RNA–Protein interactions for RNA: ENST00000431127.1

CTDSP1-203, Transcript of CTD small phosphatase 1, humanhuman

TSL 3

Gene CTDSP1, Length 586 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSP1-203ENST00000431127 SIPA1L1O43166 1804 aa20.83■□□□□ 0.92
CTDSP1-203ENST00000431127 GSG1L2A8MUP6 293 aa20.82■□□□□ 0.92
CTDSP1-203ENST00000431127 PATL2C9JE40 543 aaKnown RBP20.82■□□□□ 0.92
CTDSP1-203ENST00000431127 BTBD19C9JJ37 291 aa20.82■□□□□ 0.92
CTDSP1-203ENST00000431127 CERKLQ49MI3 558 aaPredicted RBP20.82■□□□□ 0.92
CTDSP1-203ENST00000431127 C12orf60Q5U649 245 aa20.82■□□□□ 0.92
CTDSP1-203ENST00000431127 ZNF280CQ8ND82 737 aa20.82■□□□□ 0.92
CTDSP1-203ENST00000431127 NACAP1Q9BZK3 213 aa20.82■□□□□ 0.92
CTDSP1-203ENST00000431127 HELLSQ9NRZ9 838 aa20.82■□□□□ 0.92
CTDSP1-203ENST00000431127 NAV1Q8NEY1 1877 aa20.81■□□□□ 0.92
CTDSP1-203ENST00000431127 DDX60LQ5H9U9 1706 aaKnown RBP20.81■□□□□ 0.92
CTDSP1-203ENST00000431127 A0A0G2JLL6 359 aaPredicted RBP20.81■□□□□ 0.92
CTDSP1-203ENST00000431127 TRIM75PA6NK02 468 aa20.81■□□□□ 0.92
CTDSP1-203ENST00000431127 GDF11O95390 407 aa20.81■□□□□ 0.92
CTDSP1-203ENST00000431127 APPP05067 770 aa20.81■□□□□ 0.92
CTDSP1-203ENST00000431127 MLLT1Q03111 559 aaPredicted RBP20.81■□□□□ 0.92
CTDSP1-203ENST00000431127 CTR9Q6PD62 1173 aa20.81■□□□□ 0.92
CTDSP1-203ENST00000431127 PRRT2Q7Z6L0 340 aaPredicted RBP20.81■□□□□ 0.92
CTDSP1-203ENST00000431127 ANKRD23Q86SG2 305 aa20.81■□□□□ 0.92
CTDSP1-203ENST00000431127 FAM43AQ8N2R8 423 aa20.81■□□□□ 0.92
CTDSP1-203ENST00000431127 WDR18Q9BV38 432 aa20.81■□□□□ 0.92
CTDSP1-203ENST00000431127 ZBTB21Q9ULJ3 1066 aa20.81■□□□□ 0.92
CTDSP1-203ENST00000431127 GPR25O00155 361 aa20.8■□□□□ 0.92
CTDSP1-203ENST00000431127 CYP2D6P10635 497 aa20.8■□□□□ 0.92
CTDSP1-203ENST00000431127 PDE4AP27815 886 aa20.8■□□□□ 0.92
CTDSP1-203ENST00000431127 SHMT1P34896 483 aa20.8■□□□□ 0.92
CTDSP1-203ENST00000431127 SPP2Q13103 211 aa20.8■□□□□ 0.92
CTDSP1-203ENST00000431127 TAF1CQ15572 869 aaPredicted RBP20.8■□□□□ 0.92
CTDSP1-203ENST00000431127 SBK1Q52WX2 424 aa20.8■□□□□ 0.92
CTDSP1-203ENST00000431127 CENPQQ7L2Z9 268 aaPredicted RBP20.8■□□□□ 0.92
CTDSP1-203ENST00000431127 SEC62Q99442 399 aaKnown RBP20.8■□□□□ 0.92
CTDSP1-203ENST00000431127 ZFYVE28Q9HCC9 887 aa20.8■□□□□ 0.92
CTDSP1-203ENST00000431127 CABP5Q9NP86 173 aa20.8■□□□□ 0.92
CTDSP1-203ENST00000431127 FRMD4AQ9P2Q2 1039 aaPredicted RBP20.8■□□□□ 0.92
CTDSP1-203ENST00000431127 GH2P01242 217 aa20.79■□□□□ 0.92
CTDSP1-203ENST00000431127 TDO2P48775 406 aa20.79■□□□□ 0.92
CTDSP1-203ENST00000431127 CRHR2Q13324 411 aa20.79■□□□□ 0.92
CTDSP1-203ENST00000431127 MOGSQ13724 837 aa20.79■□□□□ 0.92
CTDSP1-203ENST00000431127 ABCB5Q2M3G0 1257 aa20.79■□□□□ 0.92
CTDSP1-203ENST00000431127 CCDC84Q86UT8 332 aaPredicted RBP20.79■□□□□ 0.92
CTDSP1-203ENST00000431127 HIP1O00291 1037 aa20.78■□□□□ 0.92
CTDSP1-203ENST00000431127 JAG1P78504 1218 aa20.78■□□□□ 0.92
CTDSP1-203ENST00000431127 MCMDC2Q4G0Z9 681 aa20.78■□□□□ 0.92
CTDSP1-203ENST00000431127 C16orf86Q6ZW13 317 aa20.78■□□□□ 0.92
CTDSP1-203ENST00000431127 IFNL3Q8IZI9 196 aa20.78■□□□□ 0.92
CTDSP1-203ENST00000431127 PDHXO00330 501 aa20.77■□□□□ 0.92
CTDSP1-203ENST00000431127 FKTNO75072 461 aa20.77■□□□□ 0.92
CTDSP1-203ENST00000431127 SDSP20132 328 aa20.77■□□□□ 0.92
CTDSP1-203ENST00000431127 TTC22Q5TAA0 569 aa20.77■□□□□ 0.92
CTDSP1-203ENST00000431127 GADL1Q6ZQY3 521 aa20.77■□□□□ 0.92
CTDSP1-203ENST00000431127 PROCA1Q8NCQ7 364 aaPredicted RBP20.77■□□□□ 0.92
CTDSP1-203ENST00000431127 ZNF296Q8WUU4 475 aaPredicted RBP20.77■□□□□ 0.92
CTDSP1-203ENST00000431127 DYNLL2Q96FJ2 89 aa20.77■□□□□ 0.92
CTDSP1-203ENST00000431127 CCDC17Q96LX7 622 aa20.77■□□□□ 0.92
CTDSP1-203ENST00000431127 FAM227BQ96M60 508 aa20.77■□□□□ 0.92
CTDSP1-203ENST00000431127 R3HDMLQ9H3Y0 253 aa20.77■□□□□ 0.92
CTDSP1-203ENST00000431127 EPB41L4AQ9HCS5 686 aaPredicted RBP20.77■□□□□ 0.92
CTDSP1-203ENST00000431127 SLC45A1Q9Y2W3 748 aa20.77■□□□□ 0.92
CTDSP1-203ENST00000431127 CYP2D7A0A087X1C5 515 aa20.76■□□□□ 0.91
CTDSP1-203ENST00000431127 C19orf81C9J6K1 198 aa20.76■□□□□ 0.91
CTDSP1-203ENST00000431127 CDK8P49336 464 aa20.76■□□□□ 0.91
CTDSP1-203ENST00000431127 MFAP1P55081 439 aaKnown RBP20.76■□□□□ 0.91
CTDSP1-203ENST00000431127 BACE1P56817 501 aa20.76■□□□□ 0.91
CTDSP1-203ENST00000431127 EVX2Q03828 476 aa20.76■□□□□ 0.91
CTDSP1-203ENST00000431127 SH3D19Q5HYK7 790 aa20.76■□□□□ 0.91
CTDSP1-203ENST00000431127 GPAT2Q6NUI2 795 aa20.76■□□□□ 0.91
CTDSP1-203ENST00000431127 CTU1Q7Z7A3 348 aaKnown RBP20.76■□□□□ 0.91
CTDSP1-203ENST00000431127 NAPBQ9H115 298 aa20.76■□□□□ 0.91
CTDSP1-203ENST00000431127 ZNF287Q9HBT7 754 aa20.76■□□□□ 0.91
CTDSP1-203ENST00000431127 MINDY4BA8MYZ0 360 aa20.75■□□□□ 0.91
CTDSP1-203ENST00000431127 USP17L10C9JJH3 530 aa20.75■□□□□ 0.91
CTDSP1-203ENST00000431127 MPHOSPH10O00566 681 aaKnown RBP20.75■□□□□ 0.91
CTDSP1-203ENST00000431127 TLR2O60603 784 aa20.75■□□□□ 0.91
CTDSP1-203ENST00000431127 NMIQ13287 307 aaPredicted RBP20.75■□□□□ 0.91
CTDSP1-203ENST00000431127 RAB3GAP1Q15042 981 aa20.75■□□□□ 0.91
CTDSP1-203ENST00000431127 SHROOM1Q2M3G4 852 aaPredicted RBP20.75■□□□□ 0.91
CTDSP1-203ENST00000431127 SLC44A5Q8NCS7 719 aa20.75■□□□□ 0.91
CTDSP1-203ENST00000431127 PARK7Q99497 189 aaKnown RBP20.75■□□□□ 0.91
CTDSP1-203ENST00000431127 DIAPH3Q9NSV4 1193 aa20.75■□□□□ 0.91
CTDSP1-203ENST00000431127 AGTPBP1Q9UPW5 1226 aa20.75■□□□□ 0.91
CTDSP1-203ENST00000431127 BAZ2AQ9UIF9 1905 aaKnown RBP20.74■□□□□ 0.91
CTDSP1-203ENST00000431127 PHIPQ8WWQ0 1821 aa20.74■□□□□ 0.91
CTDSP1-203ENST00000431127 ATAD5Q96QE3 1844 aa20.74■□□□□ 0.91
CTDSP1-203ENST00000431127 A0A0D9SFI3 127 aa20.74■□□□□ 0.91
CTDSP1-203ENST00000431127 HMGCS2P54868 508 aa20.74■□□□□ 0.91
CTDSP1-203ENST00000431127 MTMR2Q13614 643 aa20.74■□□□□ 0.91
CTDSP1-203ENST00000431127 CCDC129Q6ZRS4 1044 aa20.74■□□□□ 0.91
CTDSP1-203ENST00000431127 TMEM179Q6ZVK1 233 aa20.74■□□□□ 0.91
CTDSP1-203ENST00000431127 CCDC136Q96JN2 1154 aa20.74■□□□□ 0.91
CTDSP1-203ENST00000431127 TMOD4Q9NZQ9 345 aa20.74■□□□□ 0.91
CTDSP1-203ENST00000431127 ROBO3Q96MS0 1386 aa20.73■□□□□ 0.91
CTDSP1-203ENST00000431127 SLC3A2P08195 630 aaKnown RBP20.73■□□□□ 0.91
CTDSP1-203ENST00000431127 PABPC4Q13310 644 aaKnown RBP eCLIP20.73■□□□□ 0.91
CTDSP1-203ENST00000431127 GSPT1P15170 499 aaKnown RBP20.72■□□□□ 0.91
CTDSP1-203ENST00000431127 SP3Q02447 781 aa20.72■□□□□ 0.91
CTDSP1-203ENST00000431127 SEPT2Q15019 361 aa20.72■□□□□ 0.91
CTDSP1-203ENST00000431127 ALX1Q15699 326 aa20.72■□□□□ 0.91
CTDSP1-203ENST00000431127 ERO1AQ96HE7 468 aa20.72■□□□□ 0.91
CTDSP1-203ENST00000431127 FEZ1Q99689 392 aa20.72■□□□□ 0.91
CTDSP1-203ENST00000431127 MKNK2Q9HBH9 465 aa20.72■□□□□ 0.91
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms