RNA–Protein interactions for RNA: ENST00000438191.1

RPE-209, Transcript of ribulose-5-phosphate-3-epimerase, humanhuman

TSL 5

Gene RPE, Length 426 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPE-209ENST00000438191 PROB1E7EW31 1015 aa11.76□□□□□ -0.53
RPE-209ENST00000438191 MYCNP04198 464 aaPredicted RBP11.76□□□□□ -0.53
RPE-209ENST00000438191 ACRP10323 421 aa11.76□□□□□ -0.53
RPE-209ENST00000438191 CYBAP13498 195 aa11.76□□□□□ -0.53
RPE-209ENST00000438191 RABGGTBP53611 331 aa11.76□□□□□ -0.53
RPE-209ENST00000438191 HDGFL1Q5TGJ6 251 aa11.76□□□□□ -0.53
RPE-209ENST00000438191 PLEKHH3Q7Z736 793 aa11.76□□□□□ -0.53
RPE-209ENST00000438191 GPRC5AQ8NFJ5 357 aa11.76□□□□□ -0.53
RPE-209ENST00000438191 GADD45GIP1Q8TAE8 222 aaPredicted RBP11.76□□□□□ -0.53
RPE-209ENST00000438191 MRIQ9BWK5 157 aa11.76□□□□□ -0.53
RPE-209ENST00000438191 BABAM1Q9NWV8 329 aa11.76□□□□□ -0.53
RPE-209ENST00000438191 PHF24Q9UPV7 400 aa11.76□□□□□ -0.53
RPE-209ENST00000438191 TECTAO75443 2155 aa11.75□□□□□ -0.53
RPE-209ENST00000438191 FAM186AA6NE01 2351 aa11.75□□□□□ -0.53
RPE-209ENST00000438191 IGHA2P01877 340 aa11.75□□□□□ -0.53
RPE-209ENST00000438191 CSF2RAP15509 400 aa11.75□□□□□ -0.53
RPE-209ENST00000438191 CYP2C19P33261 490 aa11.75□□□□□ -0.53
RPE-209ENST00000438191 GOLGA2Q08379 1002 aa11.75□□□□□ -0.53
RPE-209ENST00000438191 NFE2L2Q16236 605 aa11.75□□□□□ -0.53
RPE-209ENST00000438191 Q3C1V9 767 aa11.75□□□□□ -0.53
RPE-209ENST00000438191 LEXMQ3ZCV2 418 aa11.75□□□□□ -0.53
RPE-209ENST00000438191 BMP8AQ7Z5Y6 402 aa11.75□□□□□ -0.53
RPE-209ENST00000438191 TBX21Q9UL17 535 aa11.75□□□□□ -0.53
RPE-209ENST00000438191 PCDHA11Q9Y5I1 949 aa11.75□□□□□ -0.53
RPE-209ENST00000438191 CHD6Q8TD26 2715 aa11.75□□□□□ -0.53
RPE-209ENST00000438191 TPRP12270 2363 aaKnown RBP11.75□□□□□ -0.53
RPE-209ENST00000438191 SOWAHBA6NEL2 793 aa11.74□□□□□ -0.53
RPE-209ENST00000438191 EPHA10Q5JZY3 1008 aa11.74□□□□□ -0.53
RPE-209ENST00000438191 ANKRD33Q7Z3H0 272 aa11.74□□□□□ -0.53
RPE-209ENST00000438191 TOX2Q96NM4 488 aa11.74□□□□□ -0.53
RPE-209ENST00000438191 UBE2ZQ9H832 354 aaPredicted RBP11.74□□□□□ -0.53
RPE-209ENST00000438191 RBPJLQ9UBG7 517 aa11.74□□□□□ -0.53
RPE-209ENST00000438191 TRPC6Q9Y210 931 aa11.74□□□□□ -0.53
RPE-209ENST00000438191 RIF1Q5UIP0 2472 aaKnown RBP11.74□□□□□ -0.53
RPE-209ENST00000438191 CFAP47Q6ZTR5 3102 aa11.73□□□□□ -0.53
RPE-209ENST00000438191 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP11.73□□□□□ -0.53
RPE-209ENST00000438191 PRR23AA6NEV1 266 aa11.73□□□□□ -0.53
RPE-209ENST00000438191 DCDC2CA8MYV0 355 aa11.73□□□□□ -0.53
RPE-209ENST00000438191 CTNND1O60716 968 aaKnown RBP11.73□□□□□ -0.53
RPE-209ENST00000438191 CACNA1HO95180 2353 aa11.73□□□□□ -0.53
RPE-209ENST00000438191 SLC4A2P04920 1241 aa11.73□□□□□ -0.53
RPE-209ENST00000438191 HMGCS2P54868 508 aa11.73□□□□□ -0.53
RPE-209ENST00000438191 ATP2B2Q01814 1243 aa11.73□□□□□ -0.53
RPE-209ENST00000438191 NFIAQ12857 509 aa11.73□□□□□ -0.53
RPE-209ENST00000438191 ATOH1Q92858 354 aaPredicted RBP11.73□□□□□ -0.53
RPE-209ENST00000438191 MTIF3Q9H2K0 278 aaKnown RBP11.73□□□□□ -0.53
RPE-209ENST00000438191 CERS4Q9HA82 394 aa11.73□□□□□ -0.53
RPE-209ENST00000438191 FAM198AQ9UFP1 575 aa11.73□□□□□ -0.53
RPE-209ENST00000438191 LRRFIP2Q9Y608 721 aaKnown RBP11.73□□□□□ -0.53
RPE-209ENST00000438191 MYO15AQ9UKN7 3530 aa11.73□□□□□ -0.53
RPE-209ENST00000438191 SEPT4O43236 478 aa11.72□□□□□ -0.53
RPE-209ENST00000438191 HOXC6P09630 235 aa11.72□□□□□ -0.53
RPE-209ENST00000438191 ERVK-9P63128 1117 aa11.72□□□□□ -0.53
RPE-209ENST00000438191 ERVK-24P63145 666 aa11.72□□□□□ -0.53
RPE-209ENST00000438191 MAP3K10Q02779 954 aa11.72□□□□□ -0.53
RPE-209ENST00000438191 SPP2Q13103 211 aa11.72□□□□□ -0.53
RPE-209ENST00000438191 ACAP1Q15027 740 aa11.72□□□□□ -0.53
RPE-209ENST00000438191 PTCRAQ6ISU1 281 aaPredicted RBP11.72□□□□□ -0.53
RPE-209ENST00000438191 HHIPL2Q6UWX4 724 aa11.72□□□□□ -0.53
RPE-209ENST00000438191 ZFPM1Q8IX07 1006 aa11.72□□□□□ -0.53
RPE-209ENST00000438191 CCAR1Q8IX12 1150 aaKnown RBP11.72□□□□□ -0.53
RPE-209ENST00000438191 TMEM199Q8N511 208 aa11.72□□□□□ -0.53
RPE-209ENST00000438191 NPLOC4Q8TAT6 608 aa11.72□□□□□ -0.53
RPE-209ENST00000438191 METTL22Q9BUU2 404 aaPredicted RBP11.72□□□□□ -0.53
RPE-209ENST00000438191 IRF2BPLQ9H1B7 796 aa11.72□□□□□ -0.53
RPE-209ENST00000438191 PHAXQ9H814 394 aaKnown RBP11.72□□□□□ -0.53
RPE-209ENST00000438191 COL4A4P53420 1690 aaPredicted RBP11.71□□□□□ -0.53
RPE-209ENST00000438191 GRXCR2A6NFK2 248 aa11.71□□□□□ -0.53
RPE-209ENST00000438191 SLURP2P0DP57 97 aa11.71□□□□□ -0.53
RPE-209ENST00000438191 HIBADHP31937 336 aaKnown RBP11.71□□□□□ -0.53
RPE-209ENST00000438191 GYG1P46976 350 aa11.71□□□□□ -0.53
RPE-209ENST00000438191 HERVK_113P62684 666 aa11.71□□□□□ -0.53
RPE-209ENST00000438191 IRX3P78415 501 aaPredicted RBP11.71□□□□□ -0.53
RPE-209ENST00000438191 PKN1Q16512 942 aa11.71□□□□□ -0.53
RPE-209ENST00000438191 SH3D19Q5HYK7 790 aa11.71□□□□□ -0.53
RPE-209ENST00000438191 FAM47AQ5JRC9 791 aa11.71□□□□□ -0.53
RPE-209ENST00000438191 FAM84BQ96KN1 310 aaPredicted RBP11.71□□□□□ -0.53
RPE-209ENST00000438191 XPO5Q9HAV4 1204 aaKnown RBP eCLIP11.71□□□□□ -0.53
RPE-209ENST00000438191 IL23AQ9NPF7 189 aa11.71□□□□□ -0.53
RPE-209ENST00000438191 NCOR2Q9Y618 2525 aa11.71□□□□□ -0.53
RPE-209ENST00000438191 A0A1W2PQ45 241 aaPredicted RBP11.7□□□□□ -0.54
RPE-209ENST00000438191 A0A1W2PQY0 241 aa11.7□□□□□ -0.54
RPE-209ENST00000438191 C19orf67A6NJJ6 358 aa11.7□□□□□ -0.54
RPE-209ENST00000438191 FGBP02675 491 aa11.7□□□□□ -0.54
RPE-209ENST00000438191 NEFMP07197 916 aa11.7□□□□□ -0.54
RPE-209ENST00000438191 CSF1RP07333 972 aa11.7□□□□□ -0.54
RPE-209ENST00000438191 GRB10Q13322 594 aa11.7□□□□□ -0.54
RPE-209ENST00000438191 CDC42EP5Q6NZY7 148 aa11.7□□□□□ -0.54
RPE-209ENST00000438191 TBC1D22AQ8WUA7 517 aa11.7□□□□□ -0.54
RPE-209ENST00000438191 PLEKHF1Q96S99 279 aa11.7□□□□□ -0.54
RPE-209ENST00000438191 TRIOO75962 3097 aa11.7□□□□□ -0.54
RPE-209ENST00000438191 SLC15A5A6NIM6 579 aa11.69□□□□□ -0.54
RPE-209ENST00000438191 APBB1O00213 710 aa11.69□□□□□ -0.54
RPE-209ENST00000438191 IGKV5-2P06315 115 aa11.69□□□□□ -0.54
RPE-209ENST00000438191 CA3P07451 260 aa11.69□□□□□ -0.54
RPE-209ENST00000438191 HOXB7P09629 217 aa11.69□□□□□ -0.54
RPE-209ENST00000438191 KCNA5P22460 613 aa11.69□□□□□ -0.54
RPE-209ENST00000438191 PTPREP23469 700 aa11.69□□□□□ -0.54
RPE-209ENST00000438191 HOXA7P31268 230 aaPredicted RBP11.69□□□□□ -0.54
RPE-209ENST00000438191 ZP2Q05996 745 aa11.69□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms