RNA–Protein interactions for RNA: ENST00000428014.1

SMC1A-203, Transcript of structural maintenance of chromosomes 1A, humanhuman

TSL 3

Gene SMC1A, Length 868 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC1A-203ENST00000428014 MOGSQ13724 837 aa11.01□□□□□ -0.65
SMC1A-203ENST00000428014 SBK1Q52WX2 424 aa11.01□□□□□ -0.65
SMC1A-203ENST00000428014 ZNF280CQ8ND82 737 aa11.01□□□□□ -0.65
SMC1A-203ENST00000428014 GTF3C2Q8WUA4 911 aaPredicted RBP11.01□□□□□ -0.65
SMC1A-203ENST00000428014 DDRGK1Q96HY6 314 aa11.01□□□□□ -0.65
SMC1A-203ENST00000428014 CCDC17Q96LX7 622 aa11.01□□□□□ -0.65
SMC1A-203ENST00000428014 DNAJC2Q99543 621 aaKnown RBP11.01□□□□□ -0.65
SMC1A-203ENST00000428014 DCP1AQ9NPI6 582 aaPredicted RBP11.01□□□□□ -0.65
SMC1A-203ENST00000428014 FZD1Q9UP38 647 aa11.01□□□□□ -0.65
SMC1A-203ENST00000428014 CASP8AP2Q9UKL3 1982 aa11.01□□□□□ -0.65
SMC1A-203ENST00000428014 APBB1O00213 710 aa11□□□□□ -0.65
SMC1A-203ENST00000428014 AMOTL1Q8IY63 956 aa11□□□□□ -0.65
SMC1A-203ENST00000428014 ZNF296Q8WUU4 475 aaPredicted RBP11□□□□□ -0.65
SMC1A-203ENST00000428014 EVI5LQ96CN4 794 aa11□□□□□ -0.65
SMC1A-203ENST00000428014 C12orf42Q96LP6 360 aa11□□□□□ -0.65
SMC1A-203ENST00000428014 PARK7Q99497 189 aaKnown RBP11□□□□□ -0.65
SMC1A-203ENST00000428014 DNAJC18Q9H819 358 aa11□□□□□ -0.65
SMC1A-203ENST00000428014 PNMA3Q9UL41 463 aa11□□□□□ -0.65
SMC1A-203ENST00000428014 SYNPO2Q9UMS6 1093 aa11□□□□□ -0.65
SMC1A-203ENST00000428014 ZHX2Q9Y6X8 837 aa11□□□□□ -0.65
SMC1A-203ENST00000428014 ADGRA2Q96PE1 1338 aa11□□□□□ -0.65
SMC1A-203ENST00000428014 BTBD19C9JJ37 291 aa10.99□□□□□ -0.65
SMC1A-203ENST00000428014 RNF113AO15541 343 aaKnown RBP10.99□□□□□ -0.65
SMC1A-203ENST00000428014 HOXA7P31268 230 aaPredicted RBP10.99□□□□□ -0.65
SMC1A-203ENST00000428014 PDE1AP54750 535 aa10.99□□□□□ -0.65
SMC1A-203ENST00000428014 SP3Q02447 781 aa10.99□□□□□ -0.65
SMC1A-203ENST00000428014 NUCB1Q02818 461 aa10.99□□□□□ -0.65
SMC1A-203ENST00000428014 CRHR2Q13324 411 aa10.99□□□□□ -0.65
SMC1A-203ENST00000428014 TAF1CQ15572 869 aaPredicted RBP10.99□□□□□ -0.65
SMC1A-203ENST00000428014 C17orf99Q6UX52 265 aa10.99□□□□□ -0.65
SMC1A-203ENST00000428014 MAPKAPK5Q8IW41 473 aa10.99□□□□□ -0.65
SMC1A-203ENST00000428014 CRACR2BQ8N4Y2 399 aaPredicted RBP10.99□□□□□ -0.65
SMC1A-203ENST00000428014 PHF12Q96QT6 1004 aa10.99□□□□□ -0.65
SMC1A-203ENST00000428014 TRIM34Q9BYJ4 488 aa10.99□□□□□ -0.65
SMC1A-203ENST00000428014 ZNF287Q9HBT7 754 aa10.99□□□□□ -0.65
SMC1A-203ENST00000428014 ARPP21Q9UBL0 812 aaPredicted RBP10.99□□□□□ -0.65
SMC1A-203ENST00000428014 PALD1Q9ULE6 856 aa10.99□□□□□ -0.65
SMC1A-203ENST00000428014 AGTPBP1Q9UPW5 1226 aa10.99□□□□□ -0.65
SMC1A-203ENST00000428014 ROBO3Q96MS0 1386 aa10.99□□□□□ -0.65
SMC1A-203ENST00000428014 LOC285556D6RIA3 1793 aa10.98□□□□□ -0.65
SMC1A-203ENST00000428014 RIOK3O14730 519 aaKnown RBP10.98□□□□□ -0.65
SMC1A-203ENST00000428014 SMARCA5O60264 1052 aaPredicted RBP10.98□□□□□ -0.65
SMC1A-203ENST00000428014 GCLCP48506 637 aaPredicted RBP10.98□□□□□ -0.65
SMC1A-203ENST00000428014 USP14P54578 494 aa10.98□□□□□ -0.65
SMC1A-203ENST00000428014 BACE1P56817 501 aa10.98□□□□□ -0.65
SMC1A-203ENST00000428014 DYNLL1P63167 89 aaKnown RBP10.98□□□□□ -0.65
SMC1A-203ENST00000428014 EVX2Q03828 476 aa10.98□□□□□ -0.65
SMC1A-203ENST00000428014 ANKRD45Q5TZF3 282 aa10.98□□□□□ -0.65
SMC1A-203ENST00000428014 C12orf60Q5U649 245 aa10.98□□□□□ -0.65
SMC1A-203ENST00000428014 FBXO46Q6PJ61 603 aaPredicted RBP10.98□□□□□ -0.65
SMC1A-203ENST00000428014 FAM43AQ8N2R8 423 aa10.98□□□□□ -0.65
SMC1A-203ENST00000428014 MIGA1Q8NAN2 632 aa10.98□□□□□ -0.65
SMC1A-203ENST00000428014 KIF12Q96FN5 646 aa10.98□□□□□ -0.65
SMC1A-203ENST00000428014 STRBPQ96SI9 672 aaKnown RBP10.98□□□□□ -0.65
SMC1A-203ENST00000428014 ZBTB21Q9ULJ3 1066 aa10.98□□□□□ -0.65
SMC1A-203ENST00000428014 SUPT16HQ9Y5B9 1047 aaKnown RBP10.98□□□□□ -0.65
SMC1A-203ENST00000428014 ZMYM6O95789 1325 aa10.98□□□□□ -0.65
SMC1A-203ENST00000428014 ATAD5Q96QE3 1844 aa10.98□□□□□ -0.65
SMC1A-203ENST00000428014 NAV1Q8NEY1 1877 aa10.98□□□□□ -0.65
SMC1A-203ENST00000428014 USP17L10C9JJH3 530 aa10.97□□□□□ -0.65
SMC1A-203ENST00000428014 MBD4O95243 580 aa10.97□□□□□ -0.65
SMC1A-203ENST00000428014 TBC1D8O95759 1140 aa10.97□□□□□ -0.65
SMC1A-203ENST00000428014 ZMYM1Q5SVZ6 1142 aa10.97□□□□□ -0.65
SMC1A-203ENST00000428014 GPAT2Q6NUI2 795 aa10.97□□□□□ -0.65
SMC1A-203ENST00000428014 LBX2Q6XYB7 198 aa10.97□□□□□ -0.65
SMC1A-203ENST00000428014 CHD1LQ86WJ1 897 aa10.97□□□□□ -0.65
SMC1A-203ENST00000428014 LCORLQ8N3X6 602 aa10.97□□□□□ -0.65
SMC1A-203ENST00000428014 ABHD8Q96I13 439 aa10.97□□□□□ -0.65
SMC1A-203ENST00000428014 MCOLN1Q9GZU1 580 aa10.97□□□□□ -0.65
SMC1A-203ENST00000428014 KIAA1683Q9H0B3 1180 aa10.97□□□□□ -0.65
SMC1A-203ENST00000428014 CABP5Q9NP86 173 aa10.97□□□□□ -0.65
SMC1A-203ENST00000428014 MCM9Q9NXL9 1143 aa10.97□□□□□ -0.65
SMC1A-203ENST00000428014 NDUFB9Q9Y6M9 179 aa10.97□□□□□ -0.65
SMC1A-203ENST00000428014 PATL2C9JE40 543 aaKnown RBP10.96□□□□□ -0.65
SMC1A-203ENST00000428014 HIP1O00291 1037 aa10.96□□□□□ -0.65
SMC1A-203ENST00000428014 PDHXO00330 501 aa10.96□□□□□ -0.65
SMC1A-203ENST00000428014 POLR3DP05423 398 aaPredicted RBP10.96□□□□□ -0.65
SMC1A-203ENST00000428014 BCRP11274 1271 aa10.96□□□□□ -0.65
SMC1A-203ENST00000428014 SHMT1P34896 483 aa10.96□□□□□ -0.65
SMC1A-203ENST00000428014 RGS19P49795 217 aa10.96□□□□□ -0.65
SMC1A-203ENST00000428014 FAM110CQ1W6H9 321 aa10.96□□□□□ -0.65
SMC1A-203ENST00000428014 CERKLQ49MI3 558 aaPredicted RBP10.96□□□□□ -0.65
SMC1A-203ENST00000428014 PPP4R3BQ5MIZ7 849 aa10.96□□□□□ -0.65
SMC1A-203ENST00000428014 TMEM179Q6ZVK1 233 aa10.96□□□□□ -0.65
SMC1A-203ENST00000428014 C16orf86Q6ZW13 317 aa10.96□□□□□ -0.65
SMC1A-203ENST00000428014 ZNF579Q8NAF0 562 aaKnown RBP10.96□□□□□ -0.65
SMC1A-203ENST00000428014 EDC3Q96F86 508 aaKnown RBP10.96□□□□□ -0.65
SMC1A-203ENST00000428014 NACAP1Q9BZK3 213 aa10.96□□□□□ -0.65
SMC1A-203ENST00000428014 PUS7LQ9H0K6 701 aaKnown RBP10.96□□□□□ -0.65
SMC1A-203ENST00000428014 HELLSQ9NRZ9 838 aa10.96□□□□□ -0.65
SMC1A-203ENST00000428014 MYPNQ86TC9 1320 aa10.95□□□□□ -0.66
SMC1A-203ENST00000428014 GSG1L2A8MUP6 293 aa10.95□□□□□ -0.66
SMC1A-203ENST00000428014 MAP3K13O43283 966 aa10.95□□□□□ -0.66
SMC1A-203ENST00000428014 PCP11498 1178 aaKnown RBP10.95□□□□□ -0.66
SMC1A-203ENST00000428014 HOXD10P28358 340 aa10.95□□□□□ -0.66
SMC1A-203ENST00000428014 PLCD1P51178 756 aa10.95□□□□□ -0.66
SMC1A-203ENST00000428014 MFAP1P55081 439 aaKnown RBP10.95□□□□□ -0.66
SMC1A-203ENST00000428014 LACTBP83111 547 aaPredicted RBP10.95□□□□□ -0.66
SMC1A-203ENST00000428014 MKRN3Q13064 507 aaKnown RBP10.95□□□□□ -0.66
SMC1A-203ENST00000428014 SPP2Q13103 211 aa10.95□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms