RNA–Protein interactions for RNA: ENST00000429411.5

HPS4-205, Transcript of HPS4, biogenesis of lysosomal organelles complex 3 subunit 2, humanhuman

TSL 2

Gene HPS4, Length 3,492 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4-205ENST00000429411 LRRN4CLQ8ND94 238 aa9.18□□□□□ -0.94
HPS4-205ENST00000429411 NOL10Q9BSC4 688 aaKnown RBP9.18□□□□□ -0.94
HPS4-205ENST00000429411 SAMSN1Q9NSI8 373 aaKnown RBP9.18□□□□□ -0.94
HPS4-205ENST00000429411 ATG3Q9NT62 314 aa9.18□□□□□ -0.94
HPS4-205ENST00000429411 ZMYM6O95789 1325 aa9.18□□□□□ -0.94
HPS4-205ENST00000429411 MAFGO15525 162 aa9.18□□□□□ -0.94
HPS4-205ENST00000429411 PCCAP05165 728 aaPredicted RBP9.18□□□□□ -0.94
HPS4-205ENST00000429411 UQCRFS1P1P0C7P4 283 aa9.18□□□□□ -0.94
HPS4-205ENST00000429411 CDC25AP30304 524 aa9.18□□□□□ -0.94
HPS4-205ENST00000429411 NLRP5P59047 1200 aa9.18□□□□□ -0.94
HPS4-205ENST00000429411 POSTNQ15063 836 aa9.18□□□□□ -0.94
HPS4-205ENST00000429411 GPR162Q16538 588 aa9.18□□□□□ -0.94
HPS4-205ENST00000429411 TSR1Q2NL82 804 aaKnown RBP9.18□□□□□ -0.94
HPS4-205ENST00000429411 SARM1Q6SZW1 724 aa9.18□□□□□ -0.94
HPS4-205ENST00000429411 SGSM3Q96HU1 749 aa9.18□□□□□ -0.94
HPS4-205ENST00000429411 NUP88Q99567 741 aaPredicted RBP9.18□□□□□ -0.94
HPS4-205ENST00000429411 GPR108Q9NPR9 543 aa9.18□□□□□ -0.94
HPS4-205ENST00000429411 DACH1Q9UI36 760 aa9.18□□□□□ -0.94
HPS4-205ENST00000429411 PCDHB6Q9Y5E3 794 aa9.18□□□□□ -0.94
HPS4-205ENST00000429411 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP9.18□□□□□ -0.94
HPS4-205ENST00000429411 KIF1AQ12756 1690 aa9.18□□□□□ -0.94
HPS4-205ENST00000429411 ERVV-2B6SEH9 535 aa9.18□□□□□ -0.94
HPS4-205ENST00000429411 ERCC3P19447 782 aa9.18□□□□□ -0.94
HPS4-205ENST00000429411 CDC25BP30305 580 aa9.18□□□□□ -0.94
HPS4-205ENST00000429411 MCM7P33993 719 aa9.18□□□□□ -0.94
HPS4-205ENST00000429411 GYG1P46976 350 aa9.18□□□□□ -0.94
HPS4-205ENST00000429411 BMS1Q14692 1282 aaKnown RBP9.18□□□□□ -0.94
HPS4-205ENST00000429411 IFIT1BQ5T764 474 aaKnown RBP9.18□□□□□ -0.94
HPS4-205ENST00000429411 KRBA2Q6ZNG9 492 aa9.18□□□□□ -0.94
HPS4-205ENST00000429411 RBM43Q6ZSC3 357 aaKnown RBP9.18□□□□□ -0.94
HPS4-205ENST00000429411 NOSTRINQ8IVI9 506 aa9.18□□□□□ -0.94
HPS4-205ENST00000429411 ANKRD20A12PQ8NF67 263 aa9.18□□□□□ -0.94
HPS4-205ENST00000429411 VPS16Q9H269 839 aa9.18□□□□□ -0.94
HPS4-205ENST00000429411 RGPD1P0DJD0 1748 aa9.17□□□□□ -0.94
HPS4-205ENST00000429411 CCDC196A0A1B0GTZ2 297 aa9.17□□□□□ -0.94
HPS4-205ENST00000429411 SH2B2O14492 632 aaPredicted RBP9.17□□□□□ -0.94
HPS4-205ENST00000429411 N4BP3O15049 544 aa9.17□□□□□ -0.94
HPS4-205ENST00000429411 CIAO1O76071 339 aa9.17□□□□□ -0.94
HPS4-205ENST00000429411 ETF1P62495 437 aaKnown RBP9.17□□□□□ -0.94
HPS4-205ENST00000429411 PUM3Q15397 648 aaKnown RBP9.17□□□□□ -0.94
HPS4-205ENST00000429411 SLC15A2Q16348 729 aa9.17□□□□□ -0.94
HPS4-205ENST00000429411 AKNAD1Q5T1N1 836 aa9.17□□□□□ -0.94
HPS4-205ENST00000429411 USP49Q70CQ1 688 aa9.17□□□□□ -0.94
HPS4-205ENST00000429411 NLRP10Q86W26 655 aa9.17□□□□□ -0.94
HPS4-205ENST00000429411 LCORLQ8N3X6 602 aa9.17□□□□□ -0.94
HPS4-205ENST00000429411 OXER1Q8TDS5 423 aa9.17□□□□□ -0.94
HPS4-205ENST00000429411 GNL3Q9BVP2 549 aaKnown RBP eCLIP9.17□□□□□ -0.94
HPS4-205ENST00000429411 GTPBP4Q9BZE4 634 aaKnown RBP9.17□□□□□ -0.94
HPS4-205ENST00000429411 FAM205CA6NFA0 338 aa9.17□□□□□ -0.94
HPS4-205ENST00000429411 TRIM75PA6NK02 468 aa9.17□□□□□ -0.94
HPS4-205ENST00000429411 PRR29P0C7W0 189 aa9.17□□□□□ -0.94
HPS4-205ENST00000429411 POLD1P28340 1107 aa9.17□□□□□ -0.94
HPS4-205ENST00000429411 RASGRF1Q13972 1273 aa9.17□□□□□ -0.94
HPS4-205ENST00000429411 RRAGBQ5VZM2 374 aa9.17□□□□□ -0.94
HPS4-205ENST00000429411 GIGYF2Q6Y7W6 1299 aaKnown RBP9.17□□□□□ -0.94
HPS4-205ENST00000429411 CATIPQ7Z7H3 387 aa9.17□□□□□ -0.94
HPS4-205ENST00000429411 IQCA1Q86XH1 822 aa9.17□□□□□ -0.94
HPS4-205ENST00000429411 CCDC125Q86Z20 511 aa9.17□□□□□ -0.94
HPS4-205ENST00000429411 ANKRD7Q92527 254 aa9.17□□□□□ -0.94
HPS4-205ENST00000429411 SMARCC1Q92922 1105 aaPredicted RBP9.17□□□□□ -0.94
HPS4-205ENST00000429411 TMEM87BQ96K49 555 aa9.17□□□□□ -0.94
HPS4-205ENST00000429411 CAMKK2Q96RR4 588 aa9.17□□□□□ -0.94
HPS4-205ENST00000429411 KRT23Q9C075 422 aa9.17□□□□□ -0.94
HPS4-205ENST00000429411 SPON1Q9HCB6 807 aa9.17□□□□□ -0.94
HPS4-205ENST00000429411 IMPACTQ9P2X3 320 aa9.17□□□□□ -0.94
HPS4-205ENST00000429411 CACNA1FO60840 1977 aa9.17□□□□□ -0.94
HPS4-205ENST00000429411 LOC102724159A0A0B4J2E5 919 aa9.17□□□□□ -0.94
HPS4-205ENST00000429411 PDE8AO60658 829 aa9.17□□□□□ -0.94
HPS4-205ENST00000429411 CUTAO60888 179 aa9.17□□□□□ -0.94
HPS4-205ENST00000429411 PHACTR2O75167 634 aa9.17□□□□□ -0.94
HPS4-205ENST00000429411 RHOXF2BP0C7M4 288 aa9.17□□□□□ -0.94
HPS4-205ENST00000429411 PWP2Q15269 919 aaKnown RBP9.17□□□□□ -0.94
HPS4-205ENST00000429411 FAM47AQ5JRC9 791 aa9.17□□□□□ -0.94
HPS4-205ENST00000429411 TRAPPC3LQ5T215 181 aa9.17□□□□□ -0.94
HPS4-205ENST00000429411 NKX2-3Q8TAU0 364 aa9.17□□□□□ -0.94
HPS4-205ENST00000429411 RHOXF2Q9BQY4 288 aa9.17□□□□□ -0.94
HPS4-205ENST00000429411 IRX2Q9BZI1 471 aaPredicted RBP9.17□□□□□ -0.94
HPS4-205ENST00000429411 NHSL1Q5SYE7 1610 aa9.16□□□□□ -0.94
HPS4-205ENST00000429411 ITPK1Q13572 414 aa9.16□□□□□ -0.94
HPS4-205ENST00000429411 NBPF11Q86T75 865 aa9.16□□□□□ -0.94
HPS4-205ENST00000429411 CTCFLQ8NI51 663 aaPredicted RBP9.16□□□□□ -0.94
HPS4-205ENST00000429411 LPIN2Q92539 896 aa9.16□□□□□ -0.94
HPS4-205ENST00000429411 EPSTI1Q96J88 318 aa9.16□□□□□ -0.94
HPS4-205ENST00000429411 HINFPQ9BQA5 517 aa9.16□□□□□ -0.94
HPS4-205ENST00000429411 TEX13AQ9BXU3 409 aaPredicted RBP9.16□□□□□ -0.94
HPS4-205ENST00000429411 VAT1LQ9HCJ6 419 aa9.16□□□□□ -0.94
HPS4-205ENST00000429411 GNL3LQ9NVN8 582 aaKnown RBP9.16□□□□□ -0.94
HPS4-205ENST00000429411 CEP131Q9UPN4 1083 aa9.16□□□□□ -0.94
HPS4-205ENST00000429411 RGPD2P0DJD1 1756 aa9.16□□□□□ -0.94
HPS4-205ENST00000429411 TSPY2A6NKD2 308 aa9.16□□□□□ -0.94
HPS4-205ENST00000429411 CTIFO43310 598 aaKnown RBP9.16□□□□□ -0.94
HPS4-205ENST00000429411 PDE4BQ07343 736 aa9.16□□□□□ -0.94
HPS4-205ENST00000429411 ZNF569Q5MCW4 686 aa9.16□□□□□ -0.94
HPS4-205ENST00000429411 ZNF654Q8IZM8 581 aa9.16□□□□□ -0.94
HPS4-205ENST00000429411 IGSF22Q8N9C0 903 aa9.16□□□□□ -0.94
HPS4-205ENST00000429411 ESR2Q92731 530 aa9.16□□□□□ -0.94
HPS4-205ENST00000429411 CSRNP2Q9H175 543 aa9.16□□□□□ -0.94
HPS4-205ENST00000429411 PPP2R2CQ9Y2T4 447 aa9.16□□□□□ -0.94
HPS4-205ENST00000429411 LTN1O94822 1766 aa9.16□□□□□ -0.94
HPS4-205ENST00000429411 MAP3K15Q6ZN16 1313 aa9.15□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms