RNA–Protein interactions for RNA: ENST00000436978.5

PTPN13-204, Transcript of protein tyrosine phosphatase, non-receptor type 13, humanhuman

APPRIS P4 TSL 5 BASIC

Gene PTPN13, Length 8,573 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN13-204ENST00000436978 RNF216Q9NWF9 866 aaPredicted RBP17.68■□□□□ 0.42
PTPN13-204ENST00000436978 MLKLQ8NB16 471 aa17.68■□□□□ 0.42
PTPN13-204ENST00000436978 MRPL44Q9H9J2 332 aaKnown RBP17.68■□□□□ 0.42
PTPN13-204ENST00000436978 IMPACTQ9P2X3 320 aa17.68■□□□□ 0.42
PTPN13-204ENST00000436978 SPOPO43791 374 aa17.68■□□□□ 0.42
PTPN13-204ENST00000436978 APBA3O96018 575 aa17.68■□□□□ 0.42
PTPN13-204ENST00000436978 IWS1Q96ST2 819 aa17.68■□□□□ 0.42
PTPN13-204ENST00000436978 SNX14Q9Y5W7 946 aa17.68■□□□□ 0.42
PTPN13-204ENST00000436978 LAMC1P11047 1609 aa17.68■□□□□ 0.42
PTPN13-204ENST00000436978 IGSF22Q8N9C0 903 aa17.67■□□□□ 0.42
PTPN13-204ENST00000436978 RNF34Q969K3 372 aa17.67■□□□□ 0.42
PTPN13-204ENST00000436978 LGR6Q9HBX8 967 aa17.67■□□□□ 0.42
PTPN13-204ENST00000436978 TBC1D8BQ0IIM8 1120 aa17.67■□□□□ 0.42
PTPN13-204ENST00000436978 TGFBRAP1Q8WUH2 860 aa17.67■□□□□ 0.42
PTPN13-204ENST00000436978 CSADQ9Y600 493 aa17.67■□□□□ 0.42
PTPN13-204ENST00000436978 PPIP5K2O43314 1243 aa17.67■□□□□ 0.42
PTPN13-204ENST00000436978 USH1GQ495M9 461 aa17.67■□□□□ 0.42
PTPN13-204ENST00000436978 NUCKS1Q9H1E3 243 aaKnown RBP17.67■□□□□ 0.42
PTPN13-204ENST00000436978 ERBB4Q15303 1308 aa17.67■□□□□ 0.42
PTPN13-204ENST00000436978 XPO5Q9HAV4 1204 aaKnown RBP eCLIP17.67■□□□□ 0.42
PTPN13-204ENST00000436978 ACTN4O43707 911 aaKnown RBP17.67■□□□□ 0.42
PTPN13-204ENST00000436978 SYCE1Q8N0S2 351 aa17.67■□□□□ 0.42
PTPN13-204ENST00000436978 CSGALNACT2Q8N6G5 542 aa17.67■□□□□ 0.42
PTPN13-204ENST00000436978 IQGAP3Q86VI3 1631 aa17.67■□□□□ 0.42
PTPN13-204ENST00000436978 PLEKHG1Q9ULL1 1385 aa17.67■□□□□ 0.42
PTPN13-204ENST00000436978 HARSP12081 509 aaKnown RBP17.67■□□□□ 0.42
PTPN13-204ENST00000436978 DCAF15Q66K64 600 aa17.67■□□□□ 0.42
PTPN13-204ENST00000436978 ATP5JP18859 108 aa17.67■□□□□ 0.42
PTPN13-204ENST00000436978 CHURC1Q8WUH1 139 aa17.67■□□□□ 0.42
PTPN13-204ENST00000436978 SPC25Q9HBM1 224 aa17.67■□□□□ 0.42
PTPN13-204ENST00000436978 PCP11498 1178 aaKnown RBP17.66■□□□□ 0.42
PTPN13-204ENST00000436978 CTDSPL2Q05D32 466 aa17.66■□□□□ 0.42
PTPN13-204ENST00000436978 ARFGAP2Q8N6H7 521 aa17.66■□□□□ 0.42
PTPN13-204ENST00000436978 GCNT3O95395 438 aa17.66■□□□□ 0.42
PTPN13-204ENST00000436978 A1BGP04217 495 aa17.66■□□□□ 0.42
PTPN13-204ENST00000436978 TXKP42681 527 aa17.66■□□□□ 0.42
PTPN13-204ENST00000436978 NLRX1Q86UT6 975 aa17.66■□□□□ 0.42
PTPN13-204ENST00000436978 ZBTB38Q8NAP3 1195 aaPredicted RBP17.66■□□□□ 0.42
PTPN13-204ENST00000436978 ZNF830Q96NB3 372 aaPredicted RBP17.66■□□□□ 0.42
PTPN13-204ENST00000436978 PLEKHG3A1L390 1219 aa17.66■□□□□ 0.42
PTPN13-204ENST00000436978 EIF4A1P60842 406 aaKnown RBP17.66■□□□□ 0.42
PTPN13-204ENST00000436978 ARID4AP29374 1257 aaPredicted RBP17.66■□□□□ 0.42
PTPN13-204ENST00000436978 SWAP70Q9UH65 585 aa17.66■□□□□ 0.42
PTPN13-204ENST00000436978 DAPK3O43293 454 aa17.66■□□□□ 0.42
PTPN13-204ENST00000436978 SNX29Q8TEQ0 813 aa17.66■□□□□ 0.42
PTPN13-204ENST00000436978 LEO1Q8WVC0 666 aaPredicted RBP17.66■□□□□ 0.42
PTPN13-204ENST00000436978 ATP2B4P23634 1241 aa17.66■□□□□ 0.42
PTPN13-204ENST00000436978 KRT9P35527 623 aa17.66■□□□□ 0.42
PTPN13-204ENST00000436978 SLFN12Q8IYM2 578 aa17.66■□□□□ 0.42
PTPN13-204ENST00000436978 MYCT1Q8N699 235 aa17.66■□□□□ 0.42
PTPN13-204ENST00000436978 FAM204AQ9H8W3 233 aa17.66■□□□□ 0.42
PTPN13-204ENST00000436978 PABPC4Q13310 644 aaKnown RBP eCLIP17.66■□□□□ 0.42
PTPN13-204ENST00000436978 CCDC6Q16204 474 aa17.66■□□□□ 0.42
PTPN13-204ENST00000436978 HDXQ7Z353 690 aa17.66■□□□□ 0.42
PTPN13-204ENST00000436978 IFT81Q8WYA0 676 aa17.66■□□□□ 0.42
PTPN13-204ENST00000436978 SLC9C1Q4G0N8 1177 aa17.65■□□□□ 0.42
PTPN13-204ENST00000436978 CCDC94Q9BW85 323 aaPredicted RBP17.65■□□□□ 0.42
PTPN13-204ENST00000436978 POSTNQ15063 836 aa17.65■□□□□ 0.42
PTPN13-204ENST00000436978 CCDC25Q86WR0 208 aa17.65■□□□□ 0.42
PTPN13-204ENST00000436978 MED23Q9ULK4 1368 aa17.65■□□□□ 0.42
PTPN13-204ENST00000436978 GNPTABQ3T906 1256 aa17.65■□□□□ 0.42
PTPN13-204ENST00000436978 CCDC125Q86Z20 511 aa17.65■□□□□ 0.42
PTPN13-204ENST00000436978 PPARAQ07869 468 aa17.65■□□□□ 0.42
PTPN13-204ENST00000436978 FAM227BQ96M60 508 aa17.65■□□□□ 0.42
PTPN13-204ENST00000436978 ERCC6LQ2NKX8 1250 aa17.65■□□□□ 0.42
PTPN13-204ENST00000436978 MFSD14BQ5SR56 506 aa17.65■□□□□ 0.42
PTPN13-204ENST00000436978 PPP1R9BQ96SB3 815 aa17.65■□□□□ 0.42
PTPN13-204ENST00000436978 CARD10Q9BWT7 1032 aa17.65■□□□□ 0.42
PTPN13-204ENST00000436978 ZNF408Q9H9D4 720 aa17.65■□□□□ 0.42
PTPN13-204ENST00000436978 ANKARQ7Z5J8 1434 aa17.65■□□□□ 0.42
PTPN13-204ENST00000436978 GALNT17Q6IS24 598 aa17.65■□□□□ 0.42
PTPN13-204ENST00000436978 WWC3Q9ULE0 1092 aa17.65■□□□□ 0.42
PTPN13-204ENST00000436978 TICAM2Q86XR7 235 aa17.64■□□□□ 0.42
PTPN13-204ENST00000436978 CFAP57Q96MR6 1250 aa17.64■□□□□ 0.42
PTPN13-204ENST00000436978 TCP10Q12799 353 aa17.64■□□□□ 0.41
PTPN13-204ENST00000436978 KARSQ15046 597 aaKnown RBP17.64■□□□□ 0.41
PTPN13-204ENST00000436978 CLSTN2Q9H4D0 955 aa17.64■□□□□ 0.41
PTPN13-204ENST00000436978 GMNNO75496 209 aa17.64■□□□□ 0.41
PTPN13-204ENST00000436978 AFAP1L2Q8N4X5 818 aa17.64■□□□□ 0.41
PTPN13-204ENST00000436978 UBLCP1Q8WVY7 318 aaPredicted RBP17.64■□□□□ 0.41
PTPN13-204ENST00000436978 TBC1D31Q96DN5 1066 aa17.64■□□□□ 0.41
PTPN13-204ENST00000436978 LRWD1Q9UFC0 647 aa17.64■□□□□ 0.41
PTPN13-204ENST00000436978 TSKSQ9UJT2 592 aa17.64■□□□□ 0.41
PTPN13-204ENST00000436978 PER1O15534 1290 aaPredicted RBP17.64■□□□□ 0.41
PTPN13-204ENST00000436978 NLRP12P59046 1061 aa17.64■□□□□ 0.41
PTPN13-204ENST00000436978 SMC1BQ8NDV3 1235 aa17.64■□□□□ 0.41
PTPN13-204ENST00000436978 PLCD3Q8N3E9 789 aa17.64■□□□□ 0.41
PTPN13-204ENST00000436978 NAPGQ99747 312 aaPredicted RBP17.64■□□□□ 0.41
PTPN13-204ENST00000436978 SAMD15Q9P1V8 674 aa17.64■□□□□ 0.41
PTPN13-204ENST00000436978 CRCPO75575 148 aa17.64■□□□□ 0.41
PTPN13-204ENST00000436978 CCDC121Q6ZUS5 278 aa17.64■□□□□ 0.41
PTPN13-204ENST00000436978 SMCR8Q8TEV9 937 aaPredicted RBP17.64■□□□□ 0.41
PTPN13-204ENST00000436978 CCT6BQ92526 530 aa17.64■□□□□ 0.41
PTPN13-204ENST00000436978 ZNF202O95125 648 aa17.63■□□□□ 0.41
PTPN13-204ENST00000436978 PSMC4P43686 418 aa17.63■□□□□ 0.41
PTPN13-204ENST00000436978 RPS8P62241 208 aaKnown RBP17.63■□□□□ 0.41
PTPN13-204ENST00000436978 ZYXQ15942 572 aaKnown RBP17.63■□□□□ 0.41
PTPN13-204ENST00000436978 ARHGEF16Q5VV41 709 aa17.63■□□□□ 0.41
PTPN13-204ENST00000436978 NSMCE1Q8WV22 266 aa17.63■□□□□ 0.41
PTPN13-204ENST00000436978 KDM2BQ8NHM5 1336 aa17.63■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 40.9 ms