RNA–Protein interactions for RNA: ENST00000434342.5

SEMA3F-206, Transcript of semaphorin 3F, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SEMA3F, Length 3,541 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA3F-206ENST00000434342 RTN1Q16799 776 aa13.96□□□□□ -0.17
SEMA3F-206ENST00000434342 CCDC91Q7Z6B0 441 aa13.96□□□□□ -0.17
SEMA3F-206ENST00000434342 ZBTB12Q9Y330 459 aaPredicted RBP13.96□□□□□ -0.17
SEMA3F-206ENST00000434342 TJP1Q07157 1748 aa13.96□□□□□ -0.18
SEMA3F-206ENST00000434342 FOXN1O15353 648 aa13.95□□□□□ -0.18
SEMA3F-206ENST00000434342 NR5A1Q13285 461 aa13.95□□□□□ -0.18
SEMA3F-206ENST00000434342 TMCO3Q6UWJ1 677 aa13.95□□□□□ -0.18
SEMA3F-206ENST00000434342 CCAR2Q8N163 923 aaKnown RBP13.95□□□□□ -0.18
SEMA3F-206ENST00000434342 LAMA4Q16363 1823 aa13.95□□□□□ -0.18
SEMA3F-206ENST00000434342 LAMB4A4D0S4 1761 aa13.95□□□□□ -0.18
SEMA3F-206ENST00000434342 PTPAQ15257 358 aa13.95□□□□□ -0.18
SEMA3F-206ENST00000434342 PRPF38AQ8NAV1 312 aaKnown RBP13.95□□□□□ -0.18
SEMA3F-206ENST00000434342 ANKRD20A12PQ8NF67 263 aa13.95□□□□□ -0.18
SEMA3F-206ENST00000434342 UBAC1Q9BSL1 405 aa13.95□□□□□ -0.18
SEMA3F-206ENST00000434342 KRT23Q9C075 422 aa13.95□□□□□ -0.18
SEMA3F-206ENST00000434342 CRKLP46109 303 aaKnown RBP13.95□□□□□ -0.18
SEMA3F-206ENST00000434342 UBASH3AP57075 661 aa13.95□□□□□ -0.18
SEMA3F-206ENST00000434342 NCAPHQ15003 741 aa13.95□□□□□ -0.18
SEMA3F-206ENST00000434342 CCDC152Q4G0S7 254 aa13.95□□□□□ -0.18
SEMA3F-206ENST00000434342 OLFM4Q6UX06 510 aa13.95□□□□□ -0.18
SEMA3F-206ENST00000434342 BICDL1Q6ZP65 573 aa13.95□□□□□ -0.18
SEMA3F-206ENST00000434342 SGMS1Q86VZ5 419 aa13.95□□□□□ -0.18
SEMA3F-206ENST00000434342 CALR3Q96L12 384 aaKnown RBP13.95□□□□□ -0.18
SEMA3F-206ENST00000434342 PCDHA5Q9Y5H7 936 aa13.95□□□□□ -0.18
SEMA3F-206ENST00000434342 NRDCO43847 1150 aa13.94□□□□□ -0.18
SEMA3F-206ENST00000434342 PRDM1O75626 825 aa13.94□□□□□ -0.18
SEMA3F-206ENST00000434342 ECM2O94769 699 aaPredicted RBP13.94□□□□□ -0.18
SEMA3F-206ENST00000434342 GRIN1Q05586 938 aa13.94□□□□□ -0.18
SEMA3F-206ENST00000434342 GOLGA8FQ08AF8 430 aa13.94□□□□□ -0.18
SEMA3F-206ENST00000434342 GOLGA8DPQ0D2H9 430 aa13.94□□□□□ -0.18
SEMA3F-206ENST00000434342 ARMCX5Q6P1M9 558 aa13.94□□□□□ -0.18
SEMA3F-206ENST00000434342 HOMER1Q86YM7 354 aa13.94□□□□□ -0.18
SEMA3F-206ENST00000434342 CREBRFQ8IUR6 639 aa13.94□□□□□ -0.18
SEMA3F-206ENST00000434342 NOSTRINQ8IVI9 506 aa13.94□□□□□ -0.18
SEMA3F-206ENST00000434342 LIFRP42702 1097 aa13.94□□□□□ -0.18
SEMA3F-206ENST00000434342 GYG1P46976 350 aa13.94□□□□□ -0.18
SEMA3F-206ENST00000434342 MAP3K14Q99558 947 aa13.94□□□□□ -0.18
SEMA3F-206ENST00000434342 CNNM2Q9H8M5 875 aa13.94□□□□□ -0.18
SEMA3F-206ENST00000434342 CCDC87Q9NVE4 849 aa13.94□□□□□ -0.18
SEMA3F-206ENST00000434342 BCL9O00512 1426 aa13.94□□□□□ -0.18
SEMA3F-206ENST00000434342 PPP6R2O75170 966 aa13.94□□□□□ -0.18
SEMA3F-206ENST00000434342 CHRNDQ07001 517 aa13.94□□□□□ -0.18
SEMA3F-206ENST00000434342 FOXP4Q8IVH2 680 aaPredicted RBP13.94□□□□□ -0.18
SEMA3F-206ENST00000434342 KRI1Q8N9T8 703 aaKnown RBP13.94□□□□□ -0.18
SEMA3F-206ENST00000434342 DPF2Q92785 391 aa13.94□□□□□ -0.18
SEMA3F-206ENST00000434342 EIF5P55010 431 aaKnown RBP13.93□□□□□ -0.18
SEMA3F-206ENST00000434342 KCNQ4P56696 695 aa13.93□□□□□ -0.18
SEMA3F-206ENST00000434342 FANCLQ9NW38 375 aa13.93□□□□□ -0.18
SEMA3F-206ENST00000434342 EIF3CLB5ME19 914 aaKnown RBP13.93□□□□□ -0.18
SEMA3F-206ENST00000434342 MNAT1P51948 309 aa13.93□□□□□ -0.18
SEMA3F-206ENST00000434342 AKAP17AQ02040 695 aaKnown RBP13.93□□□□□ -0.18
SEMA3F-206ENST00000434342 ALX1Q15699 326 aa13.93□□□□□ -0.18
SEMA3F-206ENST00000434342 ZNF827Q17R98 1081 aa13.93□□□□□ -0.18
SEMA3F-206ENST00000434342 GRIPAP1Q4V328 841 aa13.93□□□□□ -0.18
SEMA3F-206ENST00000434342 GRAMD1CQ8IYS0 662 aa13.93□□□□□ -0.18
SEMA3F-206ENST00000434342 EIF3CQ99613 913 aaKnown RBP13.93□□□□□ -0.18
SEMA3F-206ENST00000434342 CABP5Q9NP86 173 aa13.93□□□□□ -0.18
SEMA3F-206ENST00000434342 NUP188Q5SRE5 1749 aa13.93□□□□□ -0.18
SEMA3F-206ENST00000434342 CYP2D7A0A087X1C5 515 aa13.93□□□□□ -0.18
SEMA3F-206ENST00000434342 POLR2DO15514 142 aaKnown RBP13.93□□□□□ -0.18
SEMA3F-206ENST00000434342 FMNL1O95466 1100 aaPredicted RBP13.93□□□□□ -0.18
SEMA3F-206ENST00000434342 IFNAR1P17181 557 aa13.93□□□□□ -0.18
SEMA3F-206ENST00000434342 MYL5Q02045 173 aa13.93□□□□□ -0.18
SEMA3F-206ENST00000434342 LRCH2Q5VUJ6 765 aa13.93□□□□□ -0.18
SEMA3F-206ENST00000434342 METTL16Q86W50 562 aaKnown RBP13.93□□□□□ -0.18
SEMA3F-206ENST00000434342 OXER1Q8TDS5 423 aa13.93□□□□□ -0.18
SEMA3F-206ENST00000434342 WASF1Q92558 559 aa13.93□□□□□ -0.18
SEMA3F-206ENST00000434342 PARP4Q9UKK3 1724 aaKnown RBP13.92□□□□□ -0.18
SEMA3F-206ENST00000434342 CUTAO60888 179 aa13.92□□□□□ -0.18
SEMA3F-206ENST00000434342 INTS5Q6P9B9 1019 aaKnown RBP13.92□□□□□ -0.18
SEMA3F-206ENST00000434342 SMIM5Q71RC9 77 aa13.92□□□□□ -0.18
SEMA3F-206ENST00000434342 RPAINQ86UA6 219 aa13.92□□□□□ -0.18
SEMA3F-206ENST00000434342 OSBPL5Q9H0X9 879 aaPredicted RBP13.92□□□□□ -0.18
SEMA3F-206ENST00000434342 SLC24A3Q9HC58 644 aa13.92□□□□□ -0.18
SEMA3F-206ENST00000434342 IMPACTQ9P2X3 320 aa13.92□□□□□ -0.18
SEMA3F-206ENST00000434342 HPSEQ9Y251 543 aa13.92□□□□□ -0.18
SEMA3F-206ENST00000434342 PCDHB6Q9Y5E3 794 aa13.92□□□□□ -0.18
SEMA3F-206ENST00000434342 DDB1Q16531 1140 aa13.92□□□□□ -0.18
SEMA3F-206ENST00000434342 RESP18Q5W5W9 173 aa13.92□□□□□ -0.18
SEMA3F-206ENST00000434342 E4F1Q66K89 784 aaPredicted RBP13.92□□□□□ -0.18
SEMA3F-206ENST00000434342 BPIFA3Q9BQP9 254 aa13.92□□□□□ -0.18
SEMA3F-206ENST00000434342 LOC102724428A0A0B4J2F2 783 aa13.91□□□□□ -0.18
SEMA3F-206ENST00000434342 SIK1P57059 783 aa13.91□□□□□ -0.18
SEMA3F-206ENST00000434342 ADGRA1Q86SQ6 560 aa13.91□□□□□ -0.18
SEMA3F-206ENST00000434342 FAM177A1Q8N128 213 aaPredicted RBP13.91□□□□□ -0.18
SEMA3F-206ENST00000434342 FANCBQ8NB91 859 aa13.91□□□□□ -0.18
SEMA3F-206ENST00000434342 MMP1P03956 469 aa13.91□□□□□ -0.18
SEMA3F-206ENST00000434342 SCP2P22307 547 aa13.91□□□□□ -0.18
SEMA3F-206ENST00000434342 TOB1P50616 345 aaPredicted RBP13.91□□□□□ -0.18
SEMA3F-206ENST00000434342 PPARAQ07869 468 aa13.91□□□□□ -0.18
SEMA3F-206ENST00000434342 LEKR1Q6ZMV7 388 aa13.91□□□□□ -0.18
SEMA3F-206ENST00000434342 NYAP1Q6ZVC0 841 aa13.91□□□□□ -0.18
SEMA3F-206ENST00000434342 ZNF654Q8IZM8 581 aa13.91□□□□□ -0.18
SEMA3F-206ENST00000434342 CCDC150Q8NCX0 1101 aa13.91□□□□□ -0.18
SEMA3F-206ENST00000434342 SLC4A8Q2Y0W8 1093 aa13.91□□□□□ -0.18
SEMA3F-206ENST00000434342 USP49Q70CQ1 688 aa13.91□□□□□ -0.18
SEMA3F-206ENST00000434342 TRMT44Q8IYL2 757 aaKnown RBP13.91□□□□□ -0.18
SEMA3F-206ENST00000434342 AK7Q96M32 723 aa13.91□□□□□ -0.18
SEMA3F-206ENST00000434342 VPS54Q9P1Q0 977 aa13.91□□□□□ -0.18
SEMA3F-206ENST00000434342 SERTAD1Q9UHV2 236 aa13.91□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms