RNA–Protein interactions for RNA: ENST00000437201.5

SBDSP1-203, Transcript of SBDS, ribosome maturation factor pseudogene 1, humanhuman

TSL 1 (best)

Gene SBDSP1, Length 839 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SBDSP1-203ENST00000437201 FAM110CQ1W6H9 321 aa21.23■□□□□ 0.99
SBDSP1-203ENST00000437201 TATDN1Q6P1N9 297 aa21.23■□□□□ 0.99
SBDSP1-203ENST00000437201 SH3TC2Q8TF17 1288 aa21.23■□□□□ 0.99
SBDSP1-203ENST00000437201 HAUS7Q99871 368 aa21.23■□□□□ 0.99
SBDSP1-203ENST00000437201 BOLA2Q9H3K6 86 aa21.23■□□□□ 0.99
SBDSP1-203ENST00000437201 PTPRFP10586 1907 aa21.22■□□□□ 0.99
SBDSP1-203ENST00000437201 TNPO2O14787 897 aaKnown RBP21.22■□□□□ 0.99
SBDSP1-203ENST00000437201 GDF11O95390 407 aa21.22■□□□□ 0.99
SBDSP1-203ENST00000437201 POLR3DP05423 398 aaPredicted RBP21.22■□□□□ 0.99
SBDSP1-203ENST00000437201 ANKRD13CQ8N6S4 541 aa21.22■□□□□ 0.99
SBDSP1-203ENST00000437201 COA7Q96BR5 231 aa21.22■□□□□ 0.99
SBDSP1-203ENST00000437201 TAOK2Q9UL54 1235 aa21.22■□□□□ 0.99
SBDSP1-203ENST00000437201 IRX3P78415 501 aaPredicted RBP21.21■□□□□ 0.99
SBDSP1-203ENST00000437201 CERKLQ49MI3 558 aaPredicted RBP21.21■□□□□ 0.99
SBDSP1-203ENST00000437201 ZSCAN25Q6NSZ9 544 aa21.21■□□□□ 0.99
SBDSP1-203ENST00000437201 SLAIN1Q8ND83 568 aa21.21■□□□□ 0.99
SBDSP1-203ENST00000437201 GPATCH3Q96I76 525 aa21.21■□□□□ 0.99
SBDSP1-203ENST00000437201 ASCC2Q9H1I8 757 aaPredicted RBP21.21■□□□□ 0.99
SBDSP1-203ENST00000437201 CABP5Q9NP86 173 aa21.21■□□□□ 0.99
SBDSP1-203ENST00000437201 BIN2Q9UBW5 565 aaPredicted RBP21.21■□□□□ 0.99
SBDSP1-203ENST00000437201 CDK5RAP2Q96SN8 1893 aa21.21■□□□□ 0.99
SBDSP1-203ENST00000437201 ATAD5Q96QE3 1844 aa21.2■□□□□ 0.98
SBDSP1-203ENST00000437201 TCRBV5S4A2TA0A5A2 114 aa21.2■□□□□ 0.98
SBDSP1-203ENST00000437201 GH2P01242 217 aa21.2■□□□□ 0.98
SBDSP1-203ENST00000437201 EN2P19622 333 aaPredicted RBP21.2■□□□□ 0.98
SBDSP1-203ENST00000437201 HOXA7P31268 230 aaPredicted RBP21.2■□□□□ 0.98
SBDSP1-203ENST00000437201 UBXN2AP68543 259 aa21.2■□□□□ 0.98
SBDSP1-203ENST00000437201 PRKCZQ05513 592 aa21.2■□□□□ 0.98
SBDSP1-203ENST00000437201 PRPF38BQ5VTL8 546 aaKnown RBP21.2■□□□□ 0.98
SBDSP1-203ENST00000437201 DCTPP1Q9H773 170 aa21.2■□□□□ 0.98
SBDSP1-203ENST00000437201 MCM9Q9NXL9 1143 aa21.2■□□□□ 0.98
SBDSP1-203ENST00000437201 SIPA1L1O43166 1804 aa21.2■□□□□ 0.98
SBDSP1-203ENST00000437201 CENPFP49454 3210 aa21.19■□□□□ 0.98
SBDSP1-203ENST00000437201 RBBP6Q7Z6E9 1792 aaKnown RBP21.19■□□□□ 0.98
SBDSP1-203ENST00000437201 JAG1P78504 1218 aa21.19■□□□□ 0.98
SBDSP1-203ENST00000437201 USP17L2Q6R6M4 530 aa21.19■□□□□ 0.98
SBDSP1-203ENST00000437201 NKX2-3Q8TAU0 364 aa21.19■□□□□ 0.98
SBDSP1-203ENST00000437201 LOC285556D6RIA3 1793 aa21.18■□□□□ 0.98
SBDSP1-203ENST00000437201 MYCP01106 439 aaPredicted RBP21.18■□□□□ 0.98
SBDSP1-203ENST00000437201 ADD2P35612 726 aa21.18■□□□□ 0.98
SBDSP1-203ENST00000437201 IRF5Q13568 498 aa21.18■□□□□ 0.98
SBDSP1-203ENST00000437201 ABCB5Q2M3G0 1257 aa21.18■□□□□ 0.98
SBDSP1-203ENST00000437201 GTF3C2Q8WUA4 911 aaPredicted RBP21.18■□□□□ 0.98
SBDSP1-203ENST00000437201 EDC3Q96F86 508 aaKnown RBP21.18■□□□□ 0.98
SBDSP1-203ENST00000437201 DDRGK1Q96HY6 314 aa21.18■□□□□ 0.98
SBDSP1-203ENST00000437201 FEZ1Q99689 392 aa21.18■□□□□ 0.98
SBDSP1-203ENST00000437201 ATP8A2Q9NTI2 1148 aa21.18■□□□□ 0.98
SBDSP1-203ENST00000437201 ECHDC1Q9NTX5 307 aa21.18■□□□□ 0.98
SBDSP1-203ENST00000437201 ZSWIM8A7E2V4 1837 aa21.18■□□□□ 0.98
SBDSP1-203ENST00000437201 MYH1P12882 1939 aa21.17■□□□□ 0.98
SBDSP1-203ENST00000437201 FLT3LGP49771 235 aa21.17■□□□□ 0.98
SBDSP1-203ENST00000437201 PLCD1P51178 756 aa21.17■□□□□ 0.98
SBDSP1-203ENST00000437201 USP14P54578 494 aa21.17■□□□□ 0.98
SBDSP1-203ENST00000437201 RAB3GAP1Q15042 981 aa21.17■□□□□ 0.98
SBDSP1-203ENST00000437201 UBE3CQ15386 1083 aa21.17■□□□□ 0.98
SBDSP1-203ENST00000437201 AMOTL1Q8IY63 956 aa21.17■□□□□ 0.98
SBDSP1-203ENST00000437201 PXYLP1Q8TE99 480 aa21.17■□□□□ 0.98
SBDSP1-203ENST00000437201 DCP1AQ9NPI6 582 aaPredicted RBP21.17■□□□□ 0.98
SBDSP1-203ENST00000437201 PDE4DIPQ5VU43 2346 aa21.16■□□□□ 0.98
SBDSP1-203ENST00000437201 SMARCA5O60264 1052 aaPredicted RBP21.16■□□□□ 0.98
SBDSP1-203ENST00000437201 ADCY3O60266 1144 aa21.16■□□□□ 0.98
SBDSP1-203ENST00000437201 LCORLQ8N3X6 602 aa21.16■□□□□ 0.98
SBDSP1-203ENST00000437201 MORF4L1Q9UBU8 362 aa21.16■□□□□ 0.98
SBDSP1-203ENST00000437201 GABRQQ9UN88 632 aa21.16■□□□□ 0.98
SBDSP1-203ENST00000437201 SHMT1P34896 483 aa21.15■□□□□ 0.98
SBDSP1-203ENST00000437201 GABPAQ06546 454 aa21.15■□□□□ 0.98
SBDSP1-203ENST00000437201 SHROOM1Q2M3G4 852 aaPredicted RBP21.15■□□□□ 0.98
SBDSP1-203ENST00000437201 SDR42E1Q8WUS8 393 aa21.15■□□□□ 0.98
SBDSP1-203ENST00000437201 ARMT1Q9H993 441 aa21.15■□□□□ 0.98
SBDSP1-203ENST00000437201 SWAP70Q9UH65 585 aa21.15■□□□□ 0.98
SBDSP1-203ENST00000437201 KIAA0100Q14667 2235 aaKnown RBP21.14■□□□□ 0.98
SBDSP1-203ENST00000437201 MBD4O95243 580 aa21.14■□□□□ 0.97
SBDSP1-203ENST00000437201 CAPN2P17655 700 aa21.14■□□□□ 0.97
SBDSP1-203ENST00000437201 HERVK_113P62684 666 aa21.14■□□□□ 0.97
SBDSP1-203ENST00000437201 GPRC5AQ8NFJ5 357 aa21.14■□□□□ 0.97
SBDSP1-203ENST00000437201 C12orf42Q96LP6 360 aa21.14■□□□□ 0.97
SBDSP1-203ENST00000437201 P2RX7Q99572 595 aaKnown RBP21.14■□□□□ 0.97
SBDSP1-203ENST00000437201 KIAA1683Q9H0B3 1180 aa21.14■□□□□ 0.97
SBDSP1-203ENST00000437201 RNF208Q9H0X6 261 aa21.14■□□□□ 0.97
SBDSP1-203ENST00000437201 EMILIN3Q9NT22 766 aa21.14■□□□□ 0.97
SBDSP1-203ENST00000437201 GJB1P08034 283 aa21.13■□□□□ 0.97
SBDSP1-203ENST00000437201 CCL5P13501 91 aa21.13■□□□□ 0.97
SBDSP1-203ENST00000437201 MTFR1Q15390 333 aa21.13■□□□□ 0.97
SBDSP1-203ENST00000437201 CCAR1Q8IX12 1150 aaKnown RBP21.13■□□□□ 0.97
SBDSP1-203ENST00000437201 MGAMO43451 1857 aa21.13■□□□□ 0.97
SBDSP1-203ENST00000437201 USP17L15C9J2P7 530 aa21.12■□□□□ 0.97
SBDSP1-203ENST00000437201 USP17L13C9JLJ4 530 aa21.12■□□□□ 0.97
SBDSP1-203ENST00000437201 USP17L11C9JVI0 530 aa21.12■□□□□ 0.97
SBDSP1-203ENST00000437201 USP17L18D6R9N7 530 aa21.12■□□□□ 0.97
SBDSP1-203ENST00000437201 USP17L22D6RA61 530 aa21.12■□□□□ 0.97
SBDSP1-203ENST00000437201 USP17L17D6RBQ6 530 aa21.12■□□□□ 0.97
SBDSP1-203ENST00000437201 USP17L19D6RCP7 530 aa21.12■□□□□ 0.97
SBDSP1-203ENST00000437201 USP17L20D6RJB6 530 aa21.12■□□□□ 0.97
SBDSP1-203ENST00000437201 MPHOSPH10O00566 681 aaKnown RBP21.12■□□□□ 0.97
SBDSP1-203ENST00000437201 RRP1P56182 461 aaKnown RBP21.12■□□□□ 0.97
SBDSP1-203ENST00000437201 USP17L24Q0WX57 530 aa21.12■□□□□ 0.97
SBDSP1-203ENST00000437201 LRRFIP1Q32MZ4 808 aaKnown RBP21.12■□□□□ 0.97
SBDSP1-203ENST00000437201 GJA8P48165 433 aa21.11■□□□□ 0.97
SBDSP1-203ENST00000437201 ZFYP08048 801 aaPredicted RBP21.1■□□□□ 0.97
SBDSP1-203ENST00000437201 MAPK4P31152 587 aa21.1■□□□□ 0.97
Retrieved 100 of 20,778 RNA–protein pairs in 52.7 ms