RNA–Protein interactions for RNA: ENST00000428154.5

PMPCB-202, Transcript of peptidase, mitochondrial processing beta subunit, humanhuman

TSL 1 (best) BASIC

Gene PMPCB, Length 1,714 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMPCB-202ENST00000428154 DDX52Q9Y2R4 599 aaKnown RBP eCLIP23.11■■□□□ 1.29
PMPCB-202ENST00000428154 MYH2Q9UKX2 1941 aa23.11■■□□□ 1.29
PMPCB-202ENST00000428154 TAF1P21675 1872 aa23.11■■□□□ 1.29
PMPCB-202ENST00000428154 GUCY1A2P33402 732 aa23.11■■□□□ 1.29
PMPCB-202ENST00000428154 KCNJ6P48051 423 aa23.11■■□□□ 1.29
PMPCB-202ENST00000428154 LRMPQ12912 555 aa23.11■■□□□ 1.29
PMPCB-202ENST00000428154 BICDL1Q6ZP65 573 aa23.11■■□□□ 1.29
PMPCB-202ENST00000428154 DACH1Q9UI36 760 aa23.11■■□□□ 1.29
PMPCB-202ENST00000428154 FBXO2Q9UK22 296 aaPredicted RBP23.11■■□□□ 1.29
PMPCB-202ENST00000428154 PAXBP1Q9Y5B6 917 aa23.11■■□□□ 1.29
PMPCB-202ENST00000428154 THSD7AQ9UPZ6 1657 aa23.1■■□□□ 1.29
PMPCB-202ENST00000428154 TOB1P50616 345 aaPredicted RBP23.1■■□□□ 1.29
PMPCB-202ENST00000428154 NCAPHQ15003 741 aa23.1■■□□□ 1.29
PMPCB-202ENST00000428154 CT47A1Q5JQC4 288 aaPredicted RBP23.1■■□□□ 1.29
PMPCB-202ENST00000428154 TRIML1Q8N9V2 468 aa23.1■■□□□ 1.29
PMPCB-202ENST00000428154 BAZ2AQ9UIF9 1905 aaKnown RBP23.09■■□□□ 1.29
PMPCB-202ENST00000428154 KRT2P35908 639 aa23.09■■□□□ 1.29
PMPCB-202ENST00000428154 DYNLL1P63167 89 aaKnown RBP23.09■■□□□ 1.29
PMPCB-202ENST00000428154 MYL5Q02045 173 aa23.09■■□□□ 1.29
PMPCB-202ENST00000428154 MECOMQ03112 1051 aa23.09■■□□□ 1.29
PMPCB-202ENST00000428154 PDE4BQ07343 736 aa23.09■■□□□ 1.29
PMPCB-202ENST00000428154 CCDC178Q5BJE1 867 aa23.09■■□□□ 1.29
PMPCB-202ENST00000428154 CERS3Q8IU89 383 aa23.09■■□□□ 1.29
PMPCB-202ENST00000428154 STK11IPQ8N1F8 1099 aa23.09■■□□□ 1.29
PMPCB-202ENST00000428154 ERCC4Q92889 916 aaPredicted RBP23.09■■□□□ 1.29
PMPCB-202ENST00000428154 LEMD3Q9Y2U8 911 aa23.09■■□□□ 1.29
PMPCB-202ENST00000428154 KIF2AO00139 706 aaPredicted RBP23.08■■□□□ 1.29
PMPCB-202ENST00000428154 GNPATO15228 680 aa23.08■■□□□ 1.29
PMPCB-202ENST00000428154 FUT2Q10981 343 aa23.08■■□□□ 1.29
PMPCB-202ENST00000428154 TROAPQ12815 778 aa23.08■■□□□ 1.29
PMPCB-202ENST00000428154 PHF20Q9BVI0 1012 aa23.08■■□□□ 1.29
PMPCB-202ENST00000428154 KCNJ14Q9UNX9 436 aa23.08■■□□□ 1.29
PMPCB-202ENST00000428154 LY75O60449 1722 aa23.08■■□□□ 1.29
PMPCB-202ENST00000428154 NT5DC1Q5TFE4 455 aa23.08■■□□□ 1.28
PMPCB-202ENST00000428154 WDR66Q8TBY9 1149 aa23.08■■□□□ 1.28
PMPCB-202ENST00000428154 ZNF384Q8TF68 577 aa23.08■■□□□ 1.28
PMPCB-202ENST00000428154 CLIC6Q96NY7 704 aa23.08■■□□□ 1.28
PMPCB-202ENST00000428154 DCP1AQ9NPI6 582 aaPredicted RBP23.08■■□□□ 1.28
PMPCB-202ENST00000428154 CCNL1Q9UK58 526 aaPredicted RBP23.08■■□□□ 1.28
PMPCB-202ENST00000428154 TAF1LQ8IZX4 1826 aa23.07■■□□□ 1.28
PMPCB-202ENST00000428154 TRIM75PA6NK02 468 aa23.07■■□□□ 1.28
PMPCB-202ENST00000428154 USP17L12C9JPN9 530 aa23.07■■□□□ 1.28
PMPCB-202ENST00000428154 USP17L21D6R901 530 aa23.07■■□□□ 1.28
PMPCB-202ENST00000428154 TUBB4AP04350 444 aa23.07■■□□□ 1.28
PMPCB-202ENST00000428154 SKILP12757 684 aa23.07■■□□□ 1.28
PMPCB-202ENST00000428154 CTCFLQ8NI51 663 aaPredicted RBP23.07■■□□□ 1.28
PMPCB-202ENST00000428154 BIN1O00499 593 aa23.06■■□□□ 1.28
PMPCB-202ENST00000428154 LONRF3Q496Y0 759 aa23.06■■□□□ 1.28
PMPCB-202ENST00000428154 TMTC3Q6ZXV5 915 aa23.06■■□□□ 1.28
PMPCB-202ENST00000428154 METTL16Q86W50 562 aaKnown RBP23.06■■□□□ 1.28
PMPCB-202ENST00000428154 FERMT2Q96AC1 680 aa23.06■■□□□ 1.28
PMPCB-202ENST00000428154 C8orf37Q96NL8 207 aa23.06■■□□□ 1.28
PMPCB-202ENST00000428154 AATFQ9NY61 560 aaKnown RBP eCLIP23.06■■□□□ 1.28
PMPCB-202ENST00000428154 SMC2O95347 1197 aa23.05■■□□□ 1.28
PMPCB-202ENST00000428154 TM4SF1P30408 202 aa23.05■■□□□ 1.28
PMPCB-202ENST00000428154 PIP4K2BP78356 416 aa23.05■■□□□ 1.28
PMPCB-202ENST00000428154 GSTO1P78417 241 aa23.05■■□□□ 1.28
PMPCB-202ENST00000428154 MDM2Q00987 491 aaPredicted RBP23.05■■□□□ 1.28
PMPCB-202ENST00000428154 PKN1Q16512 942 aa23.05■■□□□ 1.28
PMPCB-202ENST00000428154 TPD52L1Q16890 204 aaPredicted RBP23.05■■□□□ 1.28
PMPCB-202ENST00000428154 C15orf52Q6ZUT6 534 aaKnown RBP23.05■■□□□ 1.28
PMPCB-202ENST00000428154 FILIP1Q7Z7B0 1213 aa23.05■■□□□ 1.28
PMPCB-202ENST00000428154 MLKLQ8NB16 471 aa23.05■■□□□ 1.28
PMPCB-202ENST00000428154 XPO4Q9C0E2 1151 aaKnown RBP23.05■■□□□ 1.28
PMPCB-202ENST00000428154 IFNKQ9P0W0 207 aa23.05■■□□□ 1.28
PMPCB-202ENST00000428154 IRS2Q9Y4H2 1338 aa23.05■■□□□ 1.28
PMPCB-202ENST00000428154 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP23.05■■□□□ 1.28
PMPCB-202ENST00000428154 CCZ1BP86790 482 aa23.05■■□□□ 1.28
PMPCB-202ENST00000428154 CCZ1P86791 482 aaPredicted RBP23.05■■□□□ 1.28
PMPCB-202ENST00000428154 SYCP1Q15431 976 aa23.05■■□□□ 1.28
PMPCB-202ENST00000428154 PYM1Q9BRP8 204 aaKnown RBP23.05■■□□□ 1.28
PMPCB-202ENST00000428154 SRP68Q9UHB9 627 aaKnown RBP23.05■■□□□ 1.28
PMPCB-202ENST00000428154 SPATA31A6Q5VVP1 1343 aa23.04■■□□□ 1.28
PMPCB-202ENST00000428154 A0A087WWV3 80 aa23.04■■□□□ 1.28
PMPCB-202ENST00000428154 UBE2Q2LH0YL09 131 aa23.04■■□□□ 1.28
PMPCB-202ENST00000428154 TNNT1P13805 278 aa23.04■■□□□ 1.28
PMPCB-202ENST00000428154 ADRA2BP18089 450 aa23.04■■□□□ 1.28
PMPCB-202ENST00000428154 KIF5BP33176 963 aa23.04■■□□□ 1.28
PMPCB-202ENST00000428154 TRAPPC10P48553 1259 aa23.04■■□□□ 1.28
PMPCB-202ENST00000428154 FANCCQ00597 558 aa23.04■■□□□ 1.28
PMPCB-202ENST00000428154 PNOCQ13519 176 aa23.04■■□□□ 1.28
PMPCB-202ENST00000428154 POSTNQ15063 836 aa23.04■■□□□ 1.28
PMPCB-202ENST00000428154 FAM177A1Q8N128 213 aaPredicted RBP23.04■■□□□ 1.28
PMPCB-202ENST00000428154 CABP5Q9NP86 173 aa23.04■■□□□ 1.28
PMPCB-202ENST00000428154 PCDHA5Q9Y5H7 936 aa23.04■■□□□ 1.28
PMPCB-202ENST00000428154 NR5A1Q13285 461 aa23.03■■□□□ 1.28
PMPCB-202ENST00000428154 CCDC82Q8N4S0 544 aa23.03■■□□□ 1.28
PMPCB-202ENST00000428154 ARHGEF1Q92888 912 aaKnown RBP23.03■■□□□ 1.28
PMPCB-202ENST00000428154 FBXW7Q969H0 707 aa23.03■■□□□ 1.28
PMPCB-202ENST00000428154 PCDHB6Q9Y5E3 794 aa23.03■■□□□ 1.28
PMPCB-202ENST00000428154 CCP110O43303 1012 aa23.02■■□□□ 1.28
PMPCB-202ENST00000428154 LDHCP07864 332 aa23.02■■□□□ 1.28
PMPCB-202ENST00000428154 SARSP49591 514 aaKnown RBP23.02■■□□□ 1.28
PMPCB-202ENST00000428154 GRAPQ13588 217 aa23.02■■□□□ 1.28
PMPCB-202ENST00000428154 DZIP1Q86YF9 867 aaKnown RBP23.02■■□□□ 1.28
PMPCB-202ENST00000428154 AMOTL1Q8IY63 956 aa23.02■■□□□ 1.28
PMPCB-202ENST00000428154 CCDC112Q8NEF3 446 aa23.02■■□□□ 1.28
PMPCB-202ENST00000428154 GRAPLQ8TC17 118 aaPredicted RBP23.02■■□□□ 1.28
PMPCB-202ENST00000428154 ANKS1AQ92625 1134 aa23.02■■□□□ 1.28
PMPCB-202ENST00000428154 SFPQP23246 707 aaKnown RBP eCLIP23.02■■□□□ 1.28
Retrieved 100 of 20,778 RNA–protein pairs in 10.9 ms