RNA–Protein interactions for RNA: ENST00000428135.7

SNX13-203, Transcript of sorting nexin 13, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNX13, Length 6,357 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX13-203ENST00000428135 USP6P35125 1406 aa10.92□□□□□ -0.66
SNX13-203ENST00000428135 E7EWF7 191 aa10.92□□□□□ -0.66
SNX13-203ENST00000428135 EPB41P11171 864 aaKnown RBP10.92□□□□□ -0.66
SNX13-203ENST00000428135 TRPC3Q13507 836 aa10.92□□□□□ -0.66
SNX13-203ENST00000428135 CALCRLQ16602 461 aa10.92□□□□□ -0.66
SNX13-203ENST00000428135 PPEF1O14829 653 aaPredicted RBP10.91□□□□□ -0.66
SNX13-203ENST00000428135 GCNT3O95395 438 aa10.91□□□□□ -0.66
SNX13-203ENST00000428135 PHKA1P46020 1223 aa10.91□□□□□ -0.66
SNX13-203ENST00000428135 SMTNP53814 917 aa10.91□□□□□ -0.66
SNX13-203ENST00000428135 PPP2R5DQ14738 602 aa10.91□□□□□ -0.66
SNX13-203ENST00000428135 BRDTQ58F21 947 aaPredicted RBP10.91□□□□□ -0.66
SNX13-203ENST00000428135 WDR44Q5JSH3 913 aa10.91□□□□□ -0.66
SNX13-203ENST00000428135 SULF1Q8IWU6 871 aa10.91□□□□□ -0.66
SNX13-203ENST00000428135 ZBTB38Q8NAP3 1195 aaPredicted RBP10.91□□□□□ -0.66
SNX13-203ENST00000428135 IFT81Q8WYA0 676 aa10.91□□□□□ -0.66
SNX13-203ENST00000428135 THRAP3Q9Y2W1 955 aaKnown RBP10.91□□□□□ -0.66
SNX13-203ENST00000428135 ATP6V0A2Q9Y487 856 aa10.91□□□□□ -0.66
SNX13-203ENST00000428135 UTP14CQ5TAP6 766 aaKnown RBP10.91□□□□□ -0.66
SNX13-203ENST00000428135 ANO1Q5XXA6 986 aa10.91□□□□□ -0.66
SNX13-203ENST00000428135 A2ML1A8K2U0 1454 aa10.91□□□□□ -0.66
SNX13-203ENST00000428135 PALLDQ8WX93 1383 aa10.91□□□□□ -0.66
SNX13-203ENST00000428135 A0A0D9SFI3 127 aa10.91□□□□□ -0.66
SNX13-203ENST00000428135 HERC4Q5GLZ8 1057 aaPredicted RBP10.91□□□□□ -0.66
SNX13-203ENST00000428135 ZNF569Q5MCW4 686 aa10.91□□□□□ -0.66
SNX13-203ENST00000428135 ARHGEF16Q5VV41 709 aa10.91□□□□□ -0.66
SNX13-203ENST00000428135 INSRP06213 1382 aa10.91□□□□□ -0.66
SNX13-203ENST00000428135 MCM6Q14566 821 aa10.91□□□□□ -0.66
SNX13-203ENST00000428135 ABT1Q9ULW3 272 aaKnown RBP10.91□□□□□ -0.66
SNX13-203ENST00000428135 RAD50Q92878 1312 aa10.91□□□□□ -0.66
SNX13-203ENST00000428135 NEMFO60524 1076 aa10.91□□□□□ -0.66
SNX13-203ENST00000428135 KIF5AQ12840 1032 aa10.91□□□□□ -0.66
SNX13-203ENST00000428135 LRWD1Q9UFC0 647 aa10.91□□□□□ -0.66
SNX13-203ENST00000428135 Q3C1V9 767 aa10.9□□□□□ -0.66
SNX13-203ENST00000428135 CDC37L1Q7L3B6 337 aa10.9□□□□□ -0.66
SNX13-203ENST00000428135 SELENOOQ9BVL4 669 aa10.9□□□□□ -0.66
SNX13-203ENST00000428135 USP44Q9H0E7 712 aa10.9□□□□□ -0.66
SNX13-203ENST00000428135 SMCO2A6NFE2 343 aa10.9□□□□□ -0.66
SNX13-203ENST00000428135 SPAG1Q07617 926 aa10.9□□□□□ -0.66
SNX13-203ENST00000428135 CERKLQ49MI3 558 aaPredicted RBP10.9□□□□□ -0.66
SNX13-203ENST00000428135 BEND3Q5T5X7 828 aa10.9□□□□□ -0.66
SNX13-203ENST00000428135 EAF2Q96CJ1 260 aaPredicted RBP10.9□□□□□ -0.66
SNX13-203ENST00000428135 KIF1BO60333 1816 aa10.9□□□□□ -0.66
SNX13-203ENST00000428135 TACC1O75410 805 aa10.9□□□□□ -0.66
SNX13-203ENST00000428135 PTH1RQ03431 593 aa10.9□□□□□ -0.66
SNX13-203ENST00000428135 IFRD2Q12894 506 aaPredicted RBP10.9□□□□□ -0.66
SNX13-203ENST00000428135 DNAJC21Q5F1R6 531 aaKnown RBP10.9□□□□□ -0.66
SNX13-203ENST00000428135 MIGA2Q7L4E1 593 aa10.9□□□□□ -0.66
SNX13-203ENST00000428135 GTPBP4Q9BZE4 634 aaKnown RBP10.9□□□□□ -0.66
SNX13-203ENST00000428135 KCNH3Q9ULD8 1083 aa10.9□□□□□ -0.66
SNX13-203ENST00000428135 SGSM2O43147 1006 aa10.9□□□□□ -0.66
SNX13-203ENST00000428135 RHOXF2BP0C7M4 288 aa10.9□□□□□ -0.66
SNX13-203ENST00000428135 LEO1Q8WVC0 666 aaPredicted RBP10.9□□□□□ -0.66
SNX13-203ENST00000428135 RHOXF2Q9BQY4 288 aa10.9□□□□□ -0.66
SNX13-203ENST00000428135 MAK16Q9BXY0 300 aaKnown RBP10.9□□□□□ -0.66
SNX13-203ENST00000428135 NACA2Q9H009 215 aa10.9□□□□□ -0.66
SNX13-203ENST00000428135 MRPL44Q9H9J2 332 aaKnown RBP10.9□□□□□ -0.66
SNX13-203ENST00000428135 TLR7Q9NYK1 1049 aaKnown RBP10.9□□□□□ -0.66
SNX13-203ENST00000428135 TRPC6Q9Y210 931 aa10.9□□□□□ -0.66
SNX13-203ENST00000428135 USTQ9Y2C2 406 aa10.9□□□□□ -0.66
SNX13-203ENST00000428135 JCADQ9P266 1359 aa10.9□□□□□ -0.66
SNX13-203ENST00000428135 CLTCQ00610 1675 aaKnown RBP10.9□□□□□ -0.66
SNX13-203ENST00000428135 NONOQ15233 471 aaKnown RBP eCLIP10.9□□□□□ -0.67
SNX13-203ENST00000428135 DALRD3Q5D0E6 543 aaKnown RBP10.9□□□□□ -0.67
SNX13-203ENST00000428135 CNKSR1Q969H4 720 aa10.9□□□□□ -0.67
SNX13-203ENST00000428135 MLXIPQ9HAP2 919 aa10.9□□□□□ -0.67
SNX13-203ENST00000428135 CLASP1Q7Z460 1538 aa10.9□□□□□ -0.67
SNX13-203ENST00000428135 PTPRMP28827 1452 aa10.9□□□□□ -0.67
SNX13-203ENST00000428135 FLOT1O75955 427 aa10.89□□□□□ -0.67
SNX13-203ENST00000428135 GDF11O95390 407 aa10.89□□□□□ -0.67
SNX13-203ENST00000428135 MCM3P25205 808 aa10.89□□□□□ -0.67
SNX13-203ENST00000428135 PRR16Q569H4 304 aa10.89□□□□□ -0.67
SNX13-203ENST00000428135 AGTPBP1Q9UPW5 1226 aa10.89□□□□□ -0.67
SNX13-203ENST00000428135 TTLL3Q9Y4R7 772 aa10.89□□□□□ -0.67
SNX13-203ENST00000428135 ABL1P00519 1130 aa10.89□□□□□ -0.67
SNX13-203ENST00000428135 CCDC175P0C221 793 aa10.89□□□□□ -0.67
SNX13-203ENST00000428135 GTF2F1P35269 517 aaKnown RBP eCLIP10.89□□□□□ -0.67
SNX13-203ENST00000428135 DYNLL1P63167 89 aaKnown RBP10.89□□□□□ -0.67
SNX13-203ENST00000428135 KRT40Q6A162 431 aa10.89□□□□□ -0.67
SNX13-203ENST00000428135 PLVAPQ9BX97 442 aa10.89□□□□□ -0.67
SNX13-203ENST00000428135 UAP1Q16222 522 aaPredicted RBP10.89□□□□□ -0.67
SNX13-203ENST00000428135 TXNRD1Q16881 649 aa10.89□□□□□ -0.67
SNX13-203ENST00000428135 FAM102BQ5T8I3 360 aa10.89□□□□□ -0.67
SNX13-203ENST00000428135 APBB1IPQ7Z5R6 666 aaPredicted RBP10.89□□□□□ -0.67
SNX13-203ENST00000428135 TRMT44Q8IYL2 757 aaKnown RBP10.89□□□□□ -0.67
SNX13-203ENST00000428135 MAP3K15Q6ZN16 1313 aa10.89□□□□□ -0.67
SNX13-203ENST00000428135 CDC42BPAQ5VT25 1732 aa10.89□□□□□ -0.67
SNX13-203ENST00000428135 TLDC2A0PJX2 215 aa10.89□□□□□ -0.67
SNX13-203ENST00000428135 HSF2BPO75031 334 aa10.89□□□□□ -0.67
SNX13-203ENST00000428135 STAMBPO95630 424 aa10.89□□□□□ -0.67
SNX13-203ENST00000428135 TBC1D8BQ0IIM8 1120 aa10.89□□□□□ -0.67
SNX13-203ENST00000428135 PPP1R21Q6ZMI0 780 aa10.89□□□□□ -0.67
SNX13-203ENST00000428135 SESTD1Q86VW0 696 aa10.89□□□□□ -0.67
SNX13-203ENST00000428135 ANKRD35Q8N283 1001 aa10.89□□□□□ -0.67
SNX13-203ENST00000428135 TBC1D22AQ8WUA7 517 aa10.89□□□□□ -0.67
SNX13-203ENST00000428135 ZNF804BA4D1E1 1349 aa10.89□□□□□ -0.67
SNX13-203ENST00000428135 ELP1O95163 1332 aa10.89□□□□□ -0.67
SNX13-203ENST00000428135 HOXB7P09629 217 aa10.89□□□□□ -0.67
SNX13-203ENST00000428135 IFNL3Q8IZI9 196 aa10.89□□□□□ -0.67
SNX13-203ENST00000428135 PSMB7Q99436 277 aa10.89□□□□□ -0.67
SNX13-203ENST00000428135 PLEKHA4Q9H4M7 779 aa10.89□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 9.6 ms