RNA–Protein interactions for RNA: ENST00000437681.1

SNHG3-202, Transcript of small nucleolar RNA host gene 3, humanhuman

TSL 2 BASIC

Gene SNHG3, Length 2,614 nt, Biotype retained intron, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG3-202ENST00000437681 SH3D19Q5HYK7 790 aa13.65□□□□□ -0.22
SNHG3-202ENST00000437681 TMEM179Q6ZVK1 233 aa13.65□□□□□ -0.22
SNHG3-202ENST00000437681 SDR42E1Q8WUS8 393 aa13.65□□□□□ -0.22
SNHG3-202ENST00000437681 MAP4K1Q92918 833 aa13.65□□□□□ -0.22
SNHG3-202ENST00000437681 CNNM2Q9H8M5 875 aa13.65□□□□□ -0.22
SNHG3-202ENST00000437681 PICK1Q9NRD5 415 aa13.65□□□□□ -0.22
SNHG3-202ENST00000437681 DDX52Q9Y2R4 599 aaKnown RBP eCLIP13.65□□□□□ -0.22
SNHG3-202ENST00000437681 USP17L12C9JPN9 530 aa13.64□□□□□ -0.23
SNHG3-202ENST00000437681 USP17L21D6R901 530 aa13.64□□□□□ -0.23
SNHG3-202ENST00000437681 PRKAB2O43741 272 aa13.64□□□□□ -0.23
SNHG3-202ENST00000437681 SHMT1P34896 483 aa13.64□□□□□ -0.23
SNHG3-202ENST00000437681 GTF2A2P52657 109 aa13.64□□□□□ -0.23
SNHG3-202ENST00000437681 TTLL12Q14166 644 aaPredicted RBP13.64□□□□□ -0.23
SNHG3-202ENST00000437681 SPRYD7Q5W111 196 aa13.64□□□□□ -0.23
SNHG3-202ENST00000437681 CWC27Q6UX04 472 aaKnown RBP13.64□□□□□ -0.23
SNHG3-202ENST00000437681 KIAA1211Q6ZU35 1233 aa13.64□□□□□ -0.23
SNHG3-202ENST00000437681 WRNIP1Q96S55 665 aa13.64□□□□□ -0.23
SNHG3-202ENST00000437681 PALD1Q9ULE6 856 aa13.64□□□□□ -0.23
SNHG3-202ENST00000437681 ABT1Q9ULW3 272 aaKnown RBP13.64□□□□□ -0.23
SNHG3-202ENST00000437681 SRCAPQ6ZRS2 3230 aa13.64□□□□□ -0.23
SNHG3-202ENST00000437681 C19orf81C9J6K1 198 aa13.64□□□□□ -0.23
SNHG3-202ENST00000437681 REC8O95072 547 aa13.64□□□□□ -0.23
SNHG3-202ENST00000437681 TM4SF4P48230 202 aa13.64□□□□□ -0.23
SNHG3-202ENST00000437681 NOVP48745 357 aa13.64□□□□□ -0.23
SNHG3-202ENST00000437681 TSGA10IPQ3SY00 556 aa13.64□□□□□ -0.23
SNHG3-202ENST00000437681 SH2D4AQ9H788 454 aa13.64□□□□□ -0.23
SNHG3-202ENST00000437681 CABP5Q9NP86 173 aa13.64□□□□□ -0.23
SNHG3-202ENST00000437681 USP17L5A8MUK1 530 aa13.63□□□□□ -0.23
SNHG3-202ENST00000437681 ALDH1A1P00352 501 aa13.63□□□□□ -0.23
SNHG3-202ENST00000437681 VGLL4Q14135 290 aa13.63□□□□□ -0.23
SNHG3-202ENST00000437681 IMMTQ16891 758 aaKnown RBP13.63□□□□□ -0.23
SNHG3-202ENST00000437681 ZNF589Q86UQ0 364 aaPredicted RBP13.63□□□□□ -0.23
SNHG3-202ENST00000437681 KCNB2Q92953 911 aa13.63□□□□□ -0.23
SNHG3-202ENST00000437681 C12orf42Q96LP6 360 aa13.63□□□□□ -0.23
SNHG3-202ENST00000437681 SEC62Q99442 399 aaKnown RBP13.63□□□□□ -0.23
SNHG3-202ENST00000437681 DNAJC18Q9H819 358 aa13.63□□□□□ -0.23
SNHG3-202ENST00000437681 FGAP02671 866 aa13.63□□□□□ -0.23
SNHG3-202ENST00000437681 CDK8P49336 464 aa13.63□□□□□ -0.23
SNHG3-202ENST00000437681 CERKLQ49MI3 558 aaPredicted RBP13.63□□□□□ -0.23
SNHG3-202ENST00000437681 DNAJC5GQ8N7S2 189 aa13.63□□□□□ -0.23
SNHG3-202ENST00000437681 IL17RAQ96F46 866 aa13.63□□□□□ -0.23
SNHG3-202ENST00000437681 WDR33Q9C0J8 1336 aaKnown RBP13.63□□□□□ -0.23
SNHG3-202ENST00000437681 PLCD1P51178 756 aa13.62□□□□□ -0.23
SNHG3-202ENST00000437681 USP14P54578 494 aa13.62□□□□□ -0.23
SNHG3-202ENST00000437681 PROCA1Q8NCQ7 364 aaPredicted RBP13.62□□□□□ -0.23
SNHG3-202ENST00000437681 WDR19Q8NEZ3 1342 aa13.62□□□□□ -0.23
SNHG3-202ENST00000437681 IGKV6D-41A0A0C4DH26 115 aa13.62□□□□□ -0.23
SNHG3-202ENST00000437681 APPP05067 770 aa13.62□□□□□ -0.23
SNHG3-202ENST00000437681 CETPP11597 493 aa13.62□□□□□ -0.23
SNHG3-202ENST00000437681 PTPRAP18433 802 aa13.62□□□□□ -0.23
SNHG3-202ENST00000437681 BRD2P25440 801 aaKnown RBP13.62□□□□□ -0.23
SNHG3-202ENST00000437681 ZNF157P51786 506 aaPredicted RBP13.62□□□□□ -0.23
SNHG3-202ENST00000437681 FASTKD5Q7L8L6 764 aaKnown RBP13.62□□□□□ -0.23
SNHG3-202ENST00000437681 GTF3C2Q8WUA4 911 aaPredicted RBP13.62□□□□□ -0.23
SNHG3-202ENST00000437681 CAPNS2Q96L46 248 aa13.62□□□□□ -0.23
SNHG3-202ENST00000437681 KRT23Q9C075 422 aa13.62□□□□□ -0.23
SNHG3-202ENST00000437681 LSG1Q9H089 658 aaKnown RBP13.62□□□□□ -0.23
SNHG3-202ENST00000437681 SAP30BPQ9UHR5 308 aaKnown RBP13.62□□□□□ -0.23
SNHG3-202ENST00000437681 UBE2Q2LH0YL09 131 aa13.61□□□□□ -0.23
SNHG3-202ENST00000437681 SNAPC2Q13487 334 aa13.61□□□□□ -0.23
SNHG3-202ENST00000437681 ABCB5Q2M3G0 1257 aa13.61□□□□□ -0.23
SNHG3-202ENST00000437681 RNF20Q5VTR2 975 aa13.61□□□□□ -0.23
SNHG3-202ENST00000437681 ZNF408Q9H9D4 720 aa13.61□□□□□ -0.23
SNHG3-202ENST00000437681 ZBTB21Q9ULJ3 1066 aa13.61□□□□□ -0.23
SNHG3-202ENST00000437681 AFG3L2Q9Y4W6 797 aa13.61□□□□□ -0.23
SNHG3-202ENST00000437681 ZNF213O14771 459 aa13.61□□□□□ -0.23
SNHG3-202ENST00000437681 MAP2K1Q02750 393 aaPredicted RBP13.61□□□□□ -0.23
SNHG3-202ENST00000437681 OTUD7BQ6GQQ9 843 aa13.61□□□□□ -0.23
SNHG3-202ENST00000437681 RCSD1Q6JBY9 416 aa13.61□□□□□ -0.23
SNHG3-202ENST00000437681 NEDD1Q8NHV4 660 aa13.61□□□□□ -0.23
SNHG3-202ENST00000437681 ANKS1AQ92625 1134 aa13.61□□□□□ -0.23
SNHG3-202ENST00000437681 MKL1Q969V6 931 aa13.61□□□□□ -0.23
SNHG3-202ENST00000437681 KANSL2Q9H9L4 492 aa13.61□□□□□ -0.23
SNHG3-202ENST00000437681 NYAP2Q9P242 653 aa13.61□□□□□ -0.23
SNHG3-202ENST00000437681 A0A0G2JLL6 359 aaPredicted RBP13.6□□□□□ -0.23
SNHG3-202ENST00000437681 SLFNL1Q499Z3 407 aa13.6□□□□□ -0.23
SNHG3-202ENST00000437681 AKNAD1Q5T1N1 836 aa13.6□□□□□ -0.23
SNHG3-202ENST00000437681 PRRT2Q7Z6L0 340 aaPredicted RBP13.6□□□□□ -0.23
SNHG3-202ENST00000437681 ANKRD23Q86SG2 305 aa13.6□□□□□ -0.23
SNHG3-202ENST00000437681 TTC14Q96N46 770 aa13.6□□□□□ -0.23
SNHG3-202ENST00000437681 PABPC4Q13310 644 aaKnown RBP eCLIP13.6□□□□□ -0.23
SNHG3-202ENST00000437681 KRT32Q14532 448 aa13.6□□□□□ -0.23
SNHG3-202ENST00000437681 CCDC129Q6ZRS4 1044 aa13.6□□□□□ -0.23
SNHG3-202ENST00000437681 CDAN1Q8IWY9 1227 aa13.6□□□□□ -0.23
SNHG3-202ENST00000437681 KIAA1683Q9H0B3 1180 aa13.6□□□□□ -0.23
SNHG3-202ENST00000437681 CHGBP05060 677 aa13.6□□□□□ -0.23
SNHG3-202ENST00000437681 RASA1P20936 1047 aa13.6□□□□□ -0.23
SNHG3-202ENST00000437681 PRAMEF18Q5VWM3 479 aa13.6□□□□□ -0.23
SNHG3-202ENST00000437681 ZNF444Q8N0Y2 327 aaPredicted RBP13.6□□□□□ -0.23
SNHG3-202ENST00000437681 ZNF280CQ8ND82 737 aa13.6□□□□□ -0.23
SNHG3-202ENST00000437681 OPTNQ96CV9 577 aa13.6□□□□□ -0.23
SNHG3-202ENST00000437681 USP17L2Q6R6M4 530 aa13.59□□□□□ -0.23
SNHG3-202ENST00000437681 MIGA2Q7L4E1 593 aa13.59□□□□□ -0.23
SNHG3-202ENST00000437681 LPAR1Q92633 364 aa13.59□□□□□ -0.23
SNHG3-202ENST00000437681 MKNK2Q9HBH9 465 aa13.59□□□□□ -0.23
SNHG3-202ENST00000437681 ARHGEF10LQ9HCE6 1279 aa13.59□□□□□ -0.23
SNHG3-202ENST00000437681 FMR1Q06787 632 aaKnown RBP eCLIP13.59□□□□□ -0.231e-323■■■■■ 722.5
SNHG3-202ENST00000437681 VPS53Q5VIR6 699 aa13.59□□□□□ -0.23
SNHG3-202ENST00000437681 MFSD6Q6ZSS7 791 aa13.59□□□□□ -0.23
SNHG3-202ENST00000437681 MYPNQ86TC9 1320 aa13.58□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 47.7 ms