RNA–Protein interactions for RNA: ENST00000432588.5

ACTB-205, Transcript of actin beta, humanhuman

TSL 4

Gene ACTB, Length 568 nt, Biotype protein coding, Subcellular localisation Cell leading edge, Cytoplasm, Cytosol, Exosome, Lamellipodium, Mitochondria, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTB-205ENST00000432588 U2AF1L4Q8WU68 220 aaKnown RBP19.73■□□□□ 0.75
ACTB-205ENST00000432588 HTATIP2Q9BUP3 242 aa19.73■□□□□ 0.75
ACTB-205ENST00000432588 UNC93B1Q9H1C4 597 aa19.73■□□□□ 0.75
ACTB-205ENST00000432588 DNAJC18Q9H819 358 aa19.73■□□□□ 0.75
ACTB-205ENST00000432588 EXOC6BQ9Y2D4 811 aa19.73■□□□□ 0.75
ACTB-205ENST00000432588 USP5P45974 858 aa19.72■□□□□ 0.75
ACTB-205ENST00000432588 MAGEB6Q8N7X4 407 aa19.72■□□□□ 0.75
ACTB-205ENST00000432588 DPF3Q92784 378 aa19.72■□□□□ 0.75
ACTB-205ENST00000432588 USP17L10C9JJH3 530 aa19.71■□□□□ 0.75
ACTB-205ENST00000432588 H0YGN5 161 aa19.71■□□□□ 0.75
ACTB-205ENST00000432588 SGPL1O95470 568 aa19.71■□□□□ 0.75
ACTB-205ENST00000432588 MIGA1Q8NAN2 632 aa19.71■□□□□ 0.75
ACTB-205ENST00000432588 ZBTB21Q9ULJ3 1066 aa19.71■□□□□ 0.75
ACTB-205ENST00000432588 SIPA1L1O43166 1804 aa19.71■□□□□ 0.75
ACTB-205ENST00000432588 FOCADQ5VW36 1801 aa19.71■□□□□ 0.75
ACTB-205ENST00000432588 FARP2O94887 1054 aaPredicted RBP19.7■□□□□ 0.74
ACTB-205ENST00000432588 GDF11O95390 407 aa19.7■□□□□ 0.74
ACTB-205ENST00000432588 HOXA7P31268 230 aaPredicted RBP19.7■□□□□ 0.74
ACTB-205ENST00000432588 UBE2Q1Q7Z7E8 422 aa19.7■□□□□ 0.74
ACTB-205ENST00000432588 MORF4L1Q9UBU8 362 aa19.7■□□□□ 0.74
ACTB-205ENST00000432588 CDK5RAP2Q96SN8 1893 aa19.69■□□□□ 0.74
ACTB-205ENST00000432588 TFRCP02786 760 aaKnown RBP19.69■□□□□ 0.74
ACTB-205ENST00000432588 JAG1P78504 1218 aa19.69■□□□□ 0.74
ACTB-205ENST00000432588 TTF1Q15361 905 aaPredicted RBP19.69■□□□□ 0.74
ACTB-205ENST00000432588 ANTXR1Q9H6X2 564 aa19.69■□□□□ 0.74
ACTB-205ENST00000432588 COLQQ9Y215 455 aaPredicted RBP19.69■□□□□ 0.74
ACTB-205ENST00000432588 NDUFB9Q9Y6M9 179 aa19.69■□□□□ 0.74
ACTB-205ENST00000432588 MYO5AQ9Y4I1 1855 aaKnown RBP19.69■□□□□ 0.74
ACTB-205ENST00000432588 HMMRO75330 724 aa19.68■□□□□ 0.74
ACTB-205ENST00000432588 TTC6Q86TZ1 520 aa19.68■□□□□ 0.74
ACTB-205ENST00000432588 CLASRPQ8N2M8 674 aaKnown RBP19.68■□□□□ 0.74
ACTB-205ENST00000432588 RHPN1Q8TCX5 695 aa19.68■□□□□ 0.74
ACTB-205ENST00000432588 DEFB118Q96PH6 123 aa19.68■□□□□ 0.74
ACTB-205ENST00000432588 EHD4Q9H223 541 aa19.68■□□□□ 0.74
ACTB-205ENST00000432588 IL1RAPL2Q9NP60 686 aa19.68■□□□□ 0.74
ACTB-205ENST00000432588 PAK6Q9NQU5 681 aaPredicted RBP19.68■□□□□ 0.74
ACTB-205ENST00000432588 SERPINB13Q9UIV8 391 aa19.68■□□□□ 0.74
ACTB-205ENST00000432588 GH2P01242 217 aa19.67■□□□□ 0.74
ACTB-205ENST00000432588 HMGCRP04035 888 aa19.67■□□□□ 0.74
ACTB-205ENST00000432588 HERVK_113P62684 666 aa19.67■□□□□ 0.74
ACTB-205ENST00000432588 SHROOM1Q2M3G4 852 aaPredicted RBP19.67■□□□□ 0.74
ACTB-205ENST00000432588 RPAP2Q8IXW5 612 aaPredicted RBP19.67■□□□□ 0.74
ACTB-205ENST00000432588 GPRC5AQ8NFJ5 357 aa19.67■□□□□ 0.74
ACTB-205ENST00000432588 GTF3C2Q8WUA4 911 aaPredicted RBP19.67■□□□□ 0.74
ACTB-205ENST00000432588 KIF1BPQ96EK5 621 aa19.67■□□□□ 0.74
ACTB-205ENST00000432588 P2RX7Q99572 595 aaKnown RBP19.67■□□□□ 0.74
ACTB-205ENST00000432588 NR2E3Q9Y5X4 410 aa19.67■□□□□ 0.74
ACTB-205ENST00000432588 TATDN1Q6P1N9 297 aa19.66■□□□□ 0.74
ACTB-205ENST00000432588 USP17L2Q6R6M4 530 aa19.66■□□□□ 0.74
ACTB-205ENST00000432588 CCAR1Q8IX12 1150 aaKnown RBP19.66■□□□□ 0.74
ACTB-205ENST00000432588 CHMP4BQ9H444 224 aaKnown RBP19.66■□□□□ 0.74
ACTB-205ENST00000432588 GJD2Q9UKL4 321 aa19.66■□□□□ 0.74
ACTB-205ENST00000432588 DDX19BQ9UMR2 479 aa19.66■□□□□ 0.74
ACTB-205ENST00000432588 IFIT2P09913 472 aaKnown RBP19.65■□□□□ 0.74
ACTB-205ENST00000432588 FEZ1Q99689 392 aa19.65■□□□□ 0.74
ACTB-205ENST00000432588 XRN2Q9H0D6 950 aaKnown RBP eCLIP19.65■□□□□ 0.744e-14■■■□□ 15.2
ACTB-205ENST00000432588 MAGEB6P1A0A0J9YX57 407 aa19.64■□□□□ 0.73
ACTB-205ENST00000432588 APBB1O00213 710 aa19.64■□□□□ 0.73
ACTB-205ENST00000432588 MAPK4P31152 587 aa19.64■□□□□ 0.73
ACTB-205ENST00000432588 USP14P54578 494 aa19.64■□□□□ 0.73
ACTB-205ENST00000432588 PDE3AQ14432 1141 aa19.64■□□□□ 0.73
ACTB-205ENST00000432588 CERKLQ49MI3 558 aaPredicted RBP19.64■□□□□ 0.73
ACTB-205ENST00000432588 SLC9C2Q5TAH2 1124 aa19.64■□□□□ 0.73
ACTB-205ENST00000432588 PPIL4Q8WUA2 492 aaKnown RBP eCLIP19.64■□□□□ 0.73
ACTB-205ENST00000432588 SOCS4Q8WXH5 440 aa19.64■□□□□ 0.73
ACTB-205ENST00000432588 RIOK1Q9BRS2 568 aaKnown RBP19.64■□□□□ 0.73
ACTB-205ENST00000432588 CRNKL1Q9BZJ0 848 aaKnown RBP19.64■□□□□ 0.73
ACTB-205ENST00000432588 HMX1Q9NP08 348 aaPredicted RBP19.64■□□□□ 0.73
ACTB-205ENST00000432588 EMILIN3Q9NT22 766 aa19.64■□□□□ 0.73
ACTB-205ENST00000432588 DOCK3Q8IZD9 2030 aa19.63■□□□□ 0.73
ACTB-205ENST00000432588 MYH1P12882 1939 aa19.63■□□□□ 0.73
ACTB-205ENST00000432588 RPTORQ8N122 1335 aa19.63■□□□□ 0.73
ACTB-205ENST00000432588 POLR3DP05423 398 aaPredicted RBP19.63■□□□□ 0.73
ACTB-205ENST00000432588 FXR1P51114 621 aaKnown RBP eCLIP19.63■□□□□ 0.733e-14■■□□□ 12.3
ACTB-205ENST00000432588 RAB3GAP1Q15042 981 aa19.63■□□□□ 0.73
ACTB-205ENST00000432588 ABCB5Q2M3G0 1257 aa19.63■□□□□ 0.73
ACTB-205ENST00000432588 CHRDL2Q6WN34 429 aa19.63■□□□□ 0.73
ACTB-205ENST00000432588 DNAJC2Q99543 621 aaKnown RBP19.63■□□□□ 0.73
ACTB-205ENST00000432588 NUDT12Q9BQG2 462 aa19.63■□□□□ 0.73
ACTB-205ENST00000432588 CRISPLD2Q9H0B8 497 aa19.63■□□□□ 0.73
ACTB-205ENST00000432588 TXNRD2Q9NNW7 524 aa19.63■□□□□ 0.73
ACTB-205ENST00000432588 CABP5Q9NP86 173 aa19.63■□□□□ 0.73
ACTB-205ENST00000432588 COG6Q9Y2V7 657 aa19.63■□□□□ 0.73
ACTB-205ENST00000432588 RANBP2P49792 3224 aaKnown RBP19.63■□□□□ 0.73
ACTB-205ENST00000432588 RAB11FIP3O75154 756 aa19.62■□□□□ 0.73
ACTB-205ENST00000432588 XRCC5P13010 732 aaKnown RBP19.62■□□□□ 0.73
ACTB-205ENST00000432588 PDE6AP16499 860 aa19.62■□□□□ 0.73
ACTB-205ENST00000432588 ERVK-9P63128 1117 aa19.62■□□□□ 0.73
ACTB-205ENST00000432588 ERVK-24P63145 666 aa19.62■□□□□ 0.73
ACTB-205ENST00000432588 ZYXQ15942 572 aaKnown RBP19.62■□□□□ 0.73
ACTB-205ENST00000432588 C12orf42Q96LP6 360 aa19.62■□□□□ 0.73
ACTB-205ENST00000432588 PAGR1Q9BTK6 254 aa19.62■□□□□ 0.73
ACTB-205ENST00000432588 ZBTB40Q9NUA8 1239 aa19.62■□□□□ 0.73
ACTB-205ENST00000432588 RBPJLQ9UBG7 517 aa19.62■□□□□ 0.73
ACTB-205ENST00000432588 TRIOBPQ9H2D6 2365 aa19.61■□□□□ 0.73
ACTB-205ENST00000432588 USP17L15C9J2P7 530 aa19.61■□□□□ 0.73
ACTB-205ENST00000432588 USP17L13C9JLJ4 530 aa19.61■□□□□ 0.73
ACTB-205ENST00000432588 USP17L11C9JVI0 530 aa19.61■□□□□ 0.73
ACTB-205ENST00000432588 USP17L18D6R9N7 530 aa19.61■□□□□ 0.73
ACTB-205ENST00000432588 USP17L22D6RA61 530 aa19.61■□□□□ 0.73
Retrieved 100 of 20,778 RNA–protein pairs in 9.6 ms