aa15.16■□□□□ 0.02
ACTN1-204ENST00000438964 CAGE1Q8TC20 777 aa15.16■□□□□ 0.02
ACTN1-204ENST00000438964 XAGE2Q96GT9 111 aa15.16■□□□□ 0.02
ACTN1-204ENST00000438964 PHF8Q9UPP1 1060 aa15.16■□□□□ 0.02
ACTN1-204ENST00000438964 ARHGEF25Q86VW2 580 aa15.15■□□□□ 0.02
ACTN1-204ENST00000438964 NOSTRINQ8IVI9 506 aa15.15■□□□□ 0.02
ACTN1-204ENST00000438964 CCDC148Q8NFR7 591 aa15.15■□□□□ 0.02
ACTN1-204ENST00000438964 HPCAL4Q9UM19 191 aa15.15■□□□□ 0.02
ACTN1-204ENST00000438964 TOPAZ1Q8N9V7 1692 aa15.15■□□□□ 0.02
ACTN1-204ENST00000438964 DIP2BQ9P265 1576 aa15.15■□□□□ 0.02
ACTN1-204ENST00000438964 ZMYM6O95789 1325 aa15.15■□□□□ 0.02
ACTN1-204ENST00000438964 PRDM1O75626 825 aa15.15■□□□□ 0.02
ACTN1-204ENST00000438964 KRT9P35527 623 aa15.15■□□□□ 0.02
ACTN1-204ENST00000438964 PLCD1P51178 756 aa15.15■□□□□ 0.02
ACTN1-204ENST00000438964 SLC7A5Q01650 507 aa15.15■□□□□ 0.02
ACTN1-204ENST00000438964 RASGRP2Q7LDG7 609 aa15.15■□□□□ 0.02
ACTN1-204ENST00000438964 TTC5Q8N0Z6 440 aa15.15■□□□□ 0.02
ACTN1-204ENST00000438964 MLKLQ8NB16 471 aa15.15■□□□□ 0.02
ACTN1-204ENST00000438964 FBXO2Q9UK22 296 aaPredicted RBP15.15■□□□□ 0.02
ACTN1-204ENST00000438964 ERLIN2O94905 339 aa15.14■□□□□ 0.01
ACTN1-204ENST00000438964 STIM1Q13586 685 aa15.14■□□□□ 0.01
ACTN1-204ENST00000438964 RABL6Q3YEC7 729 aaPredicted RBP15.14■□□□□ 0.01
ACTN1-204ENST00000438964 KCTD16Q68DU8 428 aa15.14■□□□□ 0.01
ACTN1-204ENST00000438964 HDAC7Q8WUI4 952 aa15.14■□□□□ 0.01
ACTN1-204ENST00000438964 FAM212AQ96EL1 285 aa15.14■□□□□ 0.01
ACTN1-204ENST00000438964 PANX2Q96RD6 677 aa15.14■□□□□ 0.01
ACTN1-204ENST00000438964 FAM217BQ9NTX9 383 aaPredicted RBP15.14■□□□□ 0.01
ACTN1-204ENST00000438964 ADD3Q9UEY8 706 aaKnown RBP15.14■□□□□ 0.01
ACTN1-204ENST00000438964 EID1Q9Y6B2 187 aa15.14■□□□□ 0.01
ACTN1-204ENST00000438964 KDM3BQ7LBC6 1761 aa15.14■□□□□ 0.01
ACTN1-204ENST00000438964 MACROD2A1Z1Q3 448 aa15.14■□□□□ 0.01
ACTN1-204ENST00000438964 ATP1A2P50993 1020 aa15.14■□□□□ 0.01
ACTN1-204ENST00000438964 DNA2P51530 1060 aa15.14■□□□□ 0.01
ACTN1-204ENST00000438964 BCAS4Q8TDM0 211 aa15.14■□□□□ 0.01
ACTN1-204ENST00000438964 CRACR2AQ9BSW2 395 aa15.14■□□□□ 0.01
ACTN1-204ENST00000438964 GNL3LQ9NVN8 582 aaKnown RBP15.14■□□□□ 0.01
ACTN1-204ENST00000438964 EHD2Q9NZN4 543 aa15.14■□□□□ 0.01
ACTN1-204ENST00000438964 SMIM22K7EJ46 135 aa15.14■□□□□ 0.01
ACTN1-204ENST00000438964 PRPF6O94906 941 aaKnown RBP15.14■□□□□ 0.01
ACTN1-204ENST00000438964 ERCC3P19447 782 aa15.14■□□□□ 0.01
ACTN1-204ENST00000438964 EARS2Q5JPH6 523 aaKnown RBP15.14■□□□□ 0.01
ACTN1-204ENST00000438964 SMCR8Q8TEV9 937 aaPredicted RBP15.14■□□□□ 0.01
ACTN1-204ENST00000438964 FAM107BQ9H098 131 aa15.14■□□□□ 0.01
ACTN1-204ENST00000438964 VPS54Q9P1Q0 977 aa15.14■□□□□ 0.01
ACTN1-204ENST00000438964 CEP126Q9P2H0 1117 aa15.14■□□□□ 0.01
ACTN1-204ENST00000438964 MKRN1Q9UHC7 482 aaKnown RBP15.14■□□□□ 0.01
ACTN1-204ENST00000438964 FAM169AQ9Y6X4 670 aa15.14■□□□□ 0.01
ACTN1-204ENST00000438964 SNAP23O00161 211 aa15.13■□□□□ 0.01
ACTN1-204ENST00000438964 IFIT3O14879 490 aaKnown RBP15.13■□□□□ 0.01
ACTN1-204ENST00000438964 ACTN4O43707 911 aaKnown RBP15.13■□□□□ 0.01
ACTN1-204ENST00000438964 MYCBPQ99417 103 aaPredicted RBP15.13■□□□□ 0.01
ACTN1-204ENST00000438964 REXO2Q9Y3B8 237 aaKnown RBP15.13■□□□□ 0.01
ACTN1-204ENST00000438964 MYO1FO00160 1098 aa15.13■□□□□ 0.01
ACTN1-204ENST00000438964 EYA2O00167 538 aa15.13■□□□□ 0.01
ACTN1-204ENST00000438964 ECM2O94769 699 aaPredicted RBP15.13■□□□□ 0.01
ACTN1-204ENST00000438964 ATP2B2Q01814 1243 aa15.13■□□□□ 0.01
ACTN1-204ENST00000438964 CYP27A1Q02318 531 aa15.13■□□□□ 0.01
ACTN1-204ENST00000438964 KRT31Q15323 416 aa15.13■□□□□ 0.01
ACTN1-204ENST00000438964 AMOTQ4VCS5 1084 aa15.13■□□□□ 0.01
ACTN1-204ENST00000438964 NCAPGQ9BPX3 1015 aa15.13■□□□□ 0.01
ACTN1-204ENST00000438964 ABHD10Q9NUJ1 306 aa15.13■□□□□ 0.01
ACTN1-204ENST00000438964 CDHR2Q9BYE9 1310 aa15.12■□□□□ 0.01
ACTN1-204ENST00000438964 PDE2AO00408 941 aaPredicted RBP15.12■□□□□ 0.01
ACTN1-204ENST00000438964 SH2B2O14492 632 aaPredicted RBP15.12■□□□□ 0.01
ACTN1-204ENST00000438964 ZPR1O75312 459 aa15.12■□□□□ 0.01
ACTN1-204ENST00000438964 GCP02774 474 aa15.12■□□□□ 0.01
ACTN1-204ENST00000438964 CXCR5P32302 372 aa15.12■□□□□ 0.01
ACTN1-204ENST00000438964 SSRP1Q08945 709 aaKnown RBP15.12■□□□□ 0.01
ACTN1-204ENST00000438964 NTRK3Q16288 839 aa15.12■□□□□ 0.01
ACTN1-204ENST00000438964 CPLX2Q6PUV4 134 aaKnown RBP15.12■□□□□ 0.01
ACTN1-204ENST00000438964 SH2D3CQ8N5H7 860 aa15.12■□□□□ 0.01
ACTN1-204ENST00000438964 SELENOOQ9BVL4 669 aa15.12■□□□□ 0.01
ACTN1-204ENST00000438964 WWC3Q9ULE0 1092 aa15.12■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 60.4 ms