RNA–Protein interactions for RNA: ENST00000429456.1

LINC01238-203, Transcript of long intergenic non-protein coding RNA 1238, humanhuman

TSL 2 BASIC

Gene LINC01238, Length 2,170 nt, Biotype lincRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01238-203ENST00000429456 RNF41Q9H4P4 317 aaPredicted RBP13.17□□□□□ -0.3
LINC01238-203ENST00000429456 SEC31BQ9NQW1 1179 aa13.17□□□□□ -0.3
LINC01238-203ENST00000429456 TOMM22Q9NS69 142 aa13.17□□□□□ -0.3
LINC01238-203ENST00000429456 ZNF446Q9NWS9 450 aa13.17□□□□□ -0.3
LINC01238-203ENST00000429456 PLCH1Q4KWH8 1693 aa13.16□□□□□ -0.3
LINC01238-203ENST00000429456 NPHP1O15259 732 aa13.16□□□□□ -0.3
LINC01238-203ENST00000429456 ACTN4O43707 911 aaKnown RBP13.16□□□□□ -0.3
LINC01238-203ENST00000429456 BCAMP50895 628 aa13.16□□□□□ -0.3
LINC01238-203ENST00000429456 KANK3Q6NY19 840 aa13.16□□□□□ -0.3
LINC01238-203ENST00000429456 OXER1Q8TDS5 423 aa13.16□□□□□ -0.3
LINC01238-203ENST00000429456 SRRTQ9BXP5 876 aaKnown RBP13.16□□□□□ -0.3
LINC01238-203ENST00000429456 BTG4Q9NY30 223 aa13.16□□□□□ -0.3
LINC01238-203ENST00000429456 CEP131Q9UPN4 1083 aa13.16□□□□□ -0.3
LINC01238-203ENST00000429456 NFE2L3Q9Y4A8 694 aa13.16□□□□□ -0.3
LINC01238-203ENST00000429456 VWA3AA6NCI4 1184 aa13.15□□□□□ -0.3
LINC01238-203ENST00000429456 PPARAQ07869 468 aa13.15□□□□□ -0.3
LINC01238-203ENST00000429456 CMTR1Q8N1G2 835 aaKnown RBP13.15□□□□□ -0.3
LINC01238-203ENST00000429456 CCDC82Q8N4S0 544 aa13.15□□□□□ -0.3
LINC01238-203ENST00000429456 SPATA20Q8TB22 786 aa13.15□□□□□ -0.3
LINC01238-203ENST00000429456 PPP2R2CQ9Y2T4 447 aa13.15□□□□□ -0.3
LINC01238-203ENST00000429456 SLFN14P0C7P3 912 aa13.15□□□□□ -0.3
LINC01238-203ENST00000429456 EIF5P55010 431 aaKnown RBP13.15□□□□□ -0.3
LINC01238-203ENST00000429456 SEC23AQ15436 765 aa13.15□□□□□ -0.3
LINC01238-203ENST00000429456 TC2NQ8N9U0 490 aa13.15□□□□□ -0.3
LINC01238-203ENST00000429456 NUP133Q8WUM0 1156 aa13.15□□□□□ -0.3
LINC01238-203ENST00000429456 MED15Q96RN5 788 aa13.15□□□□□ -0.3
LINC01238-203ENST00000429456 BAG1Q99933 345 aaPredicted RBP13.15□□□□□ -0.3
LINC01238-203ENST00000429456 STX10O60499 249 aa13.14□□□□□ -0.31
LINC01238-203ENST00000429456 IGSF3O75054 1194 aa13.14□□□□□ -0.31
LINC01238-203ENST00000429456 ZNF827Q17R98 1081 aa13.14□□□□□ -0.31
LINC01238-203ENST00000429456 HSP90AA4PQ58FG1 418 aa13.14□□□□□ -0.31
LINC01238-203ENST00000429456 SPECC1LQ69YQ0 1117 aa13.14□□□□□ -0.31
LINC01238-203ENST00000429456 GRAMD1CQ8IYS0 662 aa13.14□□□□□ -0.31
LINC01238-203ENST00000429456 MIGA1Q8NAN2 632 aa13.14□□□□□ -0.31
LINC01238-203ENST00000429456 RNF26Q9BY78 433 aaPredicted RBP13.14□□□□□ -0.31
LINC01238-203ENST00000429456 CSRNP2Q9H175 543 aa13.14□□□□□ -0.31
LINC01238-203ENST00000429456 CABP5Q9NP86 173 aa13.14□□□□□ -0.31
LINC01238-203ENST00000429456 ANAPC4Q9UJX5 808 aa13.14□□□□□ -0.31
LINC01238-203ENST00000429456 PARP3Q9Y6F1 533 aa13.14□□□□□ -0.31
LINC01238-203ENST00000429456 RTL9Q8NET4 1388 aa13.14□□□□□ -0.31
LINC01238-203ENST00000429456 PHLPP1O60346 1717 aa13.14□□□□□ -0.31
LINC01238-203ENST00000429456 CDK11BP21127 795 aaKnown RBP13.14□□□□□ -0.31
LINC01238-203ENST00000429456 ERCC5P28715 1186 aaPredicted RBP13.14□□□□□ -0.31
LINC01238-203ENST00000429456 PLCD1P51178 756 aa13.14□□□□□ -0.31
LINC01238-203ENST00000429456 CLCN6P51797 869 aa13.14□□□□□ -0.31
LINC01238-203ENST00000429456 PPP2R5BQ15173 497 aa13.14□□□□□ -0.31
LINC01238-203ENST00000429456 ARHGAP29Q52LW3 1261 aa13.14□□□□□ -0.31
LINC01238-203ENST00000429456 USP49Q70CQ1 688 aa13.14□□□□□ -0.31
LINC01238-203ENST00000429456 NUTM2AQ8IVF1 878 aaPredicted RBP13.14□□□□□ -0.31
LINC01238-203ENST00000429456 TRMT44Q8IYL2 757 aaKnown RBP13.14□□□□□ -0.31
LINC01238-203ENST00000429456 SHISA4Q96DD7 197 aa13.14□□□□□ -0.31
LINC01238-203ENST00000429456 UBAC1Q9BSL1 405 aa13.14□□□□□ -0.31
LINC01238-203ENST00000429456 AATFQ9NY61 560 aaKnown RBP eCLIP13.14□□□□□ -0.31
LINC01238-203ENST00000429456 LRP2BPQ9P2M1 347 aa13.14□□□□□ -0.31
LINC01238-203ENST00000429456 GOLGA6L9A6NEM1 432 aa13.13□□□□□ -0.31
LINC01238-203ENST00000429456 TADA3O75528 432 aa13.13□□□□□ -0.31
LINC01238-203ENST00000429456 BRD2P25440 801 aaKnown RBP13.13□□□□□ -0.31
LINC01238-203ENST00000429456 IGHMBP2P38935 993 aaKnown RBP13.13□□□□□ -0.31
LINC01238-203ENST00000429456 BMS1Q14692 1282 aaKnown RBP13.13□□□□□ -0.31
LINC01238-203ENST00000429456 NR1I3Q14994 352 aa13.13□□□□□ -0.31
LINC01238-203ENST00000429456 CCDC152Q4G0S7 254 aa13.13□□□□□ -0.31
LINC01238-203ENST00000429456 CT47A1Q5JQC4 288 aaPredicted RBP13.13□□□□□ -0.31
LINC01238-203ENST00000429456 PDILTQ8N807 584 aa13.13□□□□□ -0.31
LINC01238-203ENST00000429456 BCL9LQ86UU0 1499 aa13.13□□□□□ -0.31
LINC01238-203ENST00000429456 TNKSO95271 1327 aa13.13□□□□□ -0.31
LINC01238-203ENST00000429456 URI1O94763 535 aaPredicted RBP13.13□□□□□ -0.31
LINC01238-203ENST00000429456 ATP2B1P20020 1258 aa13.13□□□□□ -0.31
LINC01238-203ENST00000429456 CYP7A1P22680 504 aa13.13□□□□□ -0.31
LINC01238-203ENST00000429456 TERF2Q15554 542 aa13.13□□□□□ -0.31
LINC01238-203ENST00000429456 PKN1Q16512 942 aa13.13□□□□□ -0.31
LINC01238-203ENST00000429456 INTS5Q6P9B9 1019 aaKnown RBP13.13□□□□□ -0.31
LINC01238-203ENST00000429456 ADGRA1Q86SQ6 560 aa13.13□□□□□ -0.31
LINC01238-203ENST00000429456 UBXN4Q92575 508 aa13.13□□□□□ -0.31
LINC01238-203ENST00000429456 ESR2Q92731 530 aa13.13□□□□□ -0.31
LINC01238-203ENST00000429456 SAMSN1Q9NSI8 373 aaKnown RBP13.13□□□□□ -0.31
LINC01238-203ENST00000429456 RAI14Q9P0K7 980 aa13.13□□□□□ -0.31
LINC01238-203ENST00000429456 MYH2Q9UKX2 1941 aa13.12□□□□□ -0.31
LINC01238-203ENST00000429456 LAMB2P55268 1798 aa13.12□□□□□ -0.31
LINC01238-203ENST00000429456 A0A1B0GTH6 734 aa13.12□□□□□ -0.31
LINC01238-203ENST00000429456 TRIM75PA6NK02 468 aa13.12□□□□□ -0.31
LINC01238-203ENST00000429456 EXOC5O00471 708 aa13.12□□□□□ -0.31
LINC01238-203ENST00000429456 ADKP55263 362 aaKnown RBP13.12□□□□□ -0.31
LINC01238-203ENST00000429456 CHRNDQ07001 517 aa13.12□□□□□ -0.31
LINC01238-203ENST00000429456 FUT2Q10981 343 aa13.12□□□□□ -0.31
LINC01238-203ENST00000429456 PARP10Q53GL7 1025 aa13.12□□□□□ -0.31
LINC01238-203ENST00000429456 SH3RF1Q7Z6J0 888 aa13.12□□□□□ -0.31
LINC01238-203ENST00000429456 MNS1Q8NEH6 495 aa13.12□□□□□ -0.31
LINC01238-203ENST00000429456 PHF20Q9BVI0 1012 aa13.12□□□□□ -0.31
LINC01238-203ENST00000429456 FHOD1Q9Y613 1164 aa13.12□□□□□ -0.31
LINC01238-203ENST00000429456 A0A087X0B3 334 aa13.11□□□□□ -0.31
LINC01238-203ENST00000429456 FAM205CA6NFA0 338 aa13.11□□□□□ -0.31
LINC01238-203ENST00000429456 EFCAB8A8MWE9 144 aa13.11□□□□□ -0.31
LINC01238-203ENST00000429456 PRPF3O43395 683 aaKnown RBP13.11□□□□□ -0.31
LINC01238-203ENST00000429456 XBP1P17861 261 aa13.11□□□□□ -0.31
LINC01238-203ENST00000429456 TOGARAM2Q6ZUX3 1019 aa13.11□□□□□ -0.31
LINC01238-203ENST00000429456 ZNF771Q7L3S4 317 aaPredicted RBP13.11□□□□□ -0.31
LINC01238-203ENST00000429456 SDR42E1Q8WUS8 393 aa13.11□□□□□ -0.31
LINC01238-203ENST00000429456 CARD6Q9BX69 1037 aa13.11□□□□□ -0.31
LINC01238-203ENST00000429456 COL14A1Q05707 1796 aaKnown RBP13.11□□□□□ -0.31
LINC01238-203ENST00000429456 MAGEB6P1A0A0J9YX57 407 aa13.11□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms