RNA–Protein interactions for RNA: ENST00000428828.1

CECR3-201, Transcript of cat eye syndrome chromosome region, candidate 3, humanhuman

TSL 1 (best) BASIC

Gene CECR3, Length 1,915 nt, Biotype lincRNA.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CECR3-201ENST00000428828 CUL4AQ13619 759 aa13.24□□□□□ -0.29
CECR3-201ENST00000428828 EPB41L4AQ9HCS5 686 aaPredicted RBP13.24□□□□□ -0.29
CECR3-201ENST00000428828 ASTN2O75129 1339 aaPredicted RBP13.24□□□□□ -0.29
CECR3-201ENST00000428828 GSG1L2A8MUP6 293 aa13.23□□□□□ -0.29
CECR3-201ENST00000428828 PATL2C9JE40 543 aaKnown RBP13.23□□□□□ -0.29
CECR3-201ENST00000428828 MYO1BO43795 1136 aa13.23□□□□□ -0.29
CECR3-201ENST00000428828 NFIAQ12857 509 aa13.23□□□□□ -0.29
CECR3-201ENST00000428828 C17orf53Q8N3J3 647 aaPredicted RBP13.23□□□□□ -0.29
CECR3-201ENST00000428828 TMOD2Q9NZR1 351 aa13.23□□□□□ -0.29
CECR3-201ENST00000428828 SAP30BPQ9UHR5 308 aaKnown RBP13.23□□□□□ -0.29
CECR3-201ENST00000428828 HACL1Q9UJ83 578 aa13.23□□□□□ -0.29
CECR3-201ENST00000428828 PYCARDQ9ULZ3 195 aa13.23□□□□□ -0.29
CECR3-201ENST00000428828 RBM8AQ9Y5S9 174 aaKnown RBP13.23□□□□□ -0.29
CECR3-201ENST00000428828 SIPA1L1O43166 1804 aa13.23□□□□□ -0.29
CECR3-201ENST00000428828 TCP10L2B9ZVM9 353 aa13.23□□□□□ -0.29
CECR3-201ENST00000428828 TCP10Q12799 353 aa13.23□□□□□ -0.29
CECR3-201ENST00000428828 CERS3Q8IU89 383 aa13.23□□□□□ -0.29
CECR3-201ENST00000428828 IFNL3Q8IZI9 196 aa13.23□□□□□ -0.29
CECR3-201ENST00000428828 L3MBTL3Q96JM7 780 aaPredicted RBP13.23□□□□□ -0.29
CECR3-201ENST00000428828 DSCC1Q9BVC3 393 aa13.23□□□□□ -0.29
CECR3-201ENST00000428828 NAPBQ9H115 298 aa13.23□□□□□ -0.29
CECR3-201ENST00000428828 DDX4Q9NQI0 724 aaKnown RBP13.23□□□□□ -0.29
CECR3-201ENST00000428828 ADARB2Q9NS39 739 aaKnown RBP13.23□□□□□ -0.29
CECR3-201ENST00000428828 ZNF70Q9UC06 446 aaPredicted RBP13.23□□□□□ -0.29
CECR3-201ENST00000428828 FLT1P17948 1338 aa13.22□□□□□ -0.29
CECR3-201ENST00000428828 WDHD1O75717 1129 aaPredicted RBP13.22□□□□□ -0.29
CECR3-201ENST00000428828 HAND2P61296 217 aa13.22□□□□□ -0.29
CECR3-201ENST00000428828 STK11IPQ8N1F8 1099 aa13.22□□□□□ -0.29
CECR3-201ENST00000428828 MTMR14Q8NCE2 650 aa13.22□□□□□ -0.29
CECR3-201ENST00000428828 CCDC112Q8NEF3 446 aa13.22□□□□□ -0.29
CECR3-201ENST00000428828 MAP4K1Q92918 833 aa13.22□□□□□ -0.29
CECR3-201ENST00000428828 ZBED3Q96IU2 234 aaPredicted RBP13.22□□□□□ -0.29
CECR3-201ENST00000428828 NACAP1Q9BZK3 213 aa13.22□□□□□ -0.29
CECR3-201ENST00000428828 BRMS1Q9HCU9 246 aa13.22□□□□□ -0.29
CECR3-201ENST00000428828 DCP1AQ9NPI6 582 aaPredicted RBP13.22□□□□□ -0.29
CECR3-201ENST00000428828 MCM9Q9NXL9 1143 aa13.22□□□□□ -0.29
CECR3-201ENST00000428828 CYP2D7A0A087X1C5 515 aa13.21□□□□□ -0.29
CECR3-201ENST00000428828 FGAP02671 866 aa13.21□□□□□ -0.29
CECR3-201ENST00000428828 EPHX2P34913 555 aa13.21□□□□□ -0.29
CECR3-201ENST00000428828 PSEN1P49768 467 aa13.21□□□□□ -0.29
CECR3-201ENST00000428828 HIRAP54198 1017 aaPredicted RBP13.21□□□□□ -0.29
CECR3-201ENST00000428828 SPDYE2Q495Y8 402 aa13.21□□□□□ -0.29
CECR3-201ENST00000428828 EAPPQ56P03 285 aaPredicted RBP13.21□□□□□ -0.29
CECR3-201ENST00000428828 MINDY4BA8MYZ0 360 aa13.21□□□□□ -0.3
CECR3-201ENST00000428828 EVX2Q03828 476 aa13.21□□□□□ -0.3
CECR3-201ENST00000428828 ANGEL2Q5VTE6 544 aaKnown RBP13.21□□□□□ -0.3
CECR3-201ENST00000428828 FUCA2Q9BTY2 467 aa13.21□□□□□ -0.3
CECR3-201ENST00000428828 RRAGCQ9HB90 399 aa13.21□□□□□ -0.3
CECR3-201ENST00000428828 ATP8A2Q9NTI2 1148 aa13.21□□□□□ -0.3
CECR3-201ENST00000428828 GGA3Q9NZ52 723 aa13.21□□□□□ -0.3
CECR3-201ENST00000428828 U3KPZ7 1027 aaPredicted RBP13.21□□□□□ -0.3
CECR3-201ENST00000428828 IQCA1LA6NCM1 817 aa13.2□□□□□ -0.3
CECR3-201ENST00000428828 POTECB2RU33 542 aa13.2□□□□□ -0.3
CECR3-201ENST00000428828 CYP2D6P10635 497 aa13.2□□□□□ -0.3
CECR3-201ENST00000428828 NOP2P46087 812 aaKnown RBP13.2□□□□□ -0.3
CECR3-201ENST00000428828 RAD51AP2Q09MP3 1159 aa13.2□□□□□ -0.3
CECR3-201ENST00000428828 ZFPM1Q8IX07 1006 aa13.2□□□□□ -0.3
CECR3-201ENST00000428828 FAM198AQ9UFP1 575 aa13.2□□□□□ -0.3
CECR3-201ENST00000428828 PALD1Q9ULE6 856 aa13.2□□□□□ -0.3
CECR3-201ENST00000428828 USP17L12C9JPN9 530 aa13.19□□□□□ -0.3
CECR3-201ENST00000428828 USP17L21D6R901 530 aa13.19□□□□□ -0.3
CECR3-201ENST00000428828 SMIM22K7EJ46 135 aa13.19□□□□□ -0.3
CECR3-201ENST00000428828 POLR3DP05423 398 aaPredicted RBP13.19□□□□□ -0.3
CECR3-201ENST00000428828 MCCP23508 829 aa13.19□□□□□ -0.3
CECR3-201ENST00000428828 HNRNPH2P55795 449 aaKnown RBP13.19□□□□□ -0.3
CECR3-201ENST00000428828 BMS1Q14692 1282 aaKnown RBP13.19□□□□□ -0.3
CECR3-201ENST00000428828 ZSCAN29Q8IWY8 852 aaPredicted RBP13.19□□□□□ -0.3
CECR3-201ENST00000428828 OSBPL5Q9H0X9 879 aaPredicted RBP13.19□□□□□ -0.3
CECR3-201ENST00000428828 RASSF4Q9H2L5 321 aa13.19□□□□□ -0.3
CECR3-201ENST00000428828 ZSCAN21Q9Y5A6 473 aaPredicted RBP13.19□□□□□ -0.3
CECR3-201ENST00000428828 RPAP1Q9BWH6 1393 aaPredicted RBP13.19□□□□□ -0.3
CECR3-201ENST00000428828 CTDSPL2Q05D32 466 aa13.19□□□□□ -0.3
CECR3-201ENST00000428828 IMMTQ16891 758 aaKnown RBP13.19□□□□□ -0.3
CECR3-201ENST00000428828 CREB3L3Q68CJ9 461 aa13.19□□□□□ -0.3
CECR3-201ENST00000428828 TXLNBQ8N3L3 684 aa13.19□□□□□ -0.3
CECR3-201ENST00000428828 IL17RAQ96F46 866 aa13.19□□□□□ -0.3
CECR3-201ENST00000428828 ERO1AQ96HE7 468 aa13.19□□□□□ -0.3
CECR3-201ENST00000428828 TAF1DQ9H5J8 278 aaPredicted RBP13.19□□□□□ -0.3
CECR3-201ENST00000428828 NMRK2Q9NPI5 230 aa13.19□□□□□ -0.3
CECR3-201ENST00000428828 ZKSCAN7Q9P0L1 754 aaPredicted RBP13.19□□□□□ -0.3
CECR3-201ENST00000428828 BCCIPQ9P287 314 aaKnown RBP eCLIP13.19□□□□□ -0.3
CECR3-201ENST00000428828 TAF6LQ9Y6J9 622 aa13.19□□□□□ -0.3
CECR3-201ENST00000428828 SLC27A2O14975 620 aa13.18□□□□□ -0.3
CECR3-201ENST00000428828 CYP21A2P08686 494 aa13.18□□□□□ -0.3
CECR3-201ENST00000428828 HSPA4P34932 840 aa13.18□□□□□ -0.3
CECR3-201ENST00000428828 KMT5BQ4FZB7 885 aa13.18□□□□□ -0.3
CECR3-201ENST00000428828 ARHGAP30Q7Z6I6 1101 aaPredicted RBP13.18□□□□□ -0.3
CECR3-201ENST00000428828 AMOTL1Q8IY63 956 aa13.18□□□□□ -0.3
CECR3-201ENST00000428828 IDI2Q9BXS1 227 aa13.18□□□□□ -0.3
CECR3-201ENST00000428828 TMEM39BQ9GZU3 492 aa13.18□□□□□ -0.3
CECR3-201ENST00000428828 ARPP21Q9UBL0 812 aaPredicted RBP13.18□□□□□ -0.3
CECR3-201ENST00000428828 MKRN1Q9UHC7 482 aaKnown RBP13.18□□□□□ -0.3
CECR3-201ENST00000428828 CNTNAP1P78357 1384 aa13.18□□□□□ -0.3
CECR3-201ENST00000428828 ZNF213O14771 459 aa13.17□□□□□ -0.3
CECR3-201ENST00000428828 ZMYM6O95789 1325 aa13.17□□□□□ -0.3
CECR3-201ENST00000428828 TNNT1P13805 278 aa13.17□□□□□ -0.3
CECR3-201ENST00000428828 TNNT3P45378 269 aaPredicted RBP13.17□□□□□ -0.3
CECR3-201ENST00000428828 PPARAQ07869 468 aa13.17□□□□□ -0.3
CECR3-201ENST00000428828 NECTIN1Q15223 517 aa13.17□□□□□ -0.3
CECR3-201ENST00000428828 ALX1Q15699 326 aa13.17□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms