RNA–Protein interactions for RNA: ENST00000437340.5

CPNE1-216, Transcript of copine 1, humanhuman

TSL 1 (best)

Gene CPNE1, Length 1,755 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-216ENST00000437340 DIXDC1Q155Q3 683 aa29.78■■■□□ 2.36
CPNE1-216ENST00000437340 CAMK4Q16566 473 aa29.78■■■□□ 2.36
CPNE1-216ENST00000437340 HS1BP3Q53T59 392 aa29.78■■■□□ 2.36
CPNE1-216ENST00000437340 ANO1Q5XXA6 986 aa29.78■■■□□ 2.36
CPNE1-216ENST00000437340 SLF2Q8IX21 1173 aa29.78■■■□□ 2.36
CPNE1-216ENST00000437340 SH3RF3Q8TEJ3 882 aaPredicted RBP29.78■■■□□ 2.36
CPNE1-216ENST00000437340 RNF26Q9BY78 433 aaPredicted RBP29.78■■■□□ 2.36
CPNE1-216ENST00000437340 MTFR1LQ9H019 292 aa29.78■■■□□ 2.36
CPNE1-216ENST00000437340 PCDHA7Q9UN72 937 aa29.78■■■□□ 2.36
CPNE1-216ENST00000437340 ATF5Q9Y2D1 282 aaPredicted RBP29.78■■■□□ 2.36
CPNE1-216ENST00000437340 CLIC4Q9Y696 253 aa29.78■■■□□ 2.36
CPNE1-216ENST00000437340 ROBO3Q96MS0 1386 aa29.78■■■□□ 2.36
CPNE1-216ENST00000437340 FAM205AQ6ZU69 1335 aa29.78■■■□□ 2.36
CPNE1-216ENST00000437340 C6orf229H3BNL8 230 aa29.77■■■□□ 2.36
CPNE1-216ENST00000437340 SPTLC2O15270 562 aa29.77■■■□□ 2.36
CPNE1-216ENST00000437340 GNL2Q13823 731 aaKnown RBP29.77■■■□□ 2.36
CPNE1-216ENST00000437340 AMOTL1Q8IY63 956 aa29.77■■■□□ 2.36
CPNE1-216ENST00000437340 FAM163AQ96GL9 167 aaPredicted RBP29.77■■■□□ 2.36
CPNE1-216ENST00000437340 RTFDC1Q9BY42 306 aaPredicted RBP29.77■■■□□ 2.36
CPNE1-216ENST00000437340 CYP2D6P10635 497 aa29.77■■■□□ 2.36
CPNE1-216ENST00000437340 FAM160A1Q05DH4 1040 aa29.77■■■□□ 2.36
CPNE1-216ENST00000437340 SF3A1Q15459 793 aaKnown RBP29.77■■■□□ 2.36
CPNE1-216ENST00000437340 GPR75-ASB3A0A0A6YYF3 556 aa29.76■■■□□ 2.35
CPNE1-216ENST00000437340 TROAPQ12815 778 aa29.76■■■□□ 2.35
CPNE1-216ENST00000437340 ENGASEQ8NFI3 743 aa29.76■■■□□ 2.35
CPNE1-216ENST00000437340 GNL3Q9BVP2 549 aaKnown RBP eCLIP29.76■■■□□ 2.35
CPNE1-216ENST00000437340 PSDA5PKW4 1024 aaPredicted RBP29.75■■■□□ 2.35
CPNE1-216ENST00000437340 PLCG2P16885 1265 aa29.75■■■□□ 2.35
CPNE1-216ENST00000437340 TYRO3Q06418 890 aa29.75■■■□□ 2.35
CPNE1-216ENST00000437340 SNW1Q13573 536 aaKnown RBP29.75■■■□□ 2.35
CPNE1-216ENST00000437340 SAFBQ15424 915 aaKnown RBP eCLIP29.75■■■□□ 2.351e-17■■■■□ 20.2
CPNE1-216ENST00000437340 OLFM4Q6UX06 510 aa29.75■■■□□ 2.35
CPNE1-216ENST00000437340 MRPS27Q92552 414 aaKnown RBP29.75■■■□□ 2.35
CPNE1-216ENST00000437340 COA1Q9GZY4 146 aa29.75■■■□□ 2.35
CPNE1-216ENST00000437340 MMP1P03956 469 aa29.75■■■□□ 2.35
CPNE1-216ENST00000437340 USP17L8P0C7I0 530 aa29.75■■■□□ 2.35
CPNE1-216ENST00000437340 FSIP1Q8NA03 581 aa29.75■■■□□ 2.35
CPNE1-216ENST00000437340 GOLPH3LQ9H4A5 285 aa29.75■■■□□ 2.35
CPNE1-216ENST00000437340 GUCY1A2P33402 732 aa29.74■■■□□ 2.35
CPNE1-216ENST00000437340 SLC39A14Q15043 492 aa29.74■■■□□ 2.35
CPNE1-216ENST00000437340 MFSD14BQ5SR56 506 aa29.74■■■□□ 2.35
CPNE1-216ENST00000437340 EVX2Q03828 476 aa29.73■■■□□ 2.35
CPNE1-216ENST00000437340 SUGT1Q9Y2Z0 365 aa29.73■■■□□ 2.35
CPNE1-216ENST00000437340 TSPY2A6NKD2 308 aa29.72■■■□□ 2.35
CPNE1-216ENST00000437340 BTDP43251 543 aa29.72■■■□□ 2.35
CPNE1-216ENST00000437340 AKAP17AQ02040 695 aaKnown RBP29.72■■■□□ 2.35
CPNE1-216ENST00000437340 CCDC178Q5BJE1 867 aa29.72■■■□□ 2.35
CPNE1-216ENST00000437340 CKAP2LQ8IYA6 745 aa29.72■■■□□ 2.35
CPNE1-216ENST00000437340 FOXP1Q9H334 677 aaPredicted RBP29.72■■■□□ 2.35
CPNE1-216ENST00000437340 KINO60870 393 aaKnown RBP29.72■■■□□ 2.35
CPNE1-216ENST00000437340 JMYQ8N9B5 988 aa29.72■■■□□ 2.35
CPNE1-216ENST00000437340 FAM200AQ8TCP9 573 aa29.72■■■□□ 2.35
CPNE1-216ENST00000437340 MRVI1Q9Y6F6 885 aa29.72■■■□□ 2.35
CPNE1-216ENST00000437340 GAKO14976 1311 aa29.71■■■□□ 2.35
CPNE1-216ENST00000437340 UBE2Q2LH0YL09 131 aa29.71■■■□□ 2.35
CPNE1-216ENST00000437340 PRPF3O43395 683 aaKnown RBP29.71■■■□□ 2.35
CPNE1-216ENST00000437340 CAVIN2O95810 425 aa29.71■■■□□ 2.35
CPNE1-216ENST00000437340 FUT2Q10981 343 aa29.71■■■□□ 2.35
CPNE1-216ENST00000437340 FAM47AQ5JRC9 791 aa29.71■■■□□ 2.35
CPNE1-216ENST00000437340 SASS6Q6UVJ0 657 aa29.71■■■□□ 2.35
CPNE1-216ENST00000437340 NOSTRINQ8IVI9 506 aa29.71■■■□□ 2.35
CPNE1-216ENST00000437340 TGFBRAP1Q8WUH2 860 aa29.71■■■□□ 2.35
CPNE1-216ENST00000437340 PPP6R2O75170 966 aa29.7■■■□□ 2.35
CPNE1-216ENST00000437340 XBP1P17861 261 aa29.7■■■□□ 2.35
CPNE1-216ENST00000437340 POLD1P28340 1107 aa29.7■■■□□ 2.35
CPNE1-216ENST00000437340 MPNDQ8N594 471 aa29.7■■■□□ 2.35
CPNE1-216ENST00000437340 CNKSR1Q969H4 720 aa29.7■■■□□ 2.35
CPNE1-216ENST00000437340 ESPNB1AK53 854 aa29.69■■■□□ 2.34
CPNE1-216ENST00000437340 DGKHQ86XP1 1220 aa29.69■■■□□ 2.34
CPNE1-216ENST00000437340 FMR1NBQ8N0W7 255 aaPredicted RBP29.69■■■□□ 2.34
CPNE1-216ENST00000437340 CMTR1Q8N1G2 835 aaKnown RBP29.69■■■□□ 2.34
CPNE1-216ENST00000437340 ANKS1AQ92625 1134 aa29.69■■■□□ 2.34
CPNE1-216ENST00000437340 TMTC3Q6ZXV5 915 aa29.69■■■□□ 2.34
CPNE1-216ENST00000437340 DIS3L2Q8IYB7 885 aaKnown RBP29.69■■■□□ 2.34
CPNE1-216ENST00000437340 CCDC82Q8N4S0 544 aa29.69■■■□□ 2.34
CPNE1-216ENST00000437340 CTCFLQ8NI51 663 aaPredicted RBP29.69■■■□□ 2.34
CPNE1-216ENST00000437340 ZC3H12CQ9C0D7 883 aaKnown RBP29.69■■■□□ 2.34
CPNE1-216ENST00000437340 TMX4Q9H1E5 349 aaPredicted RBP29.69■■■□□ 2.34
CPNE1-216ENST00000437340 ZNF287Q9HBT7 754 aa29.69■■■□□ 2.34
CPNE1-216ENST00000437340 NAV1Q8NEY1 1877 aa29.68■■■□□ 2.34
CPNE1-216ENST00000437340 AXDND1Q5T1B0 1012 aaPredicted RBP29.68■■■□□ 2.34
CPNE1-216ENST00000437340 MAP3K14Q99558 947 aa29.68■■■□□ 2.34
CPNE1-216ENST00000437340 RTN4Q9NQC3 1192 aaKnown RBP29.68■■■□□ 2.34
CPNE1-216ENST00000437340 TCP11L1Q9NUJ3 509 aa29.68■■■□□ 2.34
CPNE1-216ENST00000437340 CMA1P23946 247 aa29.67■■■□□ 2.34
CPNE1-216ENST00000437340 PTPAQ15257 358 aa29.67■■■□□ 2.34
CPNE1-216ENST00000437340 ILDR2Q71H61 639 aa29.67■■■□□ 2.34
CPNE1-216ENST00000437340 RRAGDQ9NQL2 400 aaPredicted RBP29.67■■■□□ 2.34
CPNE1-216ENST00000437340 EIF4ENIF1Q9NRA8 985 aaKnown RBP29.67■■■□□ 2.34
CPNE1-216ENST00000437340 NMT2O60551 498 aa29.67■■■□□ 2.34
CPNE1-216ENST00000437340 TFAP4Q01664 338 aa29.67■■■□□ 2.34
CPNE1-216ENST00000437340 RCSD1Q6JBY9 416 aa29.67■■■□□ 2.34
CPNE1-216ENST00000437340 DPP8Q6V1X1 898 aaPredicted RBP29.67■■■□□ 2.34
CPNE1-216ENST00000437340 TEX11Q8IYF3 940 aa29.67■■■□□ 2.34
CPNE1-216ENST00000437340 MKNK2Q9HBH9 465 aa29.67■■■□□ 2.34
CPNE1-216ENST00000437340 BTBD18B2RXH4 712 aa29.66■■■□□ 2.34
CPNE1-216ENST00000437340 GTF2IP78347 998 aa29.66■■■□□ 2.34
CPNE1-216ENST00000437340 PKN1Q16512 942 aa29.66■■■□□ 2.34
CPNE1-216ENST00000437340 SGIP1Q9BQI5 828 aa29.66■■■□□ 2.34
CPNE1-216ENST00000437340 KCNJ14Q9UNX9 436 aa29.66■■■□□ 2.34
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms