RNA–Protein interactions for RNA: ENST00000436412.1

NIF3L1-208, Transcript of NGG1 interacting factor 3 like 1, humanhuman

TSL 3

Gene NIF3L1, Length 479 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIF3L1-208ENST00000436412 TTLL5Q6EMB2 1281 aa10.81□□□□□ -0.68
NIF3L1-208ENST00000436412 MYD88Q99836 296 aa10.81□□□□□ -0.68
NIF3L1-208ENST00000436412 STK17AQ9UEE5 414 aa10.81□□□□□ -0.68
NIF3L1-208ENST00000436412 LEMD3Q9Y2U8 911 aa10.81□□□□□ -0.68
NIF3L1-208ENST00000436412 PPP2R3BQ9Y5P8 575 aa10.81□□□□□ -0.68
NIF3L1-208ENST00000436412 TTLL8A6PVC2 850 aa10.8□□□□□ -0.68
NIF3L1-208ENST00000436412 ERVH48-1M5A8F1 160 aa10.8□□□□□ -0.68
NIF3L1-208ENST00000436412 PPFIA3O75145 1194 aa10.8□□□□□ -0.68
NIF3L1-208ENST00000436412 SASH1O94885 1247 aa10.8□□□□□ -0.68
NIF3L1-208ENST00000436412 DDX58O95786 925 aaKnown RBP10.8□□□□□ -0.68
NIF3L1-208ENST00000436412 FBXO45P0C2W1 286 aa10.8□□□□□ -0.68
NIF3L1-208ENST00000436412 CTSWP56202 376 aa10.8□□□□□ -0.68
NIF3L1-208ENST00000436412 ARHGEF6Q15052 776 aa10.8□□□□□ -0.68
NIF3L1-208ENST00000436412 SUPT20HL1Q3ZLR7 823 aa10.8□□□□□ -0.68
NIF3L1-208ENST00000436412 KDF1Q8NAX2 398 aaPredicted RBP10.8□□□□□ -0.68
NIF3L1-208ENST00000436412 RUNDC1Q96C34 613 aa10.8□□□□□ -0.68
NIF3L1-208ENST00000436412 WNK4Q96J92 1243 aa10.8□□□□□ -0.68
NIF3L1-208ENST00000436412 CCDC85AQ96PX6 553 aaPredicted RBP10.8□□□□□ -0.68
NIF3L1-208ENST00000436412 METTL22Q9BUU2 404 aaPredicted RBP10.8□□□□□ -0.68
NIF3L1-208ENST00000436412 MXD3Q9BW11 206 aa10.8□□□□□ -0.68
NIF3L1-208ENST00000436412 DEFB129Q9H1M3 183 aa10.8□□□□□ -0.68
NIF3L1-208ENST00000436412 EFCC1Q9HA90 598 aa10.8□□□□□ -0.68
NIF3L1-208ENST00000436412 ZBBXA8MT70 800 aa10.79□□□□□ -0.68
NIF3L1-208ENST00000436412 IGF2BP3O00425 579 aaKnown RBP eCLIP10.79□□□□□ -0.68
NIF3L1-208ENST00000436412 ADD1P35611 737 aaKnown RBP10.79□□□□□ -0.68
NIF3L1-208ENST00000436412 DLGAP5Q15398 846 aa10.79□□□□□ -0.68
NIF3L1-208ENST00000436412 NBPF11Q86T75 865 aa10.79□□□□□ -0.68
NIF3L1-208ENST00000436412 MTMR14Q8NCE2 650 aa10.79□□□□□ -0.68
NIF3L1-208ENST00000436412 BANK1Q8NDB2 785 aa10.79□□□□□ -0.68
NIF3L1-208ENST00000436412 TTLL11Q8NHH1 800 aa10.79□□□□□ -0.68
NIF3L1-208ENST00000436412 ANKRD2Q9GZV1 360 aa10.79□□□□□ -0.68
NIF3L1-208ENST00000436412 PHAXQ9H814 394 aaKnown RBP10.79□□□□□ -0.68
NIF3L1-208ENST00000436412 WTIPA6NIX2 430 aaPredicted RBP10.78□□□□□ -0.68
NIF3L1-208ENST00000436412 EN2P19622 333 aaPredicted RBP10.78□□□□□ -0.68
NIF3L1-208ENST00000436412 IREB2P48200 963 aaKnown RBP10.78□□□□□ -0.68
NIF3L1-208ENST00000436412 RAB15P59190 212 aa10.78□□□□□ -0.68
NIF3L1-208ENST00000436412 SP3Q02447 781 aa10.78□□□□□ -0.68
NIF3L1-208ENST00000436412 CRHR2Q13324 411 aa10.78□□□□□ -0.68
NIF3L1-208ENST00000436412 KIAA0825Q8IV33 1275 aa10.78□□□□□ -0.68
NIF3L1-208ENST00000436412 MBIPQ9NS73 344 aa10.78□□□□□ -0.68
NIF3L1-208ENST00000436412 MYH3P11055 1940 aa10.78□□□□□ -0.68
NIF3L1-208ENST00000436412 LAMB1P07942 1786 aa10.77□□□□□ -0.68
NIF3L1-208ENST00000436412 ZNF646O15015 1829 aaPredicted RBP10.77□□□□□ -0.68
NIF3L1-208ENST00000436412 FIGNL2A6NMB9 653 aa10.77□□□□□ -0.69
NIF3L1-208ENST00000436412 MYO1BO43795 1136 aa10.77□□□□□ -0.69
NIF3L1-208ENST00000436412 ZNF853P0CG23 659 aa10.77□□□□□ -0.69
NIF3L1-208ENST00000436412 IGHMBP2P38935 993 aaKnown RBP10.77□□□□□ -0.69
NIF3L1-208ENST00000436412 CTSOP43234 321 aaPredicted RBP10.77□□□□□ -0.69
NIF3L1-208ENST00000436412 CALD1Q05682 793 aaKnown RBP10.77□□□□□ -0.69
NIF3L1-208ENST00000436412 ZNF800Q2TB10 664 aaPredicted RBP eCLIP10.77□□□□□ -0.69
NIF3L1-208ENST00000436412 TXNRD3Q86VQ6 643 aa10.77□□□□□ -0.69
NIF3L1-208ENST00000436412 CCDC146Q8IYE0 955 aa10.77□□□□□ -0.69
NIF3L1-208ENST00000436412 CD99L2Q8TCZ2 262 aa10.77□□□□□ -0.69
NIF3L1-208ENST00000436412 JARID2Q92833 1246 aaPredicted RBP10.77□□□□□ -0.69
NIF3L1-208ENST00000436412 ZNF333Q96JL9 665 aa10.77□□□□□ -0.69
NIF3L1-208ENST00000436412 CLMNQ96JQ2 1002 aa10.77□□□□□ -0.69
NIF3L1-208ENST00000436412 GREM2Q9H772 168 aa10.77□□□□□ -0.69
NIF3L1-208ENST00000436412 ZNF804BA4D1E1 1349 aa10.77□□□□□ -0.69
NIF3L1-208ENST00000436412 LAMA3Q16787 3333 aa10.77□□□□□ -0.69
NIF3L1-208ENST00000436412 GNAI1P63096 354 aa10.76□□□□□ -0.69
NIF3L1-208ENST00000436412 GTF2IP78347 998 aa10.76□□□□□ -0.69
NIF3L1-208ENST00000436412 RELBQ01201 579 aa10.76□□□□□ -0.69
NIF3L1-208ENST00000436412 NEXNQ0ZGT2 675 aa10.76□□□□□ -0.69
NIF3L1-208ENST00000436412 KSR2Q6VAB6 950 aa10.76□□□□□ -0.69
NIF3L1-208ENST00000436412 ANKRD13AQ8IZ07 590 aa10.76□□□□□ -0.69
NIF3L1-208ENST00000436412 SNRKQ9NRH2 765 aa10.76□□□□□ -0.69
NIF3L1-208ENST00000436412 IFT57Q9NWB7 429 aa10.76□□□□□ -0.69
NIF3L1-208ENST00000436412 MAP3K2Q9Y2U5 619 aa10.76□□□□□ -0.69
NIF3L1-208ENST00000436412 PTSQ03393 145 aa10.75□□□□□ -0.69
NIF3L1-208ENST00000436412 WDR43Q15061 677 aaKnown RBP eCLIP10.75□□□□□ -0.69
NIF3L1-208ENST00000436412 SLC9C1Q4G0N8 1177 aa10.75□□□□□ -0.69
NIF3L1-208ENST00000436412 CCDC30Q5VVM6 783 aa10.75□□□□□ -0.69
NIF3L1-208ENST00000436412 INSM2Q96T92 566 aaPredicted RBP10.75□□□□□ -0.69
NIF3L1-208ENST00000436412 MPHOSPH8Q99549 860 aa10.75□□□□□ -0.69
NIF3L1-208ENST00000436412 CD209Q9NNX6 404 aa10.75□□□□□ -0.69
NIF3L1-208ENST00000436412 FZD1Q9UP38 647 aa10.75□□□□□ -0.69
NIF3L1-208ENST00000436412 COL6A3P12111 3177 aa10.75□□□□□ -0.69
NIF3L1-208ENST00000436412 USP2O75604 605 aaPredicted RBP10.74□□□□□ -0.69
NIF3L1-208ENST00000436412 WDHD1O75717 1129 aaPredicted RBP10.74□□□□□ -0.69
NIF3L1-208ENST00000436412 IGKV5-2P06315 115 aa10.74□□□□□ -0.69
NIF3L1-208ENST00000436412 ADH1AP07327 375 aa10.74□□□□□ -0.69
NIF3L1-208ENST00000436412 KCNJ4P48050 445 aa10.74□□□□□ -0.69
NIF3L1-208ENST00000436412 FKBP1AP62942 108 aaKnown RBP10.74□□□□□ -0.69
NIF3L1-208ENST00000436412 TNFAIP1Q13829 316 aa10.74□□□□□ -0.69
NIF3L1-208ENST00000436412 SLC4A8Q2Y0W8 1093 aa10.74□□□□□ -0.69
NIF3L1-208ENST00000436412 C15orf52Q6ZUT6 534 aaKnown RBP10.74□□□□□ -0.69
NIF3L1-208ENST00000436412 PTPN18Q99952 460 aa10.74□□□□□ -0.69
NIF3L1-208ENST00000436412 PLA2G12BQ9BX93 195 aa10.74□□□□□ -0.69
NIF3L1-208ENST00000436412 ZNF395Q9H8N7 513 aaPredicted RBP10.74□□□□□ -0.69
NIF3L1-208ENST00000436412 ZFYVE28Q9HCC9 887 aa10.74□□□□□ -0.69
NIF3L1-208ENST00000436412 ECM29Q5VYK3 1845 aa10.74□□□□□ -0.69
NIF3L1-208ENST00000436412 SSC5DA1L4H1 1573 aa10.73□□□□□ -0.69
NIF3L1-208ENST00000436412 PI4KAP2A4QPH2 592 aa10.73□□□□□ -0.69
NIF3L1-208ENST00000436412 H7C1W4 665 aa10.73□□□□□ -0.69
NIF3L1-208ENST00000436412 ELL2O00472 640 aaPredicted RBP10.73□□□□□ -0.69
NIF3L1-208ENST00000436412 GNRH1P01148 92 aa10.73□□□□□ -0.69
NIF3L1-208ENST00000436412 ITGA6P23229 1130 aa10.73□□□□□ -0.69
NIF3L1-208ENST00000436412 GTF2A2P52657 109 aa10.73□□□□□ -0.69
NIF3L1-208ENST00000436412 CFAP100Q494V2 611 aa10.73□□□□□ -0.69
NIF3L1-208ENST00000436412 NBPF12Q5TAG4 269 aaPredicted RBP10.73□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms