RNA–Protein interactions for RNA: ENST00000430454.5

HDAC9-211, Transcript of histone deacetylase 9, humanhuman

TSL 4

Gene HDAC9, Length 545 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC9-211ENST00000430454 CERKLQ49MI3 558 aaPredicted RBP11.02□□□□□ -0.65
HDAC9-211ENST00000430454 USP17L2Q6R6M4 530 aa11.02□□□□□ -0.65
HDAC9-211ENST00000430454 CCAR1Q8IX12 1150 aaKnown RBP11.02□□□□□ -0.65
HDAC9-211ENST00000430454 SLAIN1Q8ND83 568 aa11.02□□□□□ -0.65
HDAC9-211ENST00000430454 FEZ1Q99689 392 aa11.02□□□□□ -0.65
HDAC9-211ENST00000430454 HAUS7Q99871 368 aa11.02□□□□□ -0.65
HDAC9-211ENST00000430454 ANTXR1Q9H6X2 564 aa11.02□□□□□ -0.65
HDAC9-211ENST00000430454 ZBTB21Q9ULJ3 1066 aa11.02□□□□□ -0.65
HDAC9-211ENST00000430454 ZNF532Q9HCE3 1301 aa11.02□□□□□ -0.65
HDAC9-211ENST00000430454 MTMR2Q13614 643 aa11.01□□□□□ -0.65
HDAC9-211ENST00000430454 ABCB5Q2M3G0 1257 aa11.01□□□□□ -0.65
HDAC9-211ENST00000430454 PRPF38BQ5VTL8 546 aaKnown RBP11.01□□□□□ -0.65
HDAC9-211ENST00000430454 TATDN1Q6P1N9 297 aa11.01□□□□□ -0.65
HDAC9-211ENST00000430454 ARHGAP39Q9C0H5 1083 aa11.01□□□□□ -0.65
HDAC9-211ENST00000430454 BOLA2Q9H3K6 86 aa11.01□□□□□ -0.65
HDAC9-211ENST00000430454 ATP8A2Q9NTI2 1148 aa11.01□□□□□ -0.65
HDAC9-211ENST00000430454 ECHDC1Q9NTX5 307 aa11.01□□□□□ -0.65
HDAC9-211ENST00000430454 MCM9Q9NXL9 1143 aa11.01□□□□□ -0.65
HDAC9-211ENST00000430454 SWAP70Q9UH65 585 aa11.01□□□□□ -0.65
HDAC9-211ENST00000430454 NDUFB9Q9Y6M9 179 aa11.01□□□□□ -0.65
HDAC9-211ENST00000430454 GDF11O95390 407 aa11□□□□□ -0.65
HDAC9-211ENST00000430454 HOXA7P31268 230 aaPredicted RBP11□□□□□ -0.65
HDAC9-211ENST00000430454 UBE3CQ15386 1083 aa11□□□□□ -0.65
HDAC9-211ENST00000430454 TREML2Q5T2D2 321 aa11□□□□□ -0.65
HDAC9-211ENST00000430454 ANKRD13CQ8N6S4 541 aa11□□□□□ -0.65
HDAC9-211ENST00000430454 PXYLP1Q8TE99 480 aa11□□□□□ -0.65
HDAC9-211ENST00000430454 SH3TC2Q8TF17 1288 aa11□□□□□ -0.65
HDAC9-211ENST00000430454 RIOK1Q9BRS2 568 aaKnown RBP11□□□□□ -0.65
HDAC9-211ENST00000430454 ASCC2Q9H1I8 757 aaPredicted RBP11□□□□□ -0.65
HDAC9-211ENST00000430454 DCTPP1Q9H773 170 aa11□□□□□ -0.65
HDAC9-211ENST00000430454 CWC22Q9HCG8 908 aaKnown RBP11□□□□□ -0.65
HDAC9-211ENST00000430454 TNRC18O15417 2968 aaPredicted RBP11□□□□□ -0.65
HDAC9-211ENST00000430454 ERC2O15083 957 aa10.99□□□□□ -0.65
HDAC9-211ENST00000430454 GLRX3O76003 335 aaKnown RBP10.99□□□□□ -0.65
HDAC9-211ENST00000430454 ECM2O94769 699 aaPredicted RBP10.99□□□□□ -0.65
HDAC9-211ENST00000430454 GH2P01242 217 aa10.99□□□□□ -0.65
HDAC9-211ENST00000430454 ZFYP08048 801 aaPredicted RBP10.99□□□□□ -0.65
HDAC9-211ENST00000430454 SLURP2P0DP57 97 aa10.99□□□□□ -0.65
HDAC9-211ENST00000430454 ADD2P35612 726 aa10.99□□□□□ -0.65
HDAC9-211ENST00000430454 PRKCZQ05513 592 aa10.99□□□□□ -0.65
HDAC9-211ENST00000430454 IRF5Q13568 498 aa10.99□□□□□ -0.65
HDAC9-211ENST00000430454 AAMPQ13685 434 aa10.99□□□□□ -0.65
HDAC9-211ENST00000430454 RAB3GAP1Q15042 981 aa10.99□□□□□ -0.65
HDAC9-211ENST00000430454 C20orf194Q5TEA3 1177 aa10.99□□□□□ -0.65
HDAC9-211ENST00000430454 CCDC84Q86UT8 332 aaPredicted RBP10.99□□□□□ -0.65
HDAC9-211ENST00000430454 GPRC5AQ8NFJ5 357 aa10.99□□□□□ -0.65
HDAC9-211ENST00000430454 GCC1Q96CN9 775 aa10.99□□□□□ -0.65
HDAC9-211ENST00000430454 SH2D4AQ9H788 454 aa10.99□□□□□ -0.65
HDAC9-211ENST00000430454 HTTP42858 3142 aa10.99□□□□□ -0.65
HDAC9-211ENST00000430454 TCRBV5S4A2TA0A5A2 114 aa10.98□□□□□ -0.65
HDAC9-211ENST00000430454 POTEFA5A3E0 1075 aa10.98□□□□□ -0.65
HDAC9-211ENST00000430454 USP17L15C9J2P7 530 aa10.98□□□□□ -0.65
HDAC9-211ENST00000430454 USP17L13C9JLJ4 530 aa10.98□□□□□ -0.65
HDAC9-211ENST00000430454 USP17L11C9JVI0 530 aa10.98□□□□□ -0.65
HDAC9-211ENST00000430454 USP17L18D6R9N7 530 aa10.98□□□□□ -0.65
HDAC9-211ENST00000430454 USP17L22D6RA61 530 aa10.98□□□□□ -0.65
HDAC9-211ENST00000430454 USP17L17D6RBQ6 530 aa10.98□□□□□ -0.65
HDAC9-211ENST00000430454 USP17L19D6RCP7 530 aa10.98□□□□□ -0.65
HDAC9-211ENST00000430454 USP17L20D6RJB6 530 aa10.98□□□□□ -0.65
HDAC9-211ENST00000430454 MPHOSPH10O00566 681 aaKnown RBP10.98□□□□□ -0.65
HDAC9-211ENST00000430454 ADCY3O60266 1144 aa10.98□□□□□ -0.65
HDAC9-211ENST00000430454 MBD4O95243 580 aa10.98□□□□□ -0.65
HDAC9-211ENST00000430454 FLT3LGP49771 235 aa10.98□□□□□ -0.65
HDAC9-211ENST00000430454 CCNA1P78396 465 aa10.98□□□□□ -0.65
HDAC9-211ENST00000430454 USP17L24Q0WX57 530 aa10.98□□□□□ -0.65
HDAC9-211ENST00000430454 RRP1BQ14684 758 aaKnown RBP10.98□□□□□ -0.65
HDAC9-211ENST00000430454 TRMT44Q8IYL2 757 aaKnown RBP10.98□□□□□ -0.65
HDAC9-211ENST00000430454 KIAA1683Q9H0B3 1180 aa10.98□□□□□ -0.65
HDAC9-211ENST00000430454 DNAJC18Q9H819 358 aa10.98□□□□□ -0.65
HDAC9-211ENST00000430454 FRMD4AQ9P2Q2 1039 aaPredicted RBP10.98□□□□□ -0.65
HDAC9-211ENST00000430454 MORF4L1Q9UBU8 362 aa10.98□□□□□ -0.65
HDAC9-211ENST00000430454 MYCP01106 439 aaPredicted RBP10.97□□□□□ -0.65
HDAC9-211ENST00000430454 GJB1P08034 283 aa10.97□□□□□ -0.65
HDAC9-211ENST00000430454 EN2P19622 333 aaPredicted RBP10.97□□□□□ -0.65
HDAC9-211ENST00000430454 MAPK4P31152 587 aa10.97□□□□□ -0.65
HDAC9-211ENST00000430454 HERVK_113P62684 666 aa10.97□□□□□ -0.65
HDAC9-211ENST00000430454 CAP1Q01518 475 aa10.97□□□□□ -0.65
HDAC9-211ENST00000430454 TMEM179Q6ZVK1 233 aa10.97□□□□□ -0.65
HDAC9-211ENST00000430454 LCORLQ8N3X6 602 aa10.97□□□□□ -0.65
HDAC9-211ENST00000430454 SOCS4Q8WXH5 440 aa10.97□□□□□ -0.65
HDAC9-211ENST00000430454 C12orf42Q96LP6 360 aa10.97□□□□□ -0.65
HDAC9-211ENST00000430454 CCDC17Q96LX7 622 aa10.97□□□□□ -0.65
HDAC9-211ENST00000430454 RNF208Q9H0X6 261 aa10.97□□□□□ -0.65
HDAC9-211ENST00000430454 ARMT1Q9H993 441 aa10.97□□□□□ -0.65
HDAC9-211ENST00000430454 ZNF287Q9HBT7 754 aa10.97□□□□□ -0.65
HDAC9-211ENST00000430454 ARHGEF10LQ9HCE6 1279 aa10.97□□□□□ -0.65
HDAC9-211ENST00000430454 DCP1AQ9NPI6 582 aaPredicted RBP10.97□□□□□ -0.65
HDAC9-211ENST00000430454 FOCADQ5VW36 1801 aa10.97□□□□□ -0.65
HDAC9-211ENST00000430454 ATAD5Q96QE3 1844 aa10.96□□□□□ -0.65
HDAC9-211ENST00000430454 TTC41PQ6P2S7 1318 aa10.96□□□□□ -0.65
HDAC9-211ENST00000430454 CCL5P13501 91 aa10.96□□□□□ -0.65
HDAC9-211ENST00000430454 GNAT2P19087 354 aa10.96□□□□□ -0.65
HDAC9-211ENST00000430454 CTGFP29279 349 aa10.96□□□□□ -0.65
HDAC9-211ENST00000430454 SHMT1P34896 483 aa10.96□□□□□ -0.65
HDAC9-211ENST00000430454 PLCD1P51178 756 aa10.96□□□□□ -0.65
HDAC9-211ENST00000430454 RRP1P56182 461 aaKnown RBP10.96□□□□□ -0.65
HDAC9-211ENST00000430454 P2RX7Q99572 595 aaKnown RBP10.96□□□□□ -0.65
HDAC9-211ENST00000430454 SLC4A4Q9Y6R1 1079 aa10.96□□□□□ -0.65
HDAC9-211ENST00000430454 MYH1P12882 1939 aa10.96□□□□□ -0.66
HDAC9-211ENST00000430454 PHIPQ8WWQ0 1821 aa10.95□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms