RNA–Protein interactions for RNA: ENST00000432954.1

CCDC171-202, Transcript of coiled-coil domain containing 171, humanhuman

TSL 2

Gene CCDC171, Length 2,181 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC171-202ENST00000432954 ESX1Q8N693 406 aa12.23□□□□□ -0.45
CCDC171-202ENST00000432954 CCDC155Q8N6L0 562 aa12.23□□□□□ -0.45
CCDC171-202ENST00000432954 CFAP45Q9UL16 551 aa12.23□□□□□ -0.45
CCDC171-202ENST00000432954 CEP131Q9UPN4 1083 aa12.23□□□□□ -0.45
CCDC171-202ENST00000432954 MYPNQ86TC9 1320 aa12.23□□□□□ -0.45
CCDC171-202ENST00000432954 NDUFAB1O14561 156 aa12.23□□□□□ -0.45
CCDC171-202ENST00000432954 PRPF6O94906 941 aaKnown RBP12.23□□□□□ -0.45
CCDC171-202ENST00000432954 VIMP08670 466 aaKnown RBP12.23□□□□□ -0.45
CCDC171-202ENST00000432954 ERCC5P28715 1186 aaPredicted RBP12.23□□□□□ -0.45
CCDC171-202ENST00000432954 MLH1P40692 756 aa12.23□□□□□ -0.45
CCDC171-202ENST00000432954 PMS2P54278 862 aa12.23□□□□□ -0.45
CCDC171-202ENST00000432954 SH2D4BQ5SQS7 431 aa12.23□□□□□ -0.45
CCDC171-202ENST00000432954 CCBE1Q6UXH8 406 aaPredicted RBP12.23□□□□□ -0.45
CCDC171-202ENST00000432954 CCDC13Q8IYE1 715 aa12.23□□□□□ -0.45
CCDC171-202ENST00000432954 LRRC43Q8N309 656 aa12.23□□□□□ -0.45
CCDC171-202ENST00000432954 DCLK2Q8N568 766 aa12.23□□□□□ -0.45
CCDC171-202ENST00000432954 DEPTORQ8TB45 409 aa12.23□□□□□ -0.45
CCDC171-202ENST00000432954 CCHCR1Q8TD31 782 aa12.23□□□□□ -0.45
CCDC171-202ENST00000432954 APPBP2Q92624 585 aa12.23□□□□□ -0.45
CCDC171-202ENST00000432954 CNKSR1Q969H4 720 aa12.23□□□□□ -0.45
CCDC171-202ENST00000432954 ZNF653Q96CK0 615 aa12.23□□□□□ -0.45
CCDC171-202ENST00000432954 BHMT2Q9H2M3 363 aa12.23□□□□□ -0.45
CCDC171-202ENST00000432954 MAFFQ9ULX9 164 aa12.23□□□□□ -0.45
CCDC171-202ENST00000432954 L1RE1Q9UN81 338 aa12.23□□□□□ -0.45
CCDC171-202ENST00000432954 ZNF148Q9UQR1 794 aa12.23□□□□□ -0.45
CCDC171-202ENST00000432954 DAAM1Q9Y4D1 1078 aa12.23□□□□□ -0.45
CCDC171-202ENST00000432954 TOPBP1Q92547 1522 aa12.23□□□□□ -0.45
CCDC171-202ENST00000432954 FAM135AQ9P2D6 1515 aa12.23□□□□□ -0.45
CCDC171-202ENST00000432954 LRRC9Q6ZRR7 1453 aa12.23□□□□□ -0.45
CCDC171-202ENST00000432954 PARD3Q8TEW0 1356 aa12.23□□□□□ -0.45
CCDC171-202ENST00000432954 A6NNZ2 444 aa12.22□□□□□ -0.45
CCDC171-202ENST00000432954 RAPGEF3O95398 923 aa12.22□□□□□ -0.45
CCDC171-202ENST00000432954 IRAK1P51617 712 aa12.22□□□□□ -0.45
CCDC171-202ENST00000432954 TRIM29Q14134 588 aa12.22□□□□□ -0.45
CCDC171-202ENST00000432954 TUBB8Q3ZCM7 444 aa12.22□□□□□ -0.45
CCDC171-202ENST00000432954 BOLA3Q53S33 107 aa12.22□□□□□ -0.45
CCDC171-202ENST00000432954 TMEM53Q6P2H8 277 aa12.22□□□□□ -0.45
CCDC171-202ENST00000432954 LEO1Q8WVC0 666 aaPredicted RBP12.22□□□□□ -0.45
CCDC171-202ENST00000432954 TBC1D31Q96DN5 1066 aa12.22□□□□□ -0.45
CCDC171-202ENST00000432954 CENPHQ9H3R5 247 aa12.22□□□□□ -0.45
CCDC171-202ENST00000432954 AS3MTQ9HBK9 375 aa12.22□□□□□ -0.45
CCDC171-202ENST00000432954 HTR3EA5X5Y0 456 aa12.22□□□□□ -0.45
CCDC171-202ENST00000432954 LRRIQ3A6PVS8 624 aaPredicted RBP12.22□□□□□ -0.45
CCDC171-202ENST00000432954 CLASP2O75122 1294 aaKnown RBP12.22□□□□□ -0.45
CCDC171-202ENST00000432954 HSPA1AP0DMV8 641 aaKnown RBP12.22□□□□□ -0.45
CCDC171-202ENST00000432954 HSPA1BP0DMV9 641 aaKnown RBP12.22□□□□□ -0.45
CCDC171-202ENST00000432954 CCDC192P0DO97 292 aa12.22□□□□□ -0.45
CCDC171-202ENST00000432954 TXLNAP40222 546 aa12.22□□□□□ -0.45
CCDC171-202ENST00000432954 BPIFB4P59827 614 aa12.22□□□□□ -0.45
CCDC171-202ENST00000432954 CDK17Q00537 523 aa12.22□□□□□ -0.45
CCDC171-202ENST00000432954 WTAPQ15007 396 aa12.22□□□□□ -0.45
CCDC171-202ENST00000432954 ACCSLQ4AC99 568 aa12.22□□□□□ -0.45
CCDC171-202ENST00000432954 CFAP157Q5JU67 520 aa12.22□□□□□ -0.45
CCDC171-202ENST00000432954 C11orf74Q86VG3 221 aa12.22□□□□□ -0.45
CCDC171-202ENST00000432954 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP12.22□□□□□ -0.45
CCDC171-202ENST00000432954 SYT2Q8N9I0 419 aaPredicted RBP12.22□□□□□ -0.45
CCDC171-202ENST00000432954 WDR66Q8TBY9 1149 aa12.22□□□□□ -0.45
CCDC171-202ENST00000432954 ATP6V0A1Q93050 837 aa12.22□□□□□ -0.45
CCDC171-202ENST00000432954 VTI1AQ96AJ9 217 aa12.22□□□□□ -0.45
CCDC171-202ENST00000432954 PRAM1Q96QH2 718 aa12.22□□□□□ -0.45
CCDC171-202ENST00000432954 CDC5LQ99459 802 aaKnown RBP12.22□□□□□ -0.45
CCDC171-202ENST00000432954 PUS3Q9BZE2 481 aaKnown RBP12.22□□□□□ -0.45
CCDC171-202ENST00000432954 MUC3BQ9H195 1237 aa12.22□□□□□ -0.45
CCDC171-202ENST00000432954 VIPAS39Q9H9C1 493 aa12.22□□□□□ -0.45
CCDC171-202ENST00000432954 KLF15Q9UIH9 416 aa12.22□□□□□ -0.45
CCDC171-202ENST00000432954 RAB21Q9UL25 225 aa12.22□□□□□ -0.45
CCDC171-202ENST00000432954 ZNF652Q9Y2D9 606 aa12.22□□□□□ -0.45
CCDC171-202ENST00000432954 R3HDM2Q9Y2K5 976 aaKnown RBP12.22□□□□□ -0.45
CCDC171-202ENST00000432954 CDHR2Q9BYE9 1310 aa12.21□□□□□ -0.45
CCDC171-202ENST00000432954 SGTAO43765 313 aa12.21□□□□□ -0.45
CCDC171-202ENST00000432954 FUT4P22083 530 aa12.21□□□□□ -0.45
CCDC171-202ENST00000432954 CCT6AP40227 531 aaKnown RBP12.21□□□□□ -0.45
CCDC171-202ENST00000432954 PLOD1Q02809 727 aaPredicted RBP12.21□□□□□ -0.45
CCDC171-202ENST00000432954 GSTM4Q03013 218 aa12.21□□□□□ -0.45
CCDC171-202ENST00000432954 CCDC144BQ3MJ40 725 aa12.21□□□□□ -0.45
CCDC171-202ENST00000432954 RABL6Q3YEC7 729 aaPredicted RBP12.21□□□□□ -0.45
CCDC171-202ENST00000432954 CCDC144CPQ8IYA2 1237 aa12.21□□□□□ -0.45
CCDC171-202ENST00000432954 TRPC4APQ8TEL6 797 aa12.21□□□□□ -0.45
CCDC171-202ENST00000432954 SH3TC2Q8TF17 1288 aa12.21□□□□□ -0.45
CCDC171-202ENST00000432954 NEK1Q96PY6 1258 aa12.21□□□□□ -0.45
CCDC171-202ENST00000432954 CTAGE1Q96RT6 745 aa12.21□□□□□ -0.45
CCDC171-202ENST00000432954 CGREF1Q99674 301 aa12.21□□□□□ -0.45
CCDC171-202ENST00000432954 NUP58Q9BVL2 599 aa12.21□□□□□ -0.45
CCDC171-202ENST00000432954 CARD6Q9BX69 1037 aa12.21□□□□□ -0.45
CCDC171-202ENST00000432954 EIF2AQ9BY44 585 aaKnown RBP12.21□□□□□ -0.45
CCDC171-202ENST00000432954 CDKN2AIPQ9NXV6 580 aaPredicted RBP12.21□□□□□ -0.45
CCDC171-202ENST00000432954 MIS18AQ9NYP9 233 aa12.21□□□□□ -0.45
CCDC171-202ENST00000432954 C2CD2Q9Y426 696 aa12.21□□□□□ -0.45
CCDC171-202ENST00000432954 SAMD9Q5K651 1589 aa12.21□□□□□ -0.46
CCDC171-202ENST00000432954 EIF3HO15372 352 aaKnown RBP eCLIP12.2□□□□□ -0.46
CCDC171-202ENST00000432954 S100A5P33763 92 aa12.2□□□□□ -0.46
CCDC171-202ENST00000432954 ETF1P62495 437 aaKnown RBP12.2□□□□□ -0.46
CCDC171-202ENST00000432954 ITGA7Q13683 1181 aa12.2□□□□□ -0.46
CCDC171-202ENST00000432954 RASA2Q15283 850 aa12.2□□□□□ -0.46
CCDC171-202ENST00000432954 BCL2A1Q16548 175 aa12.2□□□□□ -0.46
CCDC171-202ENST00000432954 EXOC3L1Q86VI1 746 aa12.2□□□□□ -0.46
CCDC171-202ENST00000432954 SESTD1Q86VW0 696 aa12.2□□□□□ -0.46
CCDC171-202ENST00000432954 BCAS4Q8TDM0 211 aa12.2□□□□□ -0.46
CCDC171-202ENST00000432954 ANKRD27Q96NW4 1050 aa12.2□□□□□ -0.46
CCDC171-202ENST00000432954 RBM42Q9BTD8 480 aaKnown RBP12.2□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 13.2 ms