RNA–Protein interactions for RNA: ENST00000435070.6

CPSF6-202, Transcript of cleavage and polyadenylation specific factor 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CPSF6, Length 6,616 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF6-202ENST00000435070 FILIP1LQ4L180 1135 aa8.4□□□□□ -1.06
CPSF6-202ENST00000435070 CCDC122Q5T0U0 273 aa8.4□□□□□ -1.06
CPSF6-202ENST00000435070 CCNI2Q6ZMN8 369 aaPredicted RBP8.4□□□□□ -1.06
CPSF6-202ENST00000435070 BRAPQ7Z569 592 aa8.4□□□□□ -1.06
CPSF6-202ENST00000435070 SMARCAL1Q9NZC9 954 aa8.4□□□□□ -1.06
CPSF6-202ENST00000435070 GCFC2P16383 781 aaKnown RBP8.4□□□□□ -1.07
CPSF6-202ENST00000435070 ZNF18P17022 549 aa8.4□□□□□ -1.07
CPSF6-202ENST00000435070 DNA2P51530 1060 aa8.4□□□□□ -1.07
CPSF6-202ENST00000435070 EXOSC10Q01780 885 aaKnown RBP8.4□□□□□ -1.07
CPSF6-202ENST00000435070 PPANQ9NQ55 473 aaKnown RBP8.4□□□□□ -1.07
CPSF6-202ENST00000435070 SEC31BQ9NQW1 1179 aa8.4□□□□□ -1.07
CPSF6-202ENST00000435070 UTP3Q9NQZ2 479 aaKnown RBP eCLIP8.4□□□□□ -1.079e-7■■■■■ 39.5
CPSF6-202ENST00000435070 DMGDHQ9UI17 866 aaKnown RBP8.4□□□□□ -1.07
CPSF6-202ENST00000435070 HECW2Q9P2P5 1572 aa8.4□□□□□ -1.07
CPSF6-202ENST00000435070 PRAMEF22A3QJZ6 481 aa8.39□□□□□ -1.07
CPSF6-202ENST00000435070 GYPCP04921 128 aa8.39□□□□□ -1.07
CPSF6-202ENST00000435070 USP49Q70CQ1 688 aa8.39□□□□□ -1.07
CPSF6-202ENST00000435070 DDX20Q9UHI6 824 aaKnown RBP8.39□□□□□ -1.07
CPSF6-202ENST00000435070 EIF4E1BA6NMX2 242 aaKnown RBP8.39□□□□□ -1.07
CPSF6-202ENST00000435070 TTC39AQ5SRH9 613 aa8.39□□□□□ -1.07
CPSF6-202ENST00000435070 SLC40A1Q9NP59 571 aa8.39□□□□□ -1.07
CPSF6-202ENST00000435070 WWC3Q9ULE0 1092 aa8.39□□□□□ -1.07
CPSF6-202ENST00000435070 SALL1Q9NSC2 1324 aa8.39□□□□□ -1.07
CPSF6-202ENST00000435070 MROH1Q8NDA8 1641 aa8.39□□□□□ -1.07
CPSF6-202ENST00000435070 MACROD2A1Z1Q3 448 aa8.39□□□□□ -1.07
CPSF6-202ENST00000435070 GRM8O00222 908 aa8.39□□□□□ -1.07
CPSF6-202ENST00000435070 PDE2AO00408 941 aaPredicted RBP8.39□□□□□ -1.07
CPSF6-202ENST00000435070 MYO1BO43795 1136 aa8.39□□□□□ -1.07
CPSF6-202ENST00000435070 HPDP32754 393 aaPredicted RBP8.39□□□□□ -1.07
CPSF6-202ENST00000435070 PREPLQ4J6C6 727 aaPredicted RBP8.39□□□□□ -1.07
CPSF6-202ENST00000435070 CCDC13Q8IYE1 715 aa8.39□□□□□ -1.07
CPSF6-202ENST00000435070 ENOX1Q8TC92 643 aaKnown RBP8.39□□□□□ -1.07
CPSF6-202ENST00000435070 KAZALD1Q96I82 304 aa8.39□□□□□ -1.07
CPSF6-202ENST00000435070 RAPGEF3O95398 923 aa8.39□□□□□ -1.07
CPSF6-202ENST00000435070 KIAA1328Q86T90 577 aa8.39□□□□□ -1.07
CPSF6-202ENST00000435070 JAKMIP2Q96AA8 810 aa8.39□□□□□ -1.07
CPSF6-202ENST00000435070 ZNF274Q96GC6 653 aaPredicted RBP8.39□□□□□ -1.07
CPSF6-202ENST00000435070 TAB2Q9NYJ8 693 aa8.39□□□□□ -1.07
CPSF6-202ENST00000435070 MAPK8IP1Q9UQF2 711 aa8.39□□□□□ -1.07
CPSF6-202ENST00000435070 GOLGA6L7A0A1B0GV03 622 aa8.39□□□□□ -1.07
CPSF6-202ENST00000435070 PRC1O43663 620 aa8.39□□□□□ -1.07
CPSF6-202ENST00000435070 EZRP15311 586 aaKnown RBP8.39□□□□□ -1.07
CPSF6-202ENST00000435070 TUBB4BP68371 445 aa8.39□□□□□ -1.07
CPSF6-202ENST00000435070 AMPD2Q01433 879 aa8.39□□□□□ -1.07
CPSF6-202ENST00000435070 KRT40Q6A162 431 aa8.39□□□□□ -1.07
CPSF6-202ENST00000435070 HPSEQ9Y251 543 aa8.39□□□□□ -1.07
CPSF6-202ENST00000435070 ENO4A6NNW6 628 aa8.39□□□□□ -1.07
CPSF6-202ENST00000435070 HDLBPQ00341 1268 aaKnown RBP8.39□□□□□ -1.07
CPSF6-202ENST00000435070 TUBB2AQ13885 445 aa8.39□□□□□ -1.07
CPSF6-202ENST00000435070 TSR1Q2NL82 804 aaKnown RBP8.39□□□□□ -1.07
CPSF6-202ENST00000435070 TSEN2Q8NCE0 465 aaKnown RBP8.39□□□□□ -1.07
CPSF6-202ENST00000435070 EEF2KMTQ96G04 330 aa8.39□□□□□ -1.07
CPSF6-202ENST00000435070 TUBB2BQ9BVA1 445 aa8.39□□□□□ -1.07
CPSF6-202ENST00000435070 SNRKQ9NRH2 765 aa8.39□□□□□ -1.07
CPSF6-202ENST00000435070 KCTD19Q17RG1 926 aaPredicted RBP8.38□□□□□ -1.07
CPSF6-202ENST00000435070 EPHA10Q5JZY3 1008 aa8.38□□□□□ -1.07
CPSF6-202ENST00000435070 MICU3Q86XE3 530 aa8.38□□□□□ -1.07
CPSF6-202ENST00000435070 TTC5Q8N0Z6 440 aa8.38□□□□□ -1.07
CPSF6-202ENST00000435070 A0A1B0GTH6 734 aa8.38□□□□□ -1.07
CPSF6-202ENST00000435070 A0A1B0GUA9 196 aa8.38□□□□□ -1.07
CPSF6-202ENST00000435070 EME2A4GXA9 379 aaPredicted RBP8.38□□□□□ -1.07
CPSF6-202ENST00000435070 E7EVH7 732 aa8.38□□□□□ -1.07
CPSF6-202ENST00000435070 HSPD1P10809 573 aaKnown RBP8.38□□□□□ -1.07
CPSF6-202ENST00000435070 CXCR5P32302 372 aa8.38□□□□□ -1.07
CPSF6-202ENST00000435070 WASHC4Q2M389 1173 aa8.38□□□□□ -1.07
CPSF6-202ENST00000435070 MLKLQ8NB16 471 aa8.38□□□□□ -1.07
CPSF6-202ENST00000435070 RNPC3Q96LT9 517 aaKnown RBP8.38□□□□□ -1.07
CPSF6-202ENST00000435070 MYL10Q9BUA6 226 aa8.38□□□□□ -1.07
CPSF6-202ENST00000435070 HAUS2Q9NVX0 235 aa8.38□□□□□ -1.07
CPSF6-202ENST00000435070 ERCC6L2Q5T890 1561 aa8.38□□□□□ -1.07
CPSF6-202ENST00000435070 MCM3P25205 808 aa8.38□□□□□ -1.07
CPSF6-202ENST00000435070 TTMPQ5BVD1 217 aa8.38□□□□□ -1.07
CPSF6-202ENST00000435070 NAA35Q5VZE5 725 aa8.38□□□□□ -1.07
CPSF6-202ENST00000435070 CNGA4Q8IV77 575 aa8.38□□□□□ -1.07
CPSF6-202ENST00000435070 FMNL3Q8IVF7 1028 aa8.38□□□□□ -1.07
CPSF6-202ENST00000435070 EPN1Q9Y6I3 576 aaPredicted RBP8.38□□□□□ -1.07
CPSF6-202ENST00000435070 ANKRD26Q9UPS8 1709 aa8.38□□□□□ -1.07
CPSF6-202ENST00000435070 ACEP12821 1306 aa8.38□□□□□ -1.07
CPSF6-202ENST00000435070 OPLAHO14841 1288 aa8.38□□□□□ -1.07
CPSF6-202ENST00000435070 C21orf2O43822 256 aa8.38□□□□□ -1.07
CPSF6-202ENST00000435070 NNTQ13423 1086 aa8.38□□□□□ -1.07
CPSF6-202ENST00000435070 TMTC1Q8IUR5 882 aa8.38□□□□□ -1.07
CPSF6-202ENST00000435070 STAG1Q8WVM7 1258 aa8.38□□□□□ -1.07
CPSF6-202ENST00000435070 THOC1Q96FV9 657 aaKnown RBP8.38□□□□□ -1.07
CPSF6-202ENST00000435070 LRRC1Q9BTT6 524 aa8.38□□□□□ -1.07
CPSF6-202ENST00000435070 EHD2Q9NZN4 543 aa8.38□□□□□ -1.07
CPSF6-202ENST00000435070 BAIAP2L1Q9UHR4 511 aa8.38□□□□□ -1.07
CPSF6-202ENST00000435070 AGLP35573 1532 aa8.38□□□□□ -1.07
CPSF6-202ENST00000435070 ZPR1O75312 459 aa8.38□□□□□ -1.07
CPSF6-202ENST00000435070 SNCBQ16143 134 aa8.38□□□□□ -1.07
CPSF6-202ENST00000435070 KIF9Q9HAQ2 790 aa8.38□□□□□ -1.07
CPSF6-202ENST00000435070 DACH1Q9UI36 760 aa8.38□□□□□ -1.07
CPSF6-202ENST00000435070 DUSP10Q9Y6W6 482 aa8.38□□□□□ -1.07
CPSF6-202ENST00000435070 HSF2BPO75031 334 aa8.37□□□□□ -1.07
CPSF6-202ENST00000435070 TIMM10P62072 90 aa8.37□□□□□ -1.07
CPSF6-202ENST00000435070 RESP18Q5W5W9 173 aa8.37□□□□□ -1.07
CPSF6-202ENST00000435070 CCDC70Q6NSX1 233 aa8.37□□□□□ -1.07
CPSF6-202ENST00000435070 RALYLQ86SE5 291 aaKnown RBP8.37□□□□□ -1.07
CPSF6-202ENST00000435070 CCDC43Q96MW1 224 aaKnown RBP8.37□□□□□ -1.07
CPSF6-202ENST00000435070 PPP1R1BQ9UD71 204 aaPredicted RBP8.37□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 14.8 ms