RNA–Protein interactions for RNA: ENST00000433909.2

CCDC189-201, Transcript of coiled-coil domain containing 189, humanhuman

TSL 2

Gene CCDC189, Length 1,157 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC189-201ENST00000433909 SIPA1L1O43166 1804 aa23.77■■□□□ 1.4
CCDC189-201ENST00000433909 MYO5AQ9Y4I1 1855 aaKnown RBP23.77■■□□□ 1.4
CCDC189-201ENST00000433909 LOC285556D6RIA3 1793 aa23.76■■□□□ 1.39
CCDC189-201ENST00000433909 SHROOM1Q2M3G4 852 aaPredicted RBP23.76■■□□□ 1.39
CCDC189-201ENST00000433909 HABP4Q5JVS0 413 aaKnown RBP23.76■■□□□ 1.39
CCDC189-201ENST00000433909 CERS3Q8IU89 383 aa23.76■■□□□ 1.39
CCDC189-201ENST00000433909 PXYLP1Q8TE99 480 aa23.76■■□□□ 1.39
CCDC189-201ENST00000433909 GINM1Q9NU53 330 aa23.76■■□□□ 1.39
CCDC189-201ENST00000433909 ZBTB21Q9ULJ3 1066 aa23.76■■□□□ 1.39
CCDC189-201ENST00000433909 INHAP05111 366 aa23.75■■□□□ 1.39
CCDC189-201ENST00000433909 IRX3P78415 501 aaPredicted RBP23.75■■□□□ 1.39
CCDC189-201ENST00000433909 RHPN1Q8TCX5 695 aa23.75■■□□□ 1.39
CCDC189-201ENST00000433909 U2AF1L4Q8WU68 220 aaKnown RBP23.75■■□□□ 1.39
CCDC189-201ENST00000433909 CDK5RAP2Q96SN8 1893 aa23.73■■□□□ 1.39
CCDC189-201ENST00000433909 C19orf81C9J6K1 198 aa23.73■■□□□ 1.39
CCDC189-201ENST00000433909 USP17L10C9JJH3 530 aa23.73■■□□□ 1.39
CCDC189-201ENST00000433909 APBB1O00213 710 aa23.73■■□□□ 1.39
CCDC189-201ENST00000433909 TMED8Q6PL24 325 aaPredicted RBP23.73■■□□□ 1.39
CCDC189-201ENST00000433909 DPF3Q92784 378 aa23.73■■□□□ 1.39
CCDC189-201ENST00000433909 DDX19BQ9UMR2 479 aa23.73■■□□□ 1.39
CCDC189-201ENST00000433909 FOCADQ5VW36 1801 aa23.73■■□□□ 1.39
CCDC189-201ENST00000433909 H0YGN5 161 aa23.72■■□□□ 1.39
CCDC189-201ENST00000433909 HOXA7P31268 230 aaPredicted RBP23.72■■□□□ 1.39
CCDC189-201ENST00000433909 RPAP2Q8IXW5 612 aaPredicted RBP23.72■■□□□ 1.39
CCDC189-201ENST00000433909 CLASRPQ8N2M8 674 aaKnown RBP23.72■■□□□ 1.39
CCDC189-201ENST00000433909 P2RX7Q99572 595 aaKnown RBP23.72■■□□□ 1.39
CCDC189-201ENST00000433909 PCDH10Q9P2E7 1040 aa23.72■■□□□ 1.39
CCDC189-201ENST00000433909 COG6Q9Y2V7 657 aa23.72■■□□□ 1.39
CCDC189-201ENST00000433909 HMMRO75330 724 aa23.71■■□□□ 1.39
CCDC189-201ENST00000433909 SGPL1O95470 568 aa23.71■■□□□ 1.39
CCDC189-201ENST00000433909 GH2P01242 217 aa23.71■■□□□ 1.39
CCDC189-201ENST00000433909 TTF1Q15361 905 aaPredicted RBP23.71■■□□□ 1.39
CCDC189-201ENST00000433909 KIF1BPQ96EK5 621 aa23.71■■□□□ 1.39
CCDC189-201ENST00000433909 BCL11AQ9H165 835 aa23.71■■□□□ 1.39
CCDC189-201ENST00000433909 MORF4L1Q9UBU8 362 aa23.71■■□□□ 1.39
CCDC189-201ENST00000433909 SERPINB13Q9UIV8 391 aa23.71■■□□□ 1.39
CCDC189-201ENST00000433909 DOCK3Q8IZD9 2030 aa23.71■■□□□ 1.39
CCDC189-201ENST00000433909 FARP2O94887 1054 aaPredicted RBP23.7■■□□□ 1.38
CCDC189-201ENST00000433909 UBE2Q1Q7Z7E8 422 aa23.7■■□□□ 1.38
CCDC189-201ENST00000433909 TTC6Q86TZ1 520 aa23.7■■□□□ 1.38
CCDC189-201ENST00000433909 DEFB118Q96PH6 123 aa23.7■■□□□ 1.38
CCDC189-201ENST00000433909 HTATIP2Q9BUP3 242 aa23.7■■□□□ 1.38
CCDC189-201ENST00000433909 EHD4Q9H223 541 aa23.7■■□□□ 1.38
CCDC189-201ENST00000433909 IFIT2P09913 472 aaKnown RBP23.69■■□□□ 1.38
CCDC189-201ENST00000433909 HERVK_113P62684 666 aa23.69■■□□□ 1.38
CCDC189-201ENST00000433909 TATDN1Q6P1N9 297 aa23.69■■□□□ 1.38
CCDC189-201ENST00000433909 RIOK1Q9BRS2 568 aaKnown RBP23.69■■□□□ 1.38
CCDC189-201ENST00000433909 ZBTB40Q9NUA8 1239 aa23.69■■□□□ 1.38
CCDC189-201ENST00000433909 COLQQ9Y215 455 aaPredicted RBP23.69■■□□□ 1.38
CCDC189-201ENST00000433909 TRIOBPQ9H2D6 2365 aa23.69■■□□□ 1.38
CCDC189-201ENST00000433909 MAGEB6P1A0A0J9YX57 407 aa23.68■■□□□ 1.38
CCDC189-201ENST00000433909 TFRCP02786 760 aaKnown RBP23.68■■□□□ 1.38
CCDC189-201ENST00000433909 SLC9C2Q5TAH2 1124 aa23.68■■□□□ 1.38
CCDC189-201ENST00000433909 USP17L2Q6R6M4 530 aa23.68■■□□□ 1.38
CCDC189-201ENST00000433909 SIRT2Q8IXJ6 389 aa23.68■■□□□ 1.38
CCDC189-201ENST00000433909 DNAJC2Q99543 621 aaKnown RBP23.68■■□□□ 1.38
CCDC189-201ENST00000433909 EMILIN3Q9NT22 766 aa23.68■■□□□ 1.38
CCDC189-201ENST00000433909 GJD2Q9UKL4 321 aa23.68■■□□□ 1.38
CCDC189-201ENST00000433909 GOLIM4O00461 696 aa23.67■■□□□ 1.38
CCDC189-201ENST00000433909 PEX10O60683 326 aa23.67■■□□□ 1.38
CCDC189-201ENST00000433909 PDE6AP16499 860 aa23.67■■□□□ 1.38
CCDC189-201ENST00000433909 GPRC5AQ8NFJ5 357 aa23.67■■□□□ 1.38
CCDC189-201ENST00000433909 PPIL4Q8WUA2 492 aaKnown RBP eCLIP23.67■■□□□ 1.38
CCDC189-201ENST00000433909 FEZ1Q99689 392 aa23.67■■□□□ 1.38
CCDC189-201ENST00000433909 TXNRD2Q9NNW7 524 aa23.67■■□□□ 1.38
CCDC189-201ENST00000433909 PAK6Q9NQU5 681 aaPredicted RBP23.67■■□□□ 1.38
CCDC189-201ENST00000433909 MYH1P12882 1939 aa23.67■■□□□ 1.38
CCDC189-201ENST00000433909 RAB11FIP3O75154 756 aa23.66■■□□□ 1.38
CCDC189-201ENST00000433909 HMGCRP04035 888 aa23.66■■□□□ 1.38
CCDC189-201ENST00000433909 POLR3DP05423 398 aaPredicted RBP23.66■■□□□ 1.38
CCDC189-201ENST00000433909 RAB3GAP1Q15042 981 aa23.66■■□□□ 1.38
CCDC189-201ENST00000433909 ZYXQ15942 572 aaKnown RBP23.66■■□□□ 1.38
CCDC189-201ENST00000433909 CERKLQ49MI3 558 aaPredicted RBP23.66■■□□□ 1.38
CCDC189-201ENST00000433909 CRNKL1Q9BZJ0 848 aaKnown RBP23.66■■□□□ 1.38
CCDC189-201ENST00000433909 CHMP4BQ9H444 224 aaKnown RBP23.66■■□□□ 1.38
CCDC189-201ENST00000433909 CAPN2P17655 700 aa23.65■■□□□ 1.38
CCDC189-201ENST00000433909 PLCD1P51178 756 aa23.65■■□□□ 1.38
CCDC189-201ENST00000433909 ABCB5Q2M3G0 1257 aa23.65■■□□□ 1.38
CCDC189-201ENST00000433909 PAGR1Q9BTK6 254 aa23.65■■□□□ 1.38
CCDC189-201ENST00000433909 XRN2Q9H0D6 950 aaKnown RBP eCLIP23.65■■□□□ 1.38
CCDC189-201ENST00000433909 RBPJLQ9UBG7 517 aa23.65■■□□□ 1.38
CCDC189-201ENST00000433909 RCAN3Q9UKA8 241 aa23.65■■□□□ 1.38
CCDC189-201ENST00000433909 ZNF532Q9HCE3 1301 aa23.64■■□□□ 1.38
CCDC189-201ENST00000433909 GTF3C2Q8WUA4 911 aaPredicted RBP23.64■■□□□ 1.37
CCDC189-201ENST00000433909 CABP5Q9NP86 173 aa23.64■■□□□ 1.37
CCDC189-201ENST00000433909 CYP2B6P20813 491 aa23.63■■□□□ 1.37
CCDC189-201ENST00000433909 SHMT1P34896 483 aa23.63■■□□□ 1.37
CCDC189-201ENST00000433909 USP14P54578 494 aa23.63■■□□□ 1.37
CCDC189-201ENST00000433909 ERVK-9P63128 1117 aa23.63■■□□□ 1.37
CCDC189-201ENST00000433909 ERVK-24P63145 666 aa23.63■■□□□ 1.37
CCDC189-201ENST00000433909 CCAR1Q8IX12 1150 aaKnown RBP23.63■■□□□ 1.37
CCDC189-201ENST00000433909 EDC3Q96F86 508 aaKnown RBP23.63■■□□□ 1.37
CCDC189-201ENST00000433909 C12orf42Q96LP6 360 aa23.63■■□□□ 1.37
CCDC189-201ENST00000433909 CRISPLD2Q9H0B8 497 aa23.63■■□□□ 1.37
CCDC189-201ENST00000433909 MCM9Q9NXL9 1143 aa23.63■■□□□ 1.37
CCDC189-201ENST00000433909 USP17L15C9J2P7 530 aa23.62■■□□□ 1.37
CCDC189-201ENST00000433909 USP17L13C9JLJ4 530 aa23.62■■□□□ 1.37
CCDC189-201ENST00000433909 USP17L11C9JVI0 530 aa23.62■■□□□ 1.37
CCDC189-201ENST00000433909 USP17L18D6R9N7 530 aa23.62■■□□□ 1.37
CCDC189-201ENST00000433909 USP17L22D6RA61 530 aa23.62■■□□□ 1.37
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms