RNA–Protein interactions for RNA: ENST00000438700.7

PTCHD3-201, Transcript of patched domain containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTCHD3, Length 2,529 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCHD3-201ENST00000438700 CRNKL1Q9BZJ0 848 aaKnown RBP16.05■□□□□ 0.16
PTCHD3-201ENST00000438700 NRBP1Q9UHY1 535 aa16.05■□□□□ 0.16
PTCHD3-201ENST00000438700 CYP2D7A0A087X1C5 515 aa16.05■□□□□ 0.16
PTCHD3-201ENST00000438700 GOLGA8AA7E2F4 631 aa16.05■□□□□ 0.16
PTCHD3-201ENST00000438700 RIMBP2O15034 1052 aa16.05■□□□□ 0.16
PTCHD3-201ENST00000438700 DIXDC1Q155Q3 683 aa16.05■□□□□ 0.16
PTCHD3-201ENST00000438700 BRAPQ7Z569 592 aa16.05■□□□□ 0.16
PTCHD3-201ENST00000438700 C2CD5Q86YS7 1000 aa16.05■□□□□ 0.16
PTCHD3-201ENST00000438700 MYH2Q9UKX2 1941 aa16.05■□□□□ 0.16
PTCHD3-201ENST00000438700 SPTLC2O15270 562 aa16.04■□□□□ 0.16
PTCHD3-201ENST00000438700 CTAGE5O15320 804 aa16.04■□□□□ 0.16
PTCHD3-201ENST00000438700 SF3B2Q13435 895 aaKnown RBP16.04■□□□□ 0.16
PTCHD3-201ENST00000438700 STX1AQ16623 288 aa16.04■□□□□ 0.16
PTCHD3-201ENST00000438700 RNF41Q9H4P4 317 aaPredicted RBP16.04■□□□□ 0.16
PTCHD3-201ENST00000438700 POLR3EQ9NVU0 708 aa16.04■□□□□ 0.16
PTCHD3-201ENST00000438700 ANAPC4Q9UJX5 808 aa16.04■□□□□ 0.16
PTCHD3-201ENST00000438700 A0A0U1RQG5 324 aaPredicted RBP16.04■□□□□ 0.16
PTCHD3-201ENST00000438700 GOLGA6L6A8MZA4 724 aa16.04■□□□□ 0.16
PTCHD3-201ENST00000438700 RANBP6O60518 1105 aaKnown RBP16.04■□□□□ 0.16
PTCHD3-201ENST00000438700 BAG6P46379 1132 aa16.04■□□□□ 0.16
PTCHD3-201ENST00000438700 FMR1NBQ8N0W7 255 aaPredicted RBP16.04■□□□□ 0.16
PTCHD3-201ENST00000438700 KCNG4Q8TDN1 519 aa16.04■□□□□ 0.16
PTCHD3-201ENST00000438700 SDF4Q9BRK5 362 aa16.04■□□□□ 0.16
PTCHD3-201ENST00000438700 LAMB1P07942 1786 aa16.04■□□□□ 0.16
PTCHD3-201ENST00000438700 CDKL5O76039 1030 aa16.03■□□□□ 0.16
PTCHD3-201ENST00000438700 MARCKSP29966 332 aaPredicted RBP16.03■□□□□ 0.16
PTCHD3-201ENST00000438700 KRT40Q6A162 431 aa16.03■□□□□ 0.16
PTCHD3-201ENST00000438700 CTR9Q6PD62 1173 aa16.03■□□□□ 0.16
PTCHD3-201ENST00000438700 CPLX2Q6PUV4 134 aaKnown RBP16.03■□□□□ 0.16
PTCHD3-201ENST00000438700 DPP8Q6V1X1 898 aaPredicted RBP16.03■□□□□ 0.16
PTCHD3-201ENST00000438700 PDGFDQ9GZP0 370 aaPredicted RBP16.03■□□□□ 0.16
PTCHD3-201ENST00000438700 DCP1AQ9NPI6 582 aaPredicted RBP16.03■□□□□ 0.16
PTCHD3-201ENST00000438700 SLC12A7Q9Y666 1083 aa16.03■□□□□ 0.16
PTCHD3-201ENST00000438700 USP17L12C9JPN9 530 aa16.03■□□□□ 0.16
PTCHD3-201ENST00000438700 USP17L21D6R901 530 aa16.03■□□□□ 0.16
PTCHD3-201ENST00000438700 GOLGA6L19H0YKK7 550 aa16.03■□□□□ 0.16
PTCHD3-201ENST00000438700 ZNF75DP51815 510 aa16.03■□□□□ 0.16
PTCHD3-201ENST00000438700 GSTO1P78417 241 aa16.03■□□□□ 0.16
PTCHD3-201ENST00000438700 GNL2Q13823 731 aaKnown RBP16.03■□□□□ 0.16
PTCHD3-201ENST00000438700 ANO1Q5XXA6 986 aa16.03■□□□□ 0.16
PTCHD3-201ENST00000438700 FAM217BQ9NTX9 383 aaPredicted RBP16.03■□□□□ 0.16
PTCHD3-201ENST00000438700 CCDC69A6NI79 296 aa16.02■□□□□ 0.16
PTCHD3-201ENST00000438700 H0YIN7 160 aa16.02■□□□□ 0.16
PTCHD3-201ENST00000438700 YEATS4O95619 227 aa16.02■□□□□ 0.16
PTCHD3-201ENST00000438700 IARSP41252 1262 aaKnown RBP16.02■□□□□ 0.16
PTCHD3-201ENST00000438700 IQCB1Q15051 598 aa16.02■□□□□ 0.16
PTCHD3-201ENST00000438700 NTRK3Q16288 839 aa16.02■□□□□ 0.16
PTCHD3-201ENST00000438700 MFSD14BQ5SR56 506 aa16.02■□□□□ 0.16
PTCHD3-201ENST00000438700 CCDC186Q7Z3E2 898 aa16.02■□□□□ 0.16
PTCHD3-201ENST00000438700 SGMS1Q86VZ5 419 aa16.02■□□□□ 0.16
PTCHD3-201ENST00000438700 C16orf45Q96MC5 204 aaPredicted RBP16.02■□□□□ 0.16
PTCHD3-201ENST00000438700 EVX2Q03828 476 aa16.02■□□□□ 0.15
PTCHD3-201ENST00000438700 PLA2G4DQ86XP0 818 aa16.02■□□□□ 0.15
PTCHD3-201ENST00000438700 CCDC82Q8N4S0 544 aa16.02■□□□□ 0.15
PTCHD3-201ENST00000438700 ANKRD7Q92527 254 aa16.02■□□□□ 0.15
PTCHD3-201ENST00000438700 SLC26A6Q9BXS9 759 aa16.02■□□□□ 0.15
PTCHD3-201ENST00000438700 TMX4Q9H1E5 349 aaPredicted RBP16.02■□□□□ 0.15
PTCHD3-201ENST00000438700 ATP8A2Q9NTI2 1148 aa16.02■□□□□ 0.15
PTCHD3-201ENST00000438700 SLX4Q8IY92 1834 aa16.01■□□□□ 0.15
PTCHD3-201ENST00000438700 A0A1W2PQ27 194 aa16.01■□□□□ 0.15
PTCHD3-201ENST00000438700 A0A1W2PQ64 194 aa16.01■□□□□ 0.15
PTCHD3-201ENST00000438700 A0A1W2PQD8 194 aa16.01■□□□□ 0.15
PTCHD3-201ENST00000438700 CHRNA5P30532 468 aa16.01■□□□□ 0.15
PTCHD3-201ENST00000438700 SH3RF3Q8TEJ3 882 aaPredicted RBP16.01■□□□□ 0.15
PTCHD3-201ENST00000438700 ZC3H12CQ9C0D7 883 aaKnown RBP16.01■□□□□ 0.15
PTCHD3-201ENST00000438700 MROH7-TTC4A0A0A0MT08 1334 aa16.01■□□□□ 0.15
PTCHD3-201ENST00000438700 BECN2A8MW95 431 aa16.01■□□□□ 0.15
PTCHD3-201ENST00000438700 STYK1Q6J9G0 422 aa16.01■□□□□ 0.15
PTCHD3-201ENST00000438700 CMTR1Q8N1G2 835 aaKnown RBP16.01■□□□□ 0.15
PTCHD3-201ENST00000438700 COA1Q9GZY4 146 aa16.01■□□□□ 0.15
PTCHD3-201ENST00000438700 ECM29Q5VYK3 1845 aa16.01■□□□□ 0.15
PTCHD3-201ENST00000438700 CAVIN2O95810 425 aa16■□□□□ 0.15
PTCHD3-201ENST00000438700 LIFRP42702 1097 aa16■□□□□ 0.15
PTCHD3-201ENST00000438700 GTF2IP78347 998 aa16■□□□□ 0.15
PTCHD3-201ENST00000438700 CTIFO43310 598 aaKnown RBP16■□□□□ 0.15
PTCHD3-201ENST00000438700 PRDM1O75626 825 aa16■□□□□ 0.15
PTCHD3-201ENST00000438700 WDHD1O75717 1129 aaPredicted RBP16■□□□□ 0.15
PTCHD3-201ENST00000438700 BAG3O95817 575 aa16■□□□□ 0.15
PTCHD3-201ENST00000438700 LDHCP07864 332 aa16■□□□□ 0.15
PTCHD3-201ENST00000438700 CYP2D6P10635 497 aa16■□□□□ 0.15
PTCHD3-201ENST00000438700 SART3Q15020 963 aaKnown RBP16■□□□□ 0.15
PTCHD3-201ENST00000438700 TBC1D22AQ8WUA7 517 aa16■□□□□ 0.15
PTCHD3-201ENST00000438700 ESR2Q92731 530 aa16■□□□□ 0.15
PTCHD3-201ENST00000438700 NOL10Q9BSC4 688 aaKnown RBP16■□□□□ 0.15
PTCHD3-201ENST00000438700 RTFDC1Q9BY42 306 aaPredicted RBP16■□□□□ 0.15
PTCHD3-201ENST00000438700 ANO10Q9NW15 660 aa16■□□□□ 0.15
PTCHD3-201ENST00000438700 CLIP2Q9UDT6 1046 aa16■□□□□ 0.15
PTCHD3-201ENST00000438700 FAM205AQ6ZU69 1335 aa16■□□□□ 0.15
PTCHD3-201ENST00000438700 TPM3P06753 285 aa15.99■□□□□ 0.15
PTCHD3-201ENST00000438700 GUCY1A2P33402 732 aa15.99■□□□□ 0.15
PTCHD3-201ENST00000438700 NCBP1Q09161 790 aaKnown RBP15.99■□□□□ 0.15
PTCHD3-201ENST00000438700 TRIM29Q14134 588 aa15.99■□□□□ 0.15
PTCHD3-201ENST00000438700 DOK7Q18PE1 504 aa15.99■□□□□ 0.15
PTCHD3-201ENST00000438700 AXDND1Q5T1B0 1012 aaPredicted RBP15.99■□□□□ 0.15
PTCHD3-201ENST00000438700 DHX40Q8IX18 779 aaKnown RBP15.99■□□□□ 0.15
PTCHD3-201ENST00000438700 ZNF219Q9P2Y4 722 aaPredicted RBP15.99■□□□□ 0.15
PTCHD3-201ENST00000438700 ARPP21Q9UBL0 812 aaPredicted RBP15.99■□□□□ 0.15
PTCHD3-201ENST00000438700 NAV1Q8NEY1 1877 aa15.99■□□□□ 0.15
PTCHD3-201ENST00000438700 CDK5RAP2Q96SN8 1893 aa15.99■□□□□ 0.15
PTCHD3-201ENST00000438700 BIN1O00499 593 aa15.99■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 12.4 ms