RNA–Protein interactions for RNA: ENST00000433454.3

NEFM-202, Transcript of neurofilament medium, humanhuman

TSL 2 BASIC

Gene NEFM, Length 2,519 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEFM-202ENST00000433454 IDI2Q9BXS1 227 aa12.36□□□□□ -0.43
NEFM-202ENST00000433454 NPM3O75607 178 aaKnown RBP12.35□□□□□ -0.43
NEFM-202ENST00000433454 HLA-DOAP06340 250 aa12.35□□□□□ -0.43
NEFM-202ENST00000433454 RASA1P20936 1047 aa12.35□□□□□ -0.43
NEFM-202ENST00000433454 CXCL9Q07325 125 aa12.35□□□□□ -0.43
NEFM-202ENST00000433454 CCDC178Q5BJE1 867 aa12.35□□□□□ -0.43
NEFM-202ENST00000433454 CIAPIN1Q6FI81 312 aa12.35□□□□□ -0.43
NEFM-202ENST00000433454 CATIPQ7Z7H3 387 aa12.35□□□□□ -0.43
NEFM-202ENST00000433454 MYH8P13535 1937 aa12.35□□□□□ -0.43
NEFM-202ENST00000433454 CCDC196A0A1B0GTZ2 297 aa12.35□□□□□ -0.43
NEFM-202ENST00000433454 H3BQV1 296 aa12.35□□□□□ -0.43
NEFM-202ENST00000433454 NMT2O60551 498 aa12.35□□□□□ -0.43
NEFM-202ENST00000433454 CDC27P30260 824 aa12.35□□□□□ -0.43
NEFM-202ENST00000433454 ADD1P35611 737 aaKnown RBP12.35□□□□□ -0.43
NEFM-202ENST00000433454 RTN1Q16799 776 aa12.35□□□□□ -0.43
NEFM-202ENST00000433454 IFFO2Q5TF58 517 aa12.35□□□□□ -0.43
NEFM-202ENST00000433454 CDC37L1Q7L3B6 337 aa12.35□□□□□ -0.43
NEFM-202ENST00000433454 SERPINB13Q9UIV8 391 aa12.35□□□□□ -0.43
NEFM-202ENST00000433454 ZBTB12Q9Y330 459 aaPredicted RBP12.35□□□□□ -0.43
NEFM-202ENST00000433454 SPDYE2BA6NHP3 402 aa12.34□□□□□ -0.43
NEFM-202ENST00000433454 PPFIA3O75145 1194 aa12.34□□□□□ -0.43
NEFM-202ENST00000433454 DDAH1O94760 285 aa12.34□□□□□ -0.43
NEFM-202ENST00000433454 SPDYE6P0CI01 402 aa12.34□□□□□ -0.43
NEFM-202ENST00000433454 CACNB3P54284 484 aa12.34□□□□□ -0.43
NEFM-202ENST00000433454 RASSF7Q02833 373 aa12.34□□□□□ -0.43
NEFM-202ENST00000433454 TNIP1Q15025 636 aa12.34□□□□□ -0.43
NEFM-202ENST00000433454 PPP2R5BQ15173 497 aa12.34□□□□□ -0.43
NEFM-202ENST00000433454 MCTP1Q6DN14 999 aa12.34□□□□□ -0.43
NEFM-202ENST00000433454 NUP133Q8WUM0 1156 aa12.34□□□□□ -0.43
NEFM-202ENST00000433454 DHX36Q9H2U1 1008 aaKnown RBP12.34□□□□□ -0.43
NEFM-202ENST00000433454 TCP11L1Q9NUJ3 509 aa12.34□□□□□ -0.43
NEFM-202ENST00000433454 TMOD2Q9NZR1 351 aa12.34□□□□□ -0.43
NEFM-202ENST00000433454 ORC3Q9UBD5 711 aaPredicted RBP12.34□□□□□ -0.43
NEFM-202ENST00000433454 SWAP70Q9UH65 585 aa12.34□□□□□ -0.43
NEFM-202ENST00000433454 CALM1P0DP23 149 aa12.34□□□□□ -0.43
NEFM-202ENST00000433454 CALM2P0DP24 149 aa12.34□□□□□ -0.43
NEFM-202ENST00000433454 CALM3P0DP25 149 aa12.34□□□□□ -0.43
NEFM-202ENST00000433454 GABPAQ06546 454 aa12.34□□□□□ -0.43
NEFM-202ENST00000433454 DLGAP5Q15398 846 aa12.34□□□□□ -0.43
NEFM-202ENST00000433454 DGKHQ86XP1 1220 aa12.34□□□□□ -0.43
NEFM-202ENST00000433454 PRMT6Q96LA8 375 aaPredicted RBP12.34□□□□□ -0.43
NEFM-202ENST00000433454 FHDC1Q9C0D6 1143 aaPredicted RBP12.34□□□□□ -0.43
NEFM-202ENST00000433454 EHD4Q9H223 541 aa12.34□□□□□ -0.43
NEFM-202ENST00000433454 TDRD3Q9H7E2 651 aaKnown RBP12.34□□□□□ -0.43
NEFM-202ENST00000433454 FAM217BQ9NTX9 383 aaPredicted RBP12.34□□□□□ -0.43
NEFM-202ENST00000433454 FDPSP14324 419 aaKnown RBP12.33□□□□□ -0.44
NEFM-202ENST00000433454 FANCBQ8NB91 859 aa12.33□□□□□ -0.44
NEFM-202ENST00000433454 FAM198AQ9UFP1 575 aa12.33□□□□□ -0.44
NEFM-202ENST00000433454 TCP10Q12799 353 aa12.33□□□□□ -0.44
NEFM-202ENST00000433454 NTRK3Q16288 839 aa12.33□□□□□ -0.44
NEFM-202ENST00000433454 RCSD1Q6JBY9 416 aa12.33□□□□□ -0.44
NEFM-202ENST00000433454 KAT14Q9H8E8 782 aa12.33□□□□□ -0.44
NEFM-202ENST00000433454 IL17RBQ9NRM6 502 aa12.33□□□□□ -0.44
NEFM-202ENST00000433454 PLIN4Q96Q06 1357 aa12.32□□□□□ -0.44
NEFM-202ENST00000433454 UTRNP46939 3433 aa12.32□□□□□ -0.44
NEFM-202ENST00000433454 STK36Q9NRP7 1315 aa12.32□□□□□ -0.44
NEFM-202ENST00000433454 COL2A1P02458 1487 aaPredicted RBP12.32□□□□□ -0.44
NEFM-202ENST00000433454 ENTPD3O75355 529 aa12.32□□□□□ -0.44
NEFM-202ENST00000433454 IFNAR1P17181 557 aa12.32□□□□□ -0.44
NEFM-202ENST00000433454 TROAPQ12815 778 aa12.32□□□□□ -0.44
NEFM-202ENST00000433454 ZSCAN29Q8IWY8 852 aaPredicted RBP12.32□□□□□ -0.44
NEFM-202ENST00000433454 NEDD1Q8NHV4 660 aa12.32□□□□□ -0.44
NEFM-202ENST00000433454 ANKS1AQ92625 1134 aa12.32□□□□□ -0.44
NEFM-202ENST00000433454 RBM28Q9NW13 759 aaKnown RBP12.32□□□□□ -0.44
NEFM-202ENST00000433454 TAOK2Q9UL54 1235 aa12.32□□□□□ -0.44
NEFM-202ENST00000433454 RPS12P25398 132 aaKnown RBP12.32□□□□□ -0.44
NEFM-202ENST00000433454 MMP14P50281 582 aa12.32□□□□□ -0.44
NEFM-202ENST00000433454 EIF6P56537 245 aaKnown RBP12.32□□□□□ -0.44
NEFM-202ENST00000433454 FOXD4L6Q3SYB3 417 aaPredicted RBP12.32□□□□□ -0.44
NEFM-202ENST00000433454 FOXD4L3Q6VB84 417 aaPredicted RBP12.32□□□□□ -0.44
NEFM-202ENST00000433454 FERMT3Q86UX7 667 aa12.32□□□□□ -0.44
NEFM-202ENST00000433454 ZFPM1Q8IX07 1006 aa12.32□□□□□ -0.44
NEFM-202ENST00000433454 TRIM22Q8IYM9 498 aa12.32□□□□□ -0.44
NEFM-202ENST00000433454 MTMR14Q8NCE2 650 aa12.32□□□□□ -0.44
NEFM-202ENST00000433454 PHKBQ93100 1093 aa12.32□□□□□ -0.44
NEFM-202ENST00000433454 PI4KBQ9UBF8 816 aa12.32□□□□□ -0.44
NEFM-202ENST00000433454 ATRNL1Q5VV63 1379 aa12.31□□□□□ -0.44
NEFM-202ENST00000433454 SIPA1L1O43166 1804 aa12.31□□□□□ -0.44
NEFM-202ENST00000433454 CRACR2BQ8N4Y2 399 aaPredicted RBP12.31□□□□□ -0.44
NEFM-202ENST00000433454 CTCFLQ8NI51 663 aaPredicted RBP12.31□□□□□ -0.44
NEFM-202ENST00000433454 CHAMP1Q96JM3 812 aa12.31□□□□□ -0.44
NEFM-202ENST00000433454 C8orf76Q96K31 380 aa12.31□□□□□ -0.44
NEFM-202ENST00000433454 STX8Q9UNK0 236 aa12.31□□□□□ -0.44
NEFM-202ENST00000433454 FZD9O00144 591 aa12.31□□□□□ -0.44
NEFM-202ENST00000433454 FMNL1O95466 1100 aaPredicted RBP12.31□□□□□ -0.44
NEFM-202ENST00000433454 FOSBP53539 338 aa12.31□□□□□ -0.44
NEFM-202ENST00000433454 SSRP1Q08945 709 aaKnown RBP12.31□□□□□ -0.44
NEFM-202ENST00000433454 SPDYE2Q495Y8 402 aa12.31□□□□□ -0.44
NEFM-202ENST00000433454 ILDR2Q71H61 639 aa12.31□□□□□ -0.44
NEFM-202ENST00000433454 PNMA1Q8ND90 353 aa12.31□□□□□ -0.44
NEFM-202ENST00000433454 SLC26A6Q9BXS9 759 aa12.31□□□□□ -0.44
NEFM-202ENST00000433454 TRIM34Q9BYJ4 488 aa12.31□□□□□ -0.44
NEFM-202ENST00000433454 DDTLA6NHG4 134 aaPredicted RBP12.3□□□□□ -0.44
NEFM-202ENST00000433454 MYO1BO43795 1136 aa12.3□□□□□ -0.44
NEFM-202ENST00000433454 SHMT1P34896 483 aa12.3□□□□□ -0.44
NEFM-202ENST00000433454 PRELPP51888 382 aa12.3□□□□□ -0.44
NEFM-202ENST00000433454 RGS22Q8NE09 1264 aa12.3□□□□□ -0.44
NEFM-202ENST00000433454 WASF1Q92558 559 aa12.3□□□□□ -0.44
NEFM-202ENST00000433454 ZSCAN16Q9H4T2 348 aaPredicted RBP12.3□□□□□ -0.44
NEFM-202ENST00000433454 ZNF70Q9UC06 446 aaPredicted RBP12.3□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms