RNA–Protein interactions for RNA: ENST00000428361.5

CTDSP1-202, Transcript of CTD small phosphatase 1, humanhuman

TSL 5

Gene CTDSP1, Length 842 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSP1-202ENST00000428361 FRMD4AQ9P2Q2 1039 aaPredicted RBP18.77■□□□□ 0.6
CTDSP1-202ENST00000428361 SERPINB13Q9UIV8 391 aa18.77■□□□□ 0.6
CTDSP1-202ENST00000428361 MGAMO43451 1857 aa18.77■□□□□ 0.6
CTDSP1-202ENST00000428361 CDK5RAP2Q96SN8 1893 aa18.76■□□□□ 0.59
CTDSP1-202ENST00000428361 DYNLL1P63167 89 aaKnown RBP18.76■□□□□ 0.59
CTDSP1-202ENST00000428361 MTMR2Q13614 643 aa18.76■□□□□ 0.59
CTDSP1-202ENST00000428361 CRNKL1Q9BZJ0 848 aaKnown RBP18.76■□□□□ 0.59
CTDSP1-202ENST00000428361 SAP30BPQ9UHR5 308 aaKnown RBP18.76■□□□□ 0.59
CTDSP1-202ENST00000428361 TAOK2Q9UL54 1235 aa18.76■□□□□ 0.59
CTDSP1-202ENST00000428361 ZBTB21Q9ULJ3 1066 aa18.76■□□□□ 0.59
CTDSP1-202ENST00000428361 MYO5AQ9Y4I1 1855 aaKnown RBP18.75■□□□□ 0.59
CTDSP1-202ENST00000428361 MAGEB6P1A0A0J9YX57 407 aa18.75■□□□□ 0.59
CTDSP1-202ENST00000428361 MYCP01106 439 aaPredicted RBP18.75■□□□□ 0.59
CTDSP1-202ENST00000428361 SLC9C2Q5TAH2 1124 aa18.75■□□□□ 0.59
CTDSP1-202ENST00000428361 ASCC2Q9H1I8 757 aaPredicted RBP18.75■□□□□ 0.59
CTDSP1-202ENST00000428361 ANTXR1Q9H6X2 564 aa18.75■□□□□ 0.59
CTDSP1-202ENST00000428361 APBB1O00213 710 aa18.74■□□□□ 0.59
CTDSP1-202ENST00000428361 ADCY3O60266 1144 aa18.74■□□□□ 0.59
CTDSP1-202ENST00000428361 GJB1P08034 283 aa18.74■□□□□ 0.59
CTDSP1-202ENST00000428361 HOXA7P31268 230 aaPredicted RBP18.74■□□□□ 0.59
CTDSP1-202ENST00000428361 FLT3LGP49771 235 aa18.74■□□□□ 0.59
CTDSP1-202ENST00000428361 RRP1BQ14684 758 aaKnown RBP18.74■□□□□ 0.59
CTDSP1-202ENST00000428361 DDX24Q9GZR7 859 aaKnown RBP eCLIP18.74■□□□□ 0.59
CTDSP1-202ENST00000428361 RNF208Q9H0X6 261 aa18.74■□□□□ 0.59
CTDSP1-202ENST00000428361 DNAJC18Q9H819 358 aa18.74■□□□□ 0.59
CTDSP1-202ENST00000428361 CABP5Q9NP86 173 aa18.74■□□□□ 0.59
CTDSP1-202ENST00000428361 MYH1P12882 1939 aa18.74■□□□□ 0.59
CTDSP1-202ENST00000428361 SIPA1L1O43166 1804 aa18.74■□□□□ 0.59
CTDSP1-202ENST00000428361 GDF11O95390 407 aa18.73■□□□□ 0.59
CTDSP1-202ENST00000428361 POLR3DP05423 398 aaPredicted RBP18.73■□□□□ 0.59
CTDSP1-202ENST00000428361 CCL5P13501 91 aa18.73■□□□□ 0.59
CTDSP1-202ENST00000428361 GJA8P48165 433 aa18.73■□□□□ 0.59
CTDSP1-202ENST00000428361 USP14P54578 494 aa18.73■□□□□ 0.59
CTDSP1-202ENST00000428361 TATDN1Q6P1N9 297 aa18.73■□□□□ 0.59
CTDSP1-202ENST00000428361 USP17L2Q6R6M4 530 aa18.73■□□□□ 0.59
CTDSP1-202ENST00000428361 DNAJC2Q99543 621 aaKnown RBP18.73■□□□□ 0.59
CTDSP1-202ENST00000428361 GOLIM4O00461 696 aa18.72■□□□□ 0.59
CTDSP1-202ENST00000428361 PDE6AP16499 860 aa18.72■□□□□ 0.59
CTDSP1-202ENST00000428361 MTFR1Q15390 333 aa18.72■□□□□ 0.59
CTDSP1-202ENST00000428361 CERKLQ49MI3 558 aaPredicted RBP18.72■□□□□ 0.59
CTDSP1-202ENST00000428361 FEZ1Q99689 392 aa18.72■□□□□ 0.59
CTDSP1-202ENST00000428361 RIOK1Q9BRS2 568 aaKnown RBP18.72■□□□□ 0.59
CTDSP1-202ENST00000428361 MORF4L1Q9UBU8 362 aa18.72■□□□□ 0.59
CTDSP1-202ENST00000428361 GABRQQ9UN88 632 aa18.72■□□□□ 0.59
CTDSP1-202ENST00000428361 NDUFB9Q9Y6M9 179 aa18.72■□□□□ 0.59
CTDSP1-202ENST00000428361 GH2P01242 217 aa18.71■□□□□ 0.59
CTDSP1-202ENST00000428361 CCAR1Q8IX12 1150 aaKnown RBP18.71■□□□□ 0.59
CTDSP1-202ENST00000428361 SIRT2Q8IXJ6 389 aa18.71■□□□□ 0.59
CTDSP1-202ENST00000428361 AMOTL1Q8IY63 956 aa18.71■□□□□ 0.59
CTDSP1-202ENST00000428361 LRRCC1Q9C099 1032 aa18.71■□□□□ 0.59
CTDSP1-202ENST00000428361 BRCA2P51587 3418 aa18.71■□□□□ 0.59
CTDSP1-202ENST00000428361 ATP5JP18859 108 aa18.7■□□□□ 0.58
CTDSP1-202ENST00000428361 ABCB5Q2M3G0 1257 aa18.7■□□□□ 0.58
CTDSP1-202ENST00000428361 ZSCAN25Q6NSZ9 544 aa18.7■□□□□ 0.58
CTDSP1-202ENST00000428361 SOCS4Q8WXH5 440 aa18.7■□□□□ 0.58
CTDSP1-202ENST00000428361 DDRGK1Q96HY6 314 aa18.7■□□□□ 0.58
CTDSP1-202ENST00000428361 HTATIP2Q9BUP3 242 aa18.7■□□□□ 0.58
CTDSP1-202ENST00000428361 PAG1Q9NWQ8 432 aa18.7■□□□□ 0.58
CTDSP1-202ENST00000428361 ZNF532Q9HCE3 1301 aa18.7■□□□□ 0.58
CTDSP1-202ENST00000428361 MKI67P46013 3256 aaKnown RBP18.69■□□□□ 0.58
CTDSP1-202ENST00000428361 INHAP05111 366 aa18.69■□□□□ 0.58
CTDSP1-202ENST00000428361 HERVK_113P62684 666 aa18.69■□□□□ 0.58
CTDSP1-202ENST00000428361 GPRC5AQ8NFJ5 357 aa18.69■□□□□ 0.58
CTDSP1-202ENST00000428361 GPATCH3Q96I76 525 aa18.69■□□□□ 0.58
CTDSP1-202ENST00000428361 C12orf42Q96LP6 360 aa18.69■□□□□ 0.58
CTDSP1-202ENST00000428361 MCM9Q9NXL9 1143 aa18.69■□□□□ 0.58
CTDSP1-202ENST00000428361 HMGCRP04035 888 aa18.68■□□□□ 0.58
CTDSP1-202ENST00000428361 MAPK4P31152 587 aa18.68■□□□□ 0.58
CTDSP1-202ENST00000428361 RAB3GAP1Q15042 981 aa18.68■□□□□ 0.58
CTDSP1-202ENST00000428361 TRMT44Q8IYL2 757 aaKnown RBP18.68■□□□□ 0.58
CTDSP1-202ENST00000428361 U2AF1L4Q8WU68 220 aaKnown RBP18.68■□□□□ 0.58
CTDSP1-202ENST00000428361 HAUS7Q99871 368 aa18.68■□□□□ 0.58
CTDSP1-202ENST00000428361 BCL11AQ9H165 835 aa18.68■□□□□ 0.58
CTDSP1-202ENST00000428361 SWAP70Q9UH65 585 aa18.68■□□□□ 0.58
CTDSP1-202ENST00000428361 NAV1Q8NEY1 1877 aa18.67■□□□□ 0.58
CTDSP1-202ENST00000428361 USP17L15C9J2P7 530 aa18.67■□□□□ 0.58
CTDSP1-202ENST00000428361 USP17L13C9JLJ4 530 aa18.67■□□□□ 0.58
CTDSP1-202ENST00000428361 USP17L11C9JVI0 530 aa18.67■□□□□ 0.58
CTDSP1-202ENST00000428361 USP17L18D6R9N7 530 aa18.67■□□□□ 0.58
CTDSP1-202ENST00000428361 USP17L22D6RA61 530 aa18.67■□□□□ 0.58
CTDSP1-202ENST00000428361 USP17L17D6RBQ6 530 aa18.67■□□□□ 0.58
CTDSP1-202ENST00000428361 USP17L19D6RCP7 530 aa18.67■□□□□ 0.58
CTDSP1-202ENST00000428361 USP17L20D6RJB6 530 aa18.67■□□□□ 0.58
CTDSP1-202ENST00000428361 ELNP15502 786 aa18.67■□□□□ 0.58
CTDSP1-202ENST00000428361 CCNA1P78396 465 aa18.67■□□□□ 0.58
CTDSP1-202ENST00000428361 USP17L24Q0WX57 530 aa18.67■□□□□ 0.58
CTDSP1-202ENST00000428361 P2RX7Q99572 595 aaKnown RBP18.67■□□□□ 0.58
CTDSP1-202ENST00000428361 KIAA1683Q9H0B3 1180 aa18.67■□□□□ 0.58
CTDSP1-202ENST00000428361 BOLA2Q9H3K6 86 aa18.67■□□□□ 0.58
CTDSP1-202ENST00000428361 CWC22Q9HCG8 908 aaKnown RBP18.67■□□□□ 0.58
CTDSP1-202ENST00000428361 ATP8A2Q9NTI2 1148 aa18.67■□□□□ 0.58
CTDSP1-202ENST00000428361 TCRBV5S4A2TA0A5A2 114 aa18.66■□□□□ 0.58
CTDSP1-202ENST00000428361 GLRX3O76003 335 aaKnown RBP18.66■□□□□ 0.58
CTDSP1-202ENST00000428361 SGPL1O95470 568 aa18.66■□□□□ 0.58
CTDSP1-202ENST00000428361 ADD2P35612 726 aa18.66■□□□□ 0.58
CTDSP1-202ENST00000428361 JAG1P78504 1218 aa18.66■□□□□ 0.58
CTDSP1-202ENST00000428361 SHISA4Q96DD7 197 aa18.66■□□□□ 0.58
CTDSP1-202ENST00000428361 NUDT12Q9BQG2 462 aa18.66■□□□□ 0.58
CTDSP1-202ENST00000428361 UNC93B1Q9H1C4 597 aa18.66■□□□□ 0.58
CTDSP1-202ENST00000428361 EMILIN3Q9NT22 766 aa18.66■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 11.2 ms