RNA–Protein interactions for RNA: ENST00000427897.1

HSPG2-205, Transcript of heparan sulfate proteoglycan 2, humanhuman

TSL 5

Gene HSPG2, Length 589 nt, Biotype non stop decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HSPG2-205ENST00000427897 MLLT1Q03111 559 aaPredicted RBP24.89■■□□□ 1.58
HSPG2-205ENST00000427897 SLFNL1Q499Z3 407 aa24.89■■□□□ 1.58
HSPG2-205ENST00000427897 TSHZ3Q63HK5 1081 aa24.89■■□□□ 1.58
HSPG2-205ENST00000427897 WDR18Q9BV38 432 aa24.89■■□□□ 1.58
HSPG2-205ENST00000427897 ATP8A2Q9NTI2 1148 aa24.89■■□□□ 1.58
HSPG2-205ENST00000427897 ZBTB21Q9ULJ3 1066 aa24.89■■□□□ 1.58
HSPG2-205ENST00000427897 SIPA1L1O43166 1804 aa24.89■■□□□ 1.57
HSPG2-205ENST00000427897 TTC41PQ6P2S7 1318 aa24.88■■□□□ 1.57
HSPG2-205ENST00000427897 USP17L10C9JJH3 530 aa24.88■■□□□ 1.57
HSPG2-205ENST00000427897 GNRH1P01148 92 aa24.88■■□□□ 1.57
HSPG2-205ENST00000427897 PSMC4P43686 418 aa24.88■■□□□ 1.57
HSPG2-205ENST00000427897 PLCD1P51178 756 aa24.88■■□□□ 1.57
HSPG2-205ENST00000427897 NBPF11Q86T75 865 aa24.88■■□□□ 1.57
HSPG2-205ENST00000427897 GCC1Q96CN9 775 aa24.88■■□□□ 1.57
HSPG2-205ENST00000427897 C19orf81C9J6K1 198 aa24.87■■□□□ 1.57
HSPG2-205ENST00000427897 GH2P01242 217 aa24.87■■□□□ 1.57
HSPG2-205ENST00000427897 MTMR2Q13614 643 aa24.87■■□□□ 1.57
HSPG2-205ENST00000427897 RAB3GAP1Q15042 981 aa24.87■■□□□ 1.57
HSPG2-205ENST00000427897 ABCB5Q2M3G0 1257 aa24.87■■□□□ 1.57
HSPG2-205ENST00000427897 TATDN1Q6P1N9 297 aa24.87■■□□□ 1.57
HSPG2-205ENST00000427897 KBTBD3Q8NAB2 608 aa24.87■■□□□ 1.57
HSPG2-205ENST00000427897 DCP1AQ9NPI6 582 aaPredicted RBP24.87■■□□□ 1.57
HSPG2-205ENST00000427897 SLC4A4Q9Y6R1 1079 aa24.87■■□□□ 1.57
HSPG2-205ENST00000427897 NAV1Q8NEY1 1877 aa24.87■■□□□ 1.57
HSPG2-205ENST00000427897 MYH7P12883 1935 aa24.86■■□□□ 1.57
HSPG2-205ENST00000427897 BACE1P56817 501 aa24.86■■□□□ 1.57
HSPG2-205ENST00000427897 TREML2Q5T2D2 321 aa24.86■■□□□ 1.57
HSPG2-205ENST00000427897 FEZ1Q99689 392 aa24.86■■□□□ 1.57
HSPG2-205ENST00000427897 ARHGAP39Q9C0H5 1083 aa24.86■■□□□ 1.57
HSPG2-205ENST00000427897 PTPRFP10586 1907 aa24.86■■□□□ 1.57
HSPG2-205ENST00000427897 MPHOSPH10O00566 681 aaKnown RBP24.85■■□□□ 1.57
HSPG2-205ENST00000427897 PRKAB2O43741 272 aa24.85■■□□□ 1.57
HSPG2-205ENST00000427897 GLRX3O76003 335 aaKnown RBP24.85■■□□□ 1.57
HSPG2-205ENST00000427897 PRMT2P55345 433 aa24.85■■□□□ 1.57
HSPG2-205ENST00000427897 FCGRTP55899 365 aa24.85■■□□□ 1.57
HSPG2-205ENST00000427897 SLC9C1Q4G0N8 1177 aa24.85■■□□□ 1.57
HSPG2-205ENST00000427897 SH3D19Q5HYK7 790 aa24.85■■□□□ 1.57
HSPG2-205ENST00000427897 RWDD1Q9H446 243 aaPredicted RBP24.85■■□□□ 1.57
HSPG2-205ENST00000427897 ZFYP08048 801 aaPredicted RBP24.84■■□□□ 1.57
HSPG2-205ENST00000427897 MX1P20591 662 aa24.84■■□□□ 1.57
HSPG2-205ENST00000427897 RGS19P49795 217 aa24.84■■□□□ 1.57
HSPG2-205ENST00000427897 IRX3P78415 501 aaPredicted RBP24.84■■□□□ 1.57
HSPG2-205ENST00000427897 JAG1P78504 1218 aa24.84■■□□□ 1.57
HSPG2-205ENST00000427897 HDAC1Q13547 482 aaPredicted RBP24.84■■□□□ 1.57
HSPG2-205ENST00000427897 PTCH2Q9Y6C5 1203 aa24.84■■□□□ 1.57
HSPG2-205ENST00000427897 CHGBP05060 677 aa24.83■■□□□ 1.57
HSPG2-205ENST00000427897 SHROOM1Q2M3G4 852 aaPredicted RBP24.83■■□□□ 1.57
HSPG2-205ENST00000427897 USP17L2Q6R6M4 530 aa24.83■■□□□ 1.57
HSPG2-205ENST00000427897 PUS7LQ9H0K6 701 aaKnown RBP24.83■■□□□ 1.57
HSPG2-205ENST00000427897 SWAP70Q9UH65 585 aa24.83■■□□□ 1.57
HSPG2-205ENST00000427897 SUPT16HQ9Y5B9 1047 aaKnown RBP24.83■■□□□ 1.57
HSPG2-205ENST00000427897 ADGRA2Q96PE1 1338 aa24.83■■□□□ 1.56
HSPG2-205ENST00000427897 RNF113AO15541 343 aaKnown RBP24.82■■□□□ 1.56
HSPG2-205ENST00000427897 BCRP11274 1271 aa24.82■■□□□ 1.56
HSPG2-205ENST00000427897 CAP1Q01518 475 aa24.82■■□□□ 1.56
HSPG2-205ENST00000427897 ZYXQ15942 572 aaKnown RBP24.82■■□□□ 1.56
HSPG2-205ENST00000427897 ANKRD13CQ8N6S4 541 aa24.82■■□□□ 1.56
HSPG2-205ENST00000427897 RAET1EQ8TD07 263 aa24.82■■□□□ 1.56
HSPG2-205ENST00000427897 FSD1Q9BTV5 496 aa24.82■■□□□ 1.56
HSPG2-205ENST00000427897 CYP2D6P10635 497 aa24.81■■□□□ 1.56
HSPG2-205ENST00000427897 GCLCP48506 637 aaPredicted RBP24.81■■□□□ 1.56
HSPG2-205ENST00000427897 APPBP2Q92624 585 aa24.81■■□□□ 1.56
HSPG2-205ENST00000427897 TRIM47Q96LD4 638 aa24.81■■□□□ 1.56
HSPG2-205ENST00000427897 TMEM106CQ9BVX2 250 aa24.81■■□□□ 1.56
HSPG2-205ENST00000427897 ASCC2Q9H1I8 757 aaPredicted RBP24.81■■□□□ 1.56
HSPG2-205ENST00000427897 USP17L12C9JPN9 530 aa24.8■■□□□ 1.56
HSPG2-205ENST00000427897 USP17L21D6R901 530 aa24.8■■□□□ 1.56
HSPG2-205ENST00000427897 SHMT1P34896 483 aa24.8■■□□□ 1.56
HSPG2-205ENST00000427897 USP14P54578 494 aa24.8■■□□□ 1.56
HSPG2-205ENST00000427897 EXOC6Q8TAG9 804 aa24.8■■□□□ 1.56
HSPG2-205ENST00000427897 OTUD7AQ8TE49 926 aaPredicted RBP24.8■■□□□ 1.56
HSPG2-205ENST00000427897 SRRDQ9UH36 339 aa24.8■■□□□ 1.56
HSPG2-205ENST00000427897 MYPNQ86TC9 1320 aa24.8■■□□□ 1.56
HSPG2-205ENST00000427897 APPP05067 770 aa24.79■■□□□ 1.56
HSPG2-205ENST00000427897 GABPAQ06546 454 aa24.79■■□□□ 1.56
HSPG2-205ENST00000427897 TAOK2Q9UL54 1235 aa24.79■■□□□ 1.56
HSPG2-205ENST00000427897 LOC285556D6RIA3 1793 aa24.79■■□□□ 1.56
HSPG2-205ENST00000427897 ZSWIM8A7E2V4 1837 aa24.78■■□□□ 1.56
HSPG2-205ENST00000427897 TNPO2O14787 897 aaKnown RBP24.78■■□□□ 1.56
HSPG2-205ENST00000427897 B4GALNT3Q6L9W6 998 aa24.78■■□□□ 1.56
HSPG2-205ENST00000427897 PI4K2BQ8TCG2 481 aa24.78■■□□□ 1.56
HSPG2-205ENST00000427897 COA7Q96BR5 231 aa24.78■■□□□ 1.56
HSPG2-205ENST00000427897 DYNLL2Q96FJ2 89 aa24.78■■□□□ 1.56
HSPG2-205ENST00000427897 STRBPQ96SI9 672 aaKnown RBP24.78■■□□□ 1.56
HSPG2-205ENST00000427897 BIN2Q9UBW5 565 aaPredicted RBP24.78■■□□□ 1.56
HSPG2-205ENST00000427897 MYCP01106 439 aaPredicted RBP24.77■■□□□ 1.56
HSPG2-205ENST00000427897 GNAT2P19087 354 aa24.77■■□□□ 1.56
HSPG2-205ENST00000427897 HOXA7P31268 230 aaPredicted RBP24.77■■□□□ 1.56
HSPG2-205ENST00000427897 SEPT2Q15019 361 aa24.77■■□□□ 1.56
HSPG2-205ENST00000427897 C12orf60Q5U649 245 aa24.77■■□□□ 1.56
HSPG2-205ENST00000427897 CCAR1Q8IX12 1150 aaKnown RBP24.77■■□□□ 1.56
HSPG2-205ENST00000427897 ARMC5Q96C12 935 aa24.77■■□□□ 1.56
HSPG2-205ENST00000427897 ARPP21Q9UBL0 812 aaPredicted RBP24.77■■□□□ 1.56
HSPG2-205ENST00000427897 BAZ2AQ9UIF9 1905 aaKnown RBP24.76■■□□□ 1.55
HSPG2-205ENST00000427897 DDX60LQ5H9U9 1706 aaKnown RBP24.76■■□□□ 1.55
HSPG2-205ENST00000427897 CYP2D7A0A087X1C5 515 aa24.76■■□□□ 1.55
HSPG2-205ENST00000427897 CTGFP29279 349 aa24.76■■□□□ 1.55
HSPG2-205ENST00000427897 EVX2Q03828 476 aa24.76■■□□□ 1.55
HSPG2-205ENST00000427897 FAM110CQ1W6H9 321 aa24.76■■□□□ 1.55
HSPG2-205ENST00000427897 TMEM179Q6ZVK1 233 aa24.76■■□□□ 1.55
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms