RNA–Protein interactions for RNA: ENST00000428017.5

VARS2-203, Transcript of valyl-tRNA synthetase 2, mitochondrial, humanhuman

TSL 2

Gene VARS2, Length 1,103 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS2-203ENST00000428017 RASSF10A6NK89 507 aa17.95■□□□□ 0.46
VARS2-203ENST00000428017 GRM1Q13255 1194 aa17.95■□□□□ 0.46
VARS2-203ENST00000428017 DEFB115Q30KQ5 88 aa17.95■□□□□ 0.46
VARS2-203ENST00000428017 RRP12Q5JTH9 1297 aaKnown RBP17.95■□□□□ 0.46
VARS2-203ENST00000428017 CCDC102AQ96A19 550 aa17.95■□□□□ 0.46
VARS2-203ENST00000428017 TRPM7Q96QT4 1865 aa17.95■□□□□ 0.46
VARS2-203ENST00000428017 RANBP6O60518 1105 aaKnown RBP17.94■□□□□ 0.46
VARS2-203ENST00000428017 GH2P01242 217 aa17.94■□□□□ 0.46
VARS2-203ENST00000428017 ECE1P42892 770 aa17.94■□□□□ 0.46
VARS2-203ENST00000428017 TRDNQ13061 729 aa17.94■□□□□ 0.46
VARS2-203ENST00000428017 RAB3GAP1Q15042 981 aa17.94■□□□□ 0.46
VARS2-203ENST00000428017 ERO1BQ86YB8 467 aa17.94■□□□□ 0.46
VARS2-203ENST00000428017 TBC1D10CQ8IV04 446 aa17.94■□□□□ 0.46
VARS2-203ENST00000428017 STAG1Q8WVM7 1258 aa17.94■□□□□ 0.46
VARS2-203ENST00000428017 CNNM2Q9H8M5 875 aa17.94■□□□□ 0.46
VARS2-203ENST00000428017 ZBTB21Q9ULJ3 1066 aa17.94■□□□□ 0.46
VARS2-203ENST00000428017 SNCAIPQ9Y6H5 919 aa17.94■□□□□ 0.46
VARS2-203ENST00000428017 EPB41L2O43491 1005 aaKnown RBP17.93■□□□□ 0.46
VARS2-203ENST00000428017 CYP21A2P08686 494 aa17.93■□□□□ 0.46
VARS2-203ENST00000428017 TSPY3P0CV98 308 aa17.93■□□□□ 0.46
VARS2-203ENST00000428017 TSPY8P0CW00 308 aa17.93■□□□□ 0.46
VARS2-203ENST00000428017 ZKSCAN1P17029 563 aaPredicted RBP17.93■□□□□ 0.46
VARS2-203ENST00000428017 RASA1P20936 1047 aa17.93■□□□□ 0.46
VARS2-203ENST00000428017 MCCP23508 829 aa17.93■□□□□ 0.46
VARS2-203ENST00000428017 HTRA3P83110 453 aa17.93■□□□□ 0.46
VARS2-203ENST00000428017 RRP1BQ14684 758 aaKnown RBP17.93■□□□□ 0.46
VARS2-203ENST00000428017 TMEM179Q6ZVK1 233 aa17.93■□□□□ 0.46
VARS2-203ENST00000428017 OPTNQ96CV9 577 aa17.93■□□□□ 0.46
VARS2-203ENST00000428017 OTUD5Q96G74 571 aa17.93■□□□□ 0.46
VARS2-203ENST00000428017 AS3MTQ9HBK9 375 aa17.93■□□□□ 0.46
VARS2-203ENST00000428017 BAZ2AQ9UIF9 1905 aaKnown RBP17.93■□□□□ 0.46
VARS2-203ENST00000428017 SPDYE5A6NIY4 337 aa17.92■□□□□ 0.46
VARS2-203ENST00000428017 TSPY2A6NKD2 308 aa17.92■□□□□ 0.46
VARS2-203ENST00000428017 USP17L5A8MUK1 530 aa17.92■□□□□ 0.46
VARS2-203ENST00000428017 SLC27A2O14975 620 aa17.92■□□□□ 0.46
VARS2-203ENST00000428017 ORC4O43929 436 aa17.92■□□□□ 0.46
VARS2-203ENST00000428017 AKR1B1P15121 316 aa17.92■□□□□ 0.46
VARS2-203ENST00000428017 PTPRAP18433 802 aa17.92■□□□□ 0.46
VARS2-203ENST00000428017 NT5C2P49902 561 aa17.92■□□□□ 0.46
VARS2-203ENST00000428017 PPATQ06203 517 aa17.92■□□□□ 0.46
VARS2-203ENST00000428017 NECTIN1Q15223 517 aa17.92■□□□□ 0.46
VARS2-203ENST00000428017 CREB3L3Q68CJ9 461 aa17.92■□□□□ 0.46
VARS2-203ENST00000428017 RALYLQ86SE5 291 aaKnown RBP17.92■□□□□ 0.46
VARS2-203ENST00000428017 ESR2Q92731 530 aa17.92■□□□□ 0.46
VARS2-203ENST00000428017 TBC1D2Q9BYX2 928 aa17.92■□□□□ 0.46
VARS2-203ENST00000428017 KRT23Q9C075 422 aa17.92■□□□□ 0.46
VARS2-203ENST00000428017 DDX52Q9Y2R4 599 aaKnown RBP eCLIP17.92■□□□□ 0.46
VARS2-203ENST00000428017 ZHX2Q9Y6X8 837 aa17.92■□□□□ 0.46
VARS2-203ENST00000428017 TFAP4Q01664 338 aa17.91■□□□□ 0.46
VARS2-203ENST00000428017 MKRN3Q13064 507 aaKnown RBP17.91■□□□□ 0.46
VARS2-203ENST00000428017 C8orf34Q49A92 452 aa17.91■□□□□ 0.46
VARS2-203ENST00000428017 CYP4F22Q6NT55 531 aa17.91■□□□□ 0.46
VARS2-203ENST00000428017 RASAL3Q86YV0 1011 aa17.91■□□□□ 0.46
VARS2-203ENST00000428017 WNK4Q96J92 1243 aa17.91■□□□□ 0.46
VARS2-203ENST00000428017 CAPNS2Q96L46 248 aa17.91■□□□□ 0.46
VARS2-203ENST00000428017 NBPF3Q9H094 633 aa17.91■□□□□ 0.46
VARS2-203ENST00000428017 INCENPQ9NQS7 918 aa17.91■□□□□ 0.46
VARS2-203ENST00000428017 SLC10A3P09131 477 aa17.9■□□□□ 0.46
VARS2-203ENST00000428017 FGRP09769 529 aa17.9■□□□□ 0.46
VARS2-203ENST00000428017 ZBTB48P10074 688 aaPredicted RBP17.9■□□□□ 0.46
VARS2-203ENST00000428017 PPIL2Q13356 520 aa17.9■□□□□ 0.46
VARS2-203ENST00000428017 FAM47AQ5JRC9 791 aa17.9■□□□□ 0.46
VARS2-203ENST00000428017 USP26Q9BXU7 913 aa17.9■□□□□ 0.46
VARS2-203ENST00000428017 SIPA1L1O43166 1804 aa17.9■□□□□ 0.46
VARS2-203ENST00000428017 NEDD4P46934 1319 aa17.9■□□□□ 0.46
VARS2-203ENST00000428017 LAMB1P07942 1786 aa17.89■□□□□ 0.45
VARS2-203ENST00000428017 E7EWF7 191 aa17.89■□□□□ 0.45
VARS2-203ENST00000428017 JAG1P78504 1218 aa17.89■□□□□ 0.45
VARS2-203ENST00000428017 ATP2B2Q01814 1243 aa17.89■□□□□ 0.45
VARS2-203ENST00000428017 ICA1Q05084 483 aa17.89■□□□□ 0.45
VARS2-203ENST00000428017 KRT32Q14532 448 aa17.89■□□□□ 0.45
VARS2-203ENST00000428017 SEPT2Q15019 361 aa17.89■□□□□ 0.45
VARS2-203ENST00000428017 SHROOM1Q2M3G4 852 aaPredicted RBP17.89■□□□□ 0.45
VARS2-203ENST00000428017 PPP4R3BQ5MIZ7 849 aa17.89■□□□□ 0.45
VARS2-203ENST00000428017 SPRYD7Q5W111 196 aa17.89■□□□□ 0.45
VARS2-203ENST00000428017 NCOA7Q8NI08 942 aa17.89■□□□□ 0.45
VARS2-203ENST00000428017 CNKSR2Q8WXI2 1034 aa17.89■□□□□ 0.45
VARS2-203ENST00000428017 KANSL2Q9H9L4 492 aa17.89■□□□□ 0.45
VARS2-203ENST00000428017 UPF2Q9HAU5 1272 aaKnown RBP17.89■□□□□ 0.45
VARS2-203ENST00000428017 FRMD4AQ9P2Q2 1039 aaPredicted RBP17.89■□□□□ 0.45
VARS2-203ENST00000428017 TRIM75PA6NK02 468 aa17.88■□□□□ 0.45
VARS2-203ENST00000428017 B4E1Z4 1266 aa17.88■□□□□ 0.45
VARS2-203ENST00000428017 KDM4AO75164 1064 aa17.88■□□□□ 0.45
VARS2-203ENST00000428017 HSPA4P34932 840 aa17.88■□□□□ 0.45
VARS2-203ENST00000428017 NOGQ13253 232 aa17.88■□□□□ 0.45
VARS2-203ENST00000428017 SNAPC2Q13487 334 aa17.88■□□□□ 0.45
VARS2-203ENST00000428017 CCDC84Q86UT8 332 aaPredicted RBP17.88■□□□□ 0.45
VARS2-203ENST00000428017 ZNF280CQ8ND82 737 aa17.88■□□□□ 0.45
VARS2-203ENST00000428017 NEDD1Q8NHV4 660 aa17.88■□□□□ 0.45
VARS2-203ENST00000428017 FEZ1Q99689 392 aa17.88■□□□□ 0.45
VARS2-203ENST00000428017 SH2D4AQ9H788 454 aa17.88■□□□□ 0.45
VARS2-203ENST00000428017 TACC3Q9Y6A5 838 aa17.88■□□□□ 0.45
VARS2-203ENST00000428017 CXCL11O14625 94 aa17.87■□□□□ 0.45
VARS2-203ENST00000428017 IRF6O14896 467 aa17.87■□□□□ 0.45
VARS2-203ENST00000428017 VEGFBP49765 207 aa17.87■□□□□ 0.45
VARS2-203ENST00000428017 GTF2A2P52657 109 aa17.87■□□□□ 0.45
VARS2-203ENST00000428017 SPP2Q13103 211 aa17.87■□□□□ 0.45
VARS2-203ENST00000428017 IQCA1Q86XH1 822 aa17.87■□□□□ 0.45
VARS2-203ENST00000428017 UBAC1Q9BSL1 405 aa17.87■□□□□ 0.45
VARS2-203ENST00000428017 WDR18Q9BV38 432 aa17.87■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms