RNA–Protein interactions for RNA: ENST00000431461.1

CDC40-204, Transcript of cell division cycle 40, humanhuman

TSL 3

Gene CDC40, Length 400 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC40-204ENST00000431461 STK35Q8TDR2 534 aa3.98□□□□□ -1.77
CDC40-204ENST00000431461 EPS8L3Q8TE67 593 aaKnown RBP3.98□□□□□ -1.77
CDC40-204ENST00000431461 HSPA12BQ96MM6 686 aa3.98□□□□□ -1.77
CDC40-204ENST00000431461 EMILIN2Q9BXX0 1053 aa3.98□□□□□ -1.77
CDC40-204ENST00000431461 FOXQ1Q9C009 403 aa3.98□□□□□ -1.77
CDC40-204ENST00000431461 NIF3L1Q9GZT8 377 aa3.98□□□□□ -1.77
CDC40-204ENST00000431461 PICK1Q9NRD5 415 aa3.98□□□□□ -1.77
CDC40-204ENST00000431461 SEMA3GQ9NS98 782 aa3.98□□□□□ -1.77
CDC40-204ENST00000431461 MAPK8IP1Q9UQF2 711 aa3.98□□□□□ -1.77
CDC40-204ENST00000431461 PRR33A8MZF0 331 aa3.97□□□□□ -1.77
CDC40-204ENST00000431461 FAM155AB1AL88 458 aaPredicted RBP3.97□□□□□ -1.77
CDC40-204ENST00000431461 H3BRB1 525 aa3.97□□□□□ -1.77
CDC40-204ENST00000431461 GPR182O15218 404 aa3.97□□□□□ -1.77
CDC40-204ENST00000431461 FANCGO15287 622 aa3.97□□□□□ -1.77
CDC40-204ENST00000431461 NME2P22392 152 aa3.97□□□□□ -1.77
CDC40-204ENST00000431461 NTF4P34130 210 aa3.97□□□□□ -1.77
CDC40-204ENST00000431461 FCGRTP55899 365 aa3.97□□□□□ -1.77
CDC40-204ENST00000431461 PPM1JQ5JR12 505 aa3.97□□□□□ -1.77
CDC40-204ENST00000431461 MAP1SQ66K74 1059 aaPredicted RBP3.97□□□□□ -1.77
CDC40-204ENST00000431461 GPBAR1Q8TDU6 330 aa3.97□□□□□ -1.77
CDC40-204ENST00000431461 ALKBH8Q96BT7 664 aaKnown RBP3.97□□□□□ -1.77
CDC40-204ENST00000431461 ALPK1Q96QP1 1244 aa3.97□□□□□ -1.77
CDC40-204ENST00000431461 TUT1Q9H6E5 874 aaKnown RBP3.97□□□□□ -1.77
CDC40-204ENST00000431461 SLAMF8Q9P0V8 285 aa3.97□□□□□ -1.77
CDC40-204ENST00000431461 DCDC2CA8MYV0 355 aa3.96□□□□□ -1.78
CDC40-204ENST00000431461 RFXAPO00287 272 aa3.96□□□□□ -1.78
CDC40-204ENST00000431461 SASH1O94885 1247 aa3.96□□□□□ -1.78
CDC40-204ENST00000431461 TRHRP34981 398 aaPredicted RBP3.96□□□□□ -1.78
CDC40-204ENST00000431461 SERPINB4P48594 390 aa3.96□□□□□ -1.78
CDC40-204ENST00000431461 HK2P52789 917 aa3.96□□□□□ -1.78
CDC40-204ENST00000431461 MPRIPQ6WCQ1 1025 aa3.96□□□□□ -1.78
CDC40-204ENST00000431461 THAP5Q7Z6K1 395 aa3.96□□□□□ -1.78
CDC40-204ENST00000431461 IRF2BP1Q8IU81 584 aa3.96□□□□□ -1.78
CDC40-204ENST00000431461 ACSBG1Q96GR2 724 aa3.96□□□□□ -1.78
CDC40-204ENST00000431461 CRELD1Q96HD1 420 aa3.96□□□□□ -1.78
CDC40-204ENST00000431461 DMRTB1Q96MA1 342 aa3.96□□□□□ -1.78
CDC40-204ENST00000431461 ARID3AQ99856 593 aa3.96□□□□□ -1.78
CDC40-204ENST00000431461 C1orf115Q9H7X2 142 aa3.96□□□□□ -1.78
CDC40-204ENST00000431461 PRDM5Q9NQX1 630 aaPredicted RBP3.96□□□□□ -1.78
CDC40-204ENST00000431461 NLRP2Q9NX02 1062 aa3.96□□□□□ -1.78
CDC40-204ENST00000431461 LRIG2O94898 1065 aa3.95□□□□□ -1.78
CDC40-204ENST00000431461 BMP6P22004 513 aa3.95□□□□□ -1.78
CDC40-204ENST00000431461 DLG4P78352 724 aa3.95□□□□□ -1.78
CDC40-204ENST00000431461 FGD1P98174 961 aa3.95□□□□□ -1.78
CDC40-204ENST00000431461 SPATS1Q496A3 300 aa3.95□□□□□ -1.78
CDC40-204ENST00000431461 KCT2Q8NC54 265 aa3.95□□□□□ -1.78
CDC40-204ENST00000431461 TMC1Q8TDI8 760 aa3.95□□□□□ -1.78
CDC40-204ENST00000431461 MYLIPQ8WY64 445 aa3.95□□□□□ -1.78
CDC40-204ENST00000431461 BCO2Q9BYV7 579 aa3.95□□□□□ -1.78
CDC40-204ENST00000431461 XYLT2Q9H1B5 865 aa3.95□□□□□ -1.78
CDC40-204ENST00000431461 CBX8Q9HC52 389 aa3.95□□□□□ -1.78
CDC40-204ENST00000431461 CNOT6Q9ULM6 557 aaKnown RBP3.95□□□□□ -1.78
CDC40-204ENST00000431461 TPX2Q9ULW0 747 aaKnown RBP3.95□□□□□ -1.78
CDC40-204ENST00000431461 DNAJC25-GNG10A0A024R161 153 aa3.94□□□□□ -1.78
CDC40-204ENST00000431461 TRIM37O94972 964 aa3.94□□□□□ -1.78
CDC40-204ENST00000431461 HPXP02790 462 aa3.94□□□□□ -1.78
CDC40-204ENST00000431461 RALGPS1Q5JS13 557 aa3.94□□□□□ -1.78
CDC40-204ENST00000431461 ZBTB37Q5TC79 503 aa3.94□□□□□ -1.78
CDC40-204ENST00000431461 SCARA3Q6AZY7 606 aa3.94□□□□□ -1.78
CDC40-204ENST00000431461 CDC37L1Q7L3B6 337 aa3.94□□□□□ -1.78
CDC40-204ENST00000431461 TTC6Q86TZ1 520 aa3.94□□□□□ -1.78
CDC40-204ENST00000431461 C12orf40Q86WS4 652 aa3.94□□□□□ -1.78
CDC40-204ENST00000431461 GRIN3AQ8TCU5 1115 aa3.94□□□□□ -1.78
CDC40-204ENST00000431461 NECAB3Q96P71 396 aaPredicted RBP3.94□□□□□ -1.78
CDC40-204ENST00000431461 RBCK1Q9BYM8 510 aa3.94□□□□□ -1.78
CDC40-204ENST00000431461 ZSWIM5Q9P217 1185 aa3.94□□□□□ -1.78
CDC40-204ENST00000431461 AKAP2Q9Y2D5 859 aa3.94□□□□□ -1.78
CDC40-204ENST00000431461 MYRFQ9Y2G1 1151 aa3.94□□□□□ -1.78
CDC40-204ENST00000431461 TEX51A0A1B0GUA7 166 aa3.93□□□□□ -1.78
CDC40-204ENST00000431461 TRIM13O60858 407 aa3.93□□□□□ -1.78
CDC40-204ENST00000431461 CBX7O95931 251 aa3.93□□□□□ -1.78
CDC40-204ENST00000431461 PDIA4P13667 645 aaKnown RBP3.93□□□□□ -1.78
CDC40-204ENST00000431461 PI16Q6UXB8 463 aa3.93□□□□□ -1.78
CDC40-204ENST00000431461 ZNF605Q86T29 641 aa3.93□□□□□ -1.78
CDC40-204ENST00000431461 LILRA2Q8N149 483 aa3.93□□□□□ -1.78
CDC40-204ENST00000431461 MFSD4AQ8N468 514 aa3.93□□□□□ -1.78
CDC40-204ENST00000431461 ZNF507Q8TCN5 953 aa3.93□□□□□ -1.78
CDC40-204ENST00000431461 UBE2FQ969M7 185 aa3.93□□□□□ -1.78
CDC40-204ENST00000431461 COX4I2Q96KJ9 171 aa3.93□□□□□ -1.78
CDC40-204ENST00000431461 MCOLN1Q9GZU1 580 aa3.93□□□□□ -1.78
CDC40-204ENST00000431461 SLC6A17Q9H1V8 727 aa3.93□□□□□ -1.78
CDC40-204ENST00000431461 CNOT11Q9UKZ1 510 aaKnown RBP3.93□□□□□ -1.78
CDC40-204ENST00000431461 SAMM50Q9Y512 469 aa3.93□□□□□ -1.78
CDC40-204ENST00000431461 ADAMTS20P59510 1910 aa3.93□□□□□ -1.78
CDC40-204ENST00000431461 SLITRK5O94991 958 aa3.92□□□□□ -1.78
CDC40-204ENST00000431461 EFEMP1Q12805 493 aa3.92□□□□□ -1.78
CDC40-204ENST00000431461 LRRC14Q15048 493 aa3.92□□□□□ -1.78
CDC40-204ENST00000431461 NXPE4Q6UWF7 544 aa3.92□□□□□ -1.78
CDC40-204ENST00000431461 ARMCX6Q7L4S7 300 aa3.92□□□□□ -1.78
CDC40-204ENST00000431461 TXNDC2Q86VQ3 553 aa3.92□□□□□ -1.78
CDC40-204ENST00000431461 C3orf58Q8NDZ4 430 aa3.92□□□□□ -1.78
CDC40-204ENST00000431461 MIPEPQ99797 713 aa3.92□□□□□ -1.78
CDC40-204ENST00000431461 SGPP1Q9BX95 441 aa3.92□□□□□ -1.78
CDC40-204ENST00000431461 RNF32Q9H0A6 362 aa3.92□□□□□ -1.78
CDC40-204ENST00000431461 C19orf44Q9H6X5 657 aa3.92□□□□□ -1.78
CDC40-204ENST00000431461 TMEM59LQ9UK28 342 aa3.92□□□□□ -1.78
CDC40-204ENST00000431461 ST14Q9Y5Y6 855 aa3.92□□□□□ -1.78
CDC40-204ENST00000431461 WASH4PA8MWX3 477 aa3.91□□□□□ -1.78
CDC40-204ENST00000431461 ENC1O14682 589 aa3.91□□□□□ -1.78
CDC40-204ENST00000431461 CAP2P40123 477 aa3.91□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms