RNA–Protein interactions for RNA: ENST00000433496.5

RFC4-207, Transcript of replication factor C subunit 4, humanhuman

TSL 5 BASIC

Gene RFC4, Length 1,111 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC4-207ENST00000433496 TRIM47Q96LD4 638 aa11.69□□□□□ -0.54
RFC4-207ENST00000433496 CRNKL1Q9BZJ0 848 aaKnown RBP11.69□□□□□ -0.54
RFC4-207ENST00000433496 LRRCC1Q9C099 1032 aa11.69□□□□□ -0.54
RFC4-207ENST00000433496 DDX24Q9GZR7 859 aaKnown RBP eCLIP11.69□□□□□ -0.547e-9■■□□□ 11.5
RFC4-207ENST00000433496 BIN2Q9UBW5 565 aaPredicted RBP11.69□□□□□ -0.54
RFC4-207ENST00000433496 SRRDQ9UH36 339 aa11.69□□□□□ -0.54
RFC4-207ENST00000433496 BAZ2AQ9UIF9 1905 aaKnown RBP11.68□□□□□ -0.54
RFC4-207ENST00000433496 POTEFA5A3E0 1075 aa11.68□□□□□ -0.54
RFC4-207ENST00000433496 TNPO2O14787 897 aaKnown RBP11.68□□□□□ -0.54
RFC4-207ENST00000433496 GDF11O95390 407 aa11.68□□□□□ -0.54
RFC4-207ENST00000433496 BCRP11274 1271 aa11.68□□□□□ -0.54
RFC4-207ENST00000433496 PDE6AP16499 860 aa11.68□□□□□ -0.54
RFC4-207ENST00000433496 IRX3P78415 501 aaPredicted RBP11.68□□□□□ -0.54
RFC4-207ENST00000433496 MTMR2Q13614 643 aa11.68□□□□□ -0.54
RFC4-207ENST00000433496 TREML2Q5T2D2 321 aa11.68□□□□□ -0.54
RFC4-207ENST00000433496 SIRT2Q8IXJ6 389 aa11.68□□□□□ -0.54
RFC4-207ENST00000433496 FEZ1Q99689 392 aa11.68□□□□□ -0.54
RFC4-207ENST00000433496 PAG1Q9NWQ8 432 aa11.68□□□□□ -0.54
RFC4-207ENST00000433496 SERPINB13Q9UIV8 391 aa11.68□□□□□ -0.54
RFC4-207ENST00000433496 ZBTB21Q9ULJ3 1066 aa11.68□□□□□ -0.54
RFC4-207ENST00000433496 ZNF532Q9HCE3 1301 aa11.67□□□□□ -0.54
RFC4-207ENST00000433496 POLR3DP05423 398 aaPredicted RBP11.67□□□□□ -0.54
RFC4-207ENST00000433496 GRK4P32298 578 aa11.67□□□□□ -0.54
RFC4-207ENST00000433496 GCLCP48506 637 aaPredicted RBP11.67□□□□□ -0.54
RFC4-207ENST00000433496 C20orf194Q5TEA3 1177 aa11.67□□□□□ -0.54
RFC4-207ENST00000433496 ANKRD13CQ8N6S4 541 aa11.67□□□□□ -0.54
RFC4-207ENST00000433496 COA7Q96BR5 231 aa11.67□□□□□ -0.54
RFC4-207ENST00000433496 GPATCH3Q96I76 525 aa11.67□□□□□ -0.54
RFC4-207ENST00000433496 WDR18Q9BV38 432 aa11.67□□□□□ -0.54
RFC4-207ENST00000433496 EHD4Q9H223 541 aa11.67□□□□□ -0.54
RFC4-207ENST00000433496 DOCK3Q8IZD9 2030 aa11.67□□□□□ -0.54
RFC4-207ENST00000433496 C19orf81C9J6K1 198 aa11.66□□□□□ -0.54
RFC4-207ENST00000433496 USP17L10C9JJH3 530 aa11.66□□□□□ -0.54
RFC4-207ENST00000433496 ATP5JP18859 108 aa11.66□□□□□ -0.54
RFC4-207ENST00000433496 BACE1P56817 501 aa11.66□□□□□ -0.54
RFC4-207ENST00000433496 UBXN2AP68543 259 aa11.66□□□□□ -0.54
RFC4-207ENST00000433496 PRKCZQ05513 592 aa11.66□□□□□ -0.54
RFC4-207ENST00000433496 RRP1BQ14684 758 aaKnown RBP11.66□□□□□ -0.54
RFC4-207ENST00000433496 FAM110CQ1W6H9 321 aa11.66□□□□□ -0.54
RFC4-207ENST00000433496 PRPF38BQ5VTL8 546 aaKnown RBP11.66□□□□□ -0.54
RFC4-207ENST00000433496 METTL16Q86W50 562 aaKnown RBP11.66□□□□□ -0.54
RFC4-207ENST00000433496 AMOTL1Q8IY63 956 aa11.66□□□□□ -0.54
RFC4-207ENST00000433496 SLAIN1Q8ND83 568 aa11.66□□□□□ -0.54
RFC4-207ENST00000433496 DDRGK1Q96HY6 314 aa11.66□□□□□ -0.54
RFC4-207ENST00000433496 BOLA2Q9H3K6 86 aa11.66□□□□□ -0.54
RFC4-207ENST00000433496 DNAJC18Q9H819 358 aa11.66□□□□□ -0.54
RFC4-207ENST00000433496 CABP5Q9NP86 173 aa11.66□□□□□ -0.54
RFC4-207ENST00000433496 TAOK2Q9UL54 1235 aa11.66□□□□□ -0.54
RFC4-207ENST00000433496 CENPFP49454 3210 aa11.65□□□□□ -0.54
RFC4-207ENST00000433496 GH2P01242 217 aa11.65□□□□□ -0.54
RFC4-207ENST00000433496 EN2P19622 333 aaPredicted RBP11.65□□□□□ -0.54
RFC4-207ENST00000433496 CTGFP29279 349 aa11.65□□□□□ -0.54
RFC4-207ENST00000433496 RAB3GAP1Q15042 981 aa11.65□□□□□ -0.54
RFC4-207ENST00000433496 ABCB5Q2M3G0 1257 aa11.65□□□□□ -0.54
RFC4-207ENST00000433496 CERKLQ49MI3 558 aaPredicted RBP11.65□□□□□ -0.54
RFC4-207ENST00000433496 SH3D19Q5HYK7 790 aa11.65□□□□□ -0.54
RFC4-207ENST00000433496 ZSCAN25Q6NSZ9 544 aa11.65□□□□□ -0.54
RFC4-207ENST00000433496 RIOK1Q9BRS2 568 aaKnown RBP11.65□□□□□ -0.54
RFC4-207ENST00000433496 ASCC2Q9H1I8 757 aaPredicted RBP11.65□□□□□ -0.54
RFC4-207ENST00000433496 MCM9Q9NXL9 1143 aa11.65□□□□□ -0.54
RFC4-207ENST00000433496 USP17L2Q6R6M4 530 aa11.64□□□□□ -0.55
RFC4-207ENST00000433496 CCAR1Q8IX12 1150 aaKnown RBP11.64□□□□□ -0.55
RFC4-207ENST00000433496 NKX2-3Q8TAU0 364 aa11.64□□□□□ -0.55
RFC4-207ENST00000433496 HAUS7Q99871 368 aa11.64□□□□□ -0.55
RFC4-207ENST00000433496 MPHOSPH10O00566 681 aaKnown RBP11.63□□□□□ -0.55
RFC4-207ENST00000433496 SMARCA5O60264 1052 aaPredicted RBP11.63□□□□□ -0.55
RFC4-207ENST00000433496 ADCY3O60266 1144 aa11.63□□□□□ -0.55
RFC4-207ENST00000433496 MBD4O95243 580 aa11.63□□□□□ -0.55
RFC4-207ENST00000433496 FLT3LGP49771 235 aa11.63□□□□□ -0.55
RFC4-207ENST00000433496 USP14P54578 494 aa11.63□□□□□ -0.55
RFC4-207ENST00000433496 ZYXQ15942 572 aaKnown RBP11.63□□□□□ -0.55
RFC4-207ENST00000433496 TATDN1Q6P1N9 297 aa11.63□□□□□ -0.55
RFC4-207ENST00000433496 LCORLQ8N3X6 602 aa11.63□□□□□ -0.55
RFC4-207ENST00000433496 GTF3C2Q8WUA4 911 aaPredicted RBP11.63□□□□□ -0.55
RFC4-207ENST00000433496 EDC3Q96F86 508 aaKnown RBP11.63□□□□□ -0.55
RFC4-207ENST00000433496 RNF208Q9H0X6 261 aa11.63□□□□□ -0.55
RFC4-207ENST00000433496 ARMT1Q9H993 441 aa11.63□□□□□ -0.55
RFC4-207ENST00000433496 CWC22Q9HCG8 908 aaKnown RBP11.63□□□□□ -0.55
RFC4-207ENST00000433496 ECHDC1Q9NTX5 307 aa11.63□□□□□ -0.55
RFC4-207ENST00000433496 ZBTB47Q9UFB7 747 aaPredicted RBP11.63□□□□□ -0.55
RFC4-207ENST00000433496 TCRBV5S4A2TA0A5A2 114 aa11.62□□□□□ -0.55
RFC4-207ENST00000433496 CCL5P13501 91 aa11.62□□□□□ -0.55
RFC4-207ENST00000433496 HOXA7P31268 230 aaPredicted RBP11.62□□□□□ -0.55
RFC4-207ENST00000433496 ADD2P35612 726 aa11.62□□□□□ -0.55
RFC4-207ENST00000433496 HERVK_113P62684 666 aa11.62□□□□□ -0.55
RFC4-207ENST00000433496 JAG1P78504 1218 aa11.62□□□□□ -0.55
RFC4-207ENST00000433496 IRF5Q13568 498 aa11.62□□□□□ -0.55
RFC4-207ENST00000433496 SHROOM1Q2M3G4 852 aaPredicted RBP11.62□□□□□ -0.55
RFC4-207ENST00000433496 SDR42E1Q8WUS8 393 aa11.62□□□□□ -0.55
RFC4-207ENST00000433496 ATP8A2Q9NTI2 1148 aa11.62□□□□□ -0.55
RFC4-207ENST00000433496 GABRQQ9UN88 632 aa11.62□□□□□ -0.55
RFC4-207ENST00000433496 INHAP05111 366 aa11.61□□□□□ -0.55
RFC4-207ENST00000433496 ELNP15502 786 aa11.61□□□□□ -0.55
RFC4-207ENST00000433496 SHMT1P34896 483 aa11.61□□□□□ -0.55
RFC4-207ENST00000433496 PLCD1P51178 756 aa11.61□□□□□ -0.55
RFC4-207ENST00000433496 UBE3CQ15386 1083 aa11.61□□□□□ -0.55
RFC4-207ENST00000433496 MTFR1Q15390 333 aa11.61□□□□□ -0.55
RFC4-207ENST00000433496 LRRFIP1Q32MZ4 808 aaKnown RBP11.61□□□□□ -0.55
RFC4-207ENST00000433496 GPRC5AQ8NFJ5 357 aa11.61□□□□□ -0.55
RFC4-207ENST00000433496 PXYLP1Q8TE99 480 aa11.61□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms