RNA–Protein interactions for RNA: ENST00000431146.6

USHBP1-203, Transcript of USH1 protein network component harmonin binding protein 1, humanhuman

TSL 2 BASIC

Gene USHBP1, Length 2,136 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USHBP1-203ENST00000431146 SF3B2Q13435 895 aaKnown RBP19.36■□□□□ 0.69
USHBP1-203ENST00000431146 CAMK4Q16566 473 aa19.36■□□□□ 0.69
USHBP1-203ENST00000431146 AMOTL1Q8IY63 956 aa19.36■□□□□ 0.69
USHBP1-203ENST00000431146 TSPY26PQ9H489 355 aa19.36■□□□□ 0.69
USHBP1-203ENST00000431146 MKNK2Q9HBH9 465 aa19.36■□□□□ 0.69
USHBP1-203ENST00000431146 DACT1Q9NYF0 836 aa19.36■□□□□ 0.69
USHBP1-203ENST00000431146 TTF2Q9UNY4 1162 aaKnown RBP19.36■□□□□ 0.69
USHBP1-203ENST00000431146 FLT1P17948 1338 aa19.36■□□□□ 0.69
USHBP1-203ENST00000431146 CCDC196A0A1B0GTZ2 297 aa19.36■□□□□ 0.69
USHBP1-203ENST00000431146 PLEKHA8P1O95397 391 aa19.36■□□□□ 0.69
USHBP1-203ENST00000431146 TROAPQ12815 778 aa19.36■□□□□ 0.69
USHBP1-203ENST00000431146 MYSM1Q5VVJ2 828 aa19.36■□□□□ 0.69
USHBP1-203ENST00000431146 SLF2Q8IX21 1173 aa19.36■□□□□ 0.69
USHBP1-203ENST00000431146 TRIM22Q8IYM9 498 aa19.36■□□□□ 0.69
USHBP1-203ENST00000431146 FAM163AQ96GL9 167 aaPredicted RBP19.36■□□□□ 0.69
USHBP1-203ENST00000431146 QSER1Q2KHR3 1735 aa19.35■□□□□ 0.69
USHBP1-203ENST00000431146 NR1I2O75469 434 aa19.35■□□□□ 0.69
USHBP1-203ENST00000431146 BAG6P46379 1132 aa19.35■□□□□ 0.69
USHBP1-203ENST00000431146 TRIM29Q14134 588 aa19.35■□□□□ 0.69
USHBP1-203ENST00000431146 BRAPQ7Z569 592 aa19.35■□□□□ 0.69
USHBP1-203ENST00000431146 FBXO41Q8TF61 875 aa19.35■□□□□ 0.69
USHBP1-203ENST00000431146 EYA3Q99504 573 aa19.35■□□□□ 0.69
USHBP1-203ENST00000431146 KCNJ14Q9UNX9 436 aa19.35■□□□□ 0.69
USHBP1-203ENST00000431146 RCAN1P53805 252 aa19.34■□□□□ 0.69
USHBP1-203ENST00000431146 GNL2Q13823 731 aaKnown RBP19.34■□□□□ 0.69
USHBP1-203ENST00000431146 IL17RBQ9NRM6 502 aa19.34■□□□□ 0.69
USHBP1-203ENST00000431146 DDX60LQ5H9U9 1706 aaKnown RBP19.34■□□□□ 0.69
USHBP1-203ENST00000431146 SCN9AQ15858 1988 aa19.34■□□□□ 0.69
USHBP1-203ENST00000431146 ROBO3Q96MS0 1386 aa19.34■□□□□ 0.69
USHBP1-203ENST00000431146 USP17L3A6NCW0 530 aa19.34■□□□□ 0.69
USHBP1-203ENST00000431146 USP17L4A6NCW7 530 aa19.34■□□□□ 0.69
USHBP1-203ENST00000431146 PICALMQ13492 652 aa19.34■□□□□ 0.69
USHBP1-203ENST00000431146 RCSD1Q6JBY9 416 aa19.34■□□□□ 0.69
USHBP1-203ENST00000431146 USP17L1Q7RTZ2 530 aa19.34■□□□□ 0.69
USHBP1-203ENST00000431146 PLCG2P16885 1265 aa19.33■□□□□ 0.69
USHBP1-203ENST00000431146 ME1P48163 572 aa19.33■□□□□ 0.69
USHBP1-203ENST00000431146 ATL3Q6DD88 541 aa19.33■□□□□ 0.69
USHBP1-203ENST00000431146 FOCADQ5VW36 1801 aa19.33■□□□□ 0.68
USHBP1-203ENST00000431146 CERS3Q8IU89 383 aa19.33■□□□□ 0.68
USHBP1-203ENST00000431146 RTEL1Q9NZ71 1219 aa19.33■□□□□ 0.68
USHBP1-203ENST00000431146 DEXIO95424 95 aa19.32■□□□□ 0.68
USHBP1-203ENST00000431146 TSPY3P0CV98 308 aa19.32■□□□□ 0.68
USHBP1-203ENST00000431146 TSPY8P0CW00 308 aa19.32■□□□□ 0.68
USHBP1-203ENST00000431146 WASF1Q92558 559 aa19.32■□□□□ 0.68
USHBP1-203ENST00000431146 CNKSR1Q969H4 720 aa19.32■□□□□ 0.68
USHBP1-203ENST00000431146 NUP62CLQ9H1M0 184 aa19.32■□□□□ 0.68
USHBP1-203ENST00000431146 GOLPH3LQ9H4A5 285 aa19.32■□□□□ 0.68
USHBP1-203ENST00000431146 DDAH1O94760 285 aa19.31■□□□□ 0.68
USHBP1-203ENST00000431146 LETM1O95202 739 aaPredicted RBP19.31■□□□□ 0.68
USHBP1-203ENST00000431146 RASA1P20936 1047 aa19.31■□□□□ 0.68
USHBP1-203ENST00000431146 FUT2Q10981 343 aa19.31■□□□□ 0.68
USHBP1-203ENST00000431146 STK38Q15208 465 aa19.31■□□□□ 0.68
USHBP1-203ENST00000431146 AOC3Q16853 763 aa19.31■□□□□ 0.68
USHBP1-203ENST00000431146 CCAR1Q8IX12 1150 aaKnown RBP19.31■□□□□ 0.68
USHBP1-203ENST00000431146 ZNF444Q8N0Y2 327 aaPredicted RBP19.31■□□□□ 0.68
USHBP1-203ENST00000431146 LINC00301Q8NCQ3 95 aa19.31■□□□□ 0.68
USHBP1-203ENST00000431146 ECE2O60344 883 aa19.31■□□□□ 0.68
USHBP1-203ENST00000431146 CDK8P49336 464 aa19.31■□□□□ 0.68
USHBP1-203ENST00000431146 C7orf43Q8WVR3 580 aa19.31■□□□□ 0.68
USHBP1-203ENST00000431146 PCDHA7Q9UN72 937 aa19.31■□□□□ 0.68
USHBP1-203ENST00000431146 MTMR7Q9Y216 660 aa19.31■□□□□ 0.68
USHBP1-203ENST00000431146 V9GY48 417 aaPredicted RBP19.31■□□□□ 0.68
USHBP1-203ENST00000431146 BTBD18B2RXH4 712 aa19.3■□□□□ 0.68
USHBP1-203ENST00000431146 C21orf2O43822 256 aa19.3■□□□□ 0.68
USHBP1-203ENST00000431146 MMP1P03956 469 aa19.3■□□□□ 0.68
USHBP1-203ENST00000431146 CALM1P0DP23 149 aa19.3■□□□□ 0.68
USHBP1-203ENST00000431146 CALM2P0DP24 149 aa19.3■□□□□ 0.68
USHBP1-203ENST00000431146 CALM3P0DP25 149 aa19.3■□□□□ 0.68
USHBP1-203ENST00000431146 PODNQ7Z5L7 613 aa19.3■□□□□ 0.68
USHBP1-203ENST00000431146 CKAP2LQ8IYA6 745 aa19.3■□□□□ 0.68
USHBP1-203ENST00000431146 PIBF1Q8WXW3 757 aa19.3■□□□□ 0.68
USHBP1-203ENST00000431146 SHISA4Q96DD7 197 aa19.3■□□□□ 0.68
USHBP1-203ENST00000431146 GNL3Q9BVP2 549 aaKnown RBP eCLIP19.3■□□□□ 0.68
USHBP1-203ENST00000431146 DDX4Q9NQI0 724 aaKnown RBP19.3■□□□□ 0.68
USHBP1-203ENST00000431146 POLR3EQ9NVU0 708 aa19.3■□□□□ 0.68
USHBP1-203ENST00000431146 SUGT1Q9Y2Z0 365 aa19.3■□□□□ 0.68
USHBP1-203ENST00000431146 PCDHAC2Q9Y5I4 1007 aa19.3■□□□□ 0.68
USHBP1-203ENST00000431146 U2AF2P26368 475 aaKnown RBP eCLIP19.3■□□□□ 0.68
USHBP1-203ENST00000431146 AKAP17AQ02040 695 aaKnown RBP19.3■□□□□ 0.68
USHBP1-203ENST00000431146 PPP2R5BQ15173 497 aa19.3■□□□□ 0.68
USHBP1-203ENST00000431146 PKN1Q16512 942 aa19.3■□□□□ 0.68
USHBP1-203ENST00000431146 ANO1Q5XXA6 986 aa19.3■□□□□ 0.68
USHBP1-203ENST00000431146 C16orf86Q6ZW13 317 aa19.3■□□□□ 0.68
USHBP1-203ENST00000431146 TMTC3Q6ZXV5 915 aa19.3■□□□□ 0.68
USHBP1-203ENST00000431146 KIAA0825Q8IV33 1275 aa19.3■□□□□ 0.68
USHBP1-203ENST00000431146 SRBD1Q8N5C6 995 aaKnown RBP19.3■□□□□ 0.68
USHBP1-203ENST00000431146 CTCFLQ8NI51 663 aaPredicted RBP19.3■□□□□ 0.68
USHBP1-203ENST00000431146 RNF26Q9BY78 433 aaPredicted RBP19.3■□□□□ 0.68
USHBP1-203ENST00000431146 KAT14Q9H8E8 782 aa19.3■□□□□ 0.68
USHBP1-203ENST00000431146 RBM28Q9NW13 759 aaKnown RBP19.3■□□□□ 0.68
USHBP1-203ENST00000431146 SF3A1Q15459 793 aaKnown RBP19.29■□□□□ 0.68
USHBP1-203ENST00000431146 DIS3L2Q8IYB7 885 aaKnown RBP19.29■□□□□ 0.68
USHBP1-203ENST00000431146 TNMDQ9H2S6 317 aa19.29■□□□□ 0.68
USHBP1-203ENST00000431146 USP40Q9NVE5 1235 aa19.29■□□□□ 0.68
USHBP1-203ENST00000431146 VPS54Q9P1Q0 977 aa19.29■□□□□ 0.68
USHBP1-203ENST00000431146 SNED1Q8TER0 1413 aa19.29■□□□□ 0.68
USHBP1-203ENST00000431146 WDHD1O75717 1129 aaPredicted RBP19.28■□□□□ 0.68
USHBP1-203ENST00000431146 NR5A1Q13285 461 aa19.28■□□□□ 0.68
USHBP1-203ENST00000431146 PNMA1Q8ND90 353 aa19.28■□□□□ 0.68
USHBP1-203ENST00000431146 RGS22Q8NE09 1264 aa19.28■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms