RNA–Protein interactions for RNA: ENST00000427755.2

DEPDC7-203, Transcript of DEP domain containing 7, humanhuman

TSL 2

Gene DEPDC7, Length 1,212 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC7-203ENST00000427755 MIGA1Q8NAN2 632 aa15.94■□□□□ 0.14
DEPDC7-203ENST00000427755 GINM1Q9NU53 330 aa15.94■□□□□ 0.14
DEPDC7-203ENST00000427755 MORF4L1Q9UBU8 362 aa15.94■□□□□ 0.14
DEPDC7-203ENST00000427755 GJD2Q9UKL4 321 aa15.94■□□□□ 0.14
DEPDC7-203ENST00000427755 ZBTB21Q9ULJ3 1066 aa15.94■□□□□ 0.14
DEPDC7-203ENST00000427755 SIPA1L1O43166 1804 aa15.94■□□□□ 0.14
DEPDC7-203ENST00000427755 MAST2Q6P0Q8 1798 aa15.93■□□□□ 0.14
DEPDC7-203ENST00000427755 HLA-DOAP06340 250 aa15.93■□□□□ 0.14
DEPDC7-203ENST00000427755 FXR1P51114 621 aaKnown RBP eCLIP15.93■□□□□ 0.14
DEPDC7-203ENST00000427755 AACSQ86V21 672 aa15.93■□□□□ 0.14
DEPDC7-203ENST00000427755 ERC1Q8IUD2 1116 aa15.93■□□□□ 0.14
DEPDC7-203ENST00000427755 CRACR2BQ8N4Y2 399 aaPredicted RBP15.93■□□□□ 0.14
DEPDC7-203ENST00000427755 MAGEB6Q8N7X4 407 aa15.93■□□□□ 0.14
DEPDC7-203ENST00000427755 PAK6Q9NQU5 681 aaPredicted RBP15.93■□□□□ 0.14
DEPDC7-203ENST00000427755 LOC285556D6RIA3 1793 aa15.92■□□□□ 0.14
DEPDC7-203ENST00000427755 C19orf81C9J6K1 198 aa15.92■□□□□ 0.14
DEPDC7-203ENST00000427755 USP17L10C9JJH3 530 aa15.92■□□□□ 0.14
DEPDC7-203ENST00000427755 FARP2O94887 1054 aaPredicted RBP15.92■□□□□ 0.14
DEPDC7-203ENST00000427755 CERS3Q8IU89 383 aa15.92■□□□□ 0.14
DEPDC7-203ENST00000427755 RHPN1Q8TCX5 695 aa15.92■□□□□ 0.14
DEPDC7-203ENST00000427755 P2RX7Q99572 595 aaKnown RBP15.92■□□□□ 0.14
DEPDC7-203ENST00000427755 TRIM34Q9BYJ4 488 aa15.92■□□□□ 0.14
DEPDC7-203ENST00000427755 TXNRD2Q9NNW7 524 aa15.92■□□□□ 0.14
DEPDC7-203ENST00000427755 TMOD4Q9NZQ9 345 aa15.92■□□□□ 0.14
DEPDC7-203ENST00000427755 PEX10O60683 326 aa15.91■□□□□ 0.14
DEPDC7-203ENST00000427755 IRX3P78415 501 aaPredicted RBP15.91■□□□□ 0.14
DEPDC7-203ENST00000427755 MAP3K12Q12852 859 aa15.91■□□□□ 0.14
DEPDC7-203ENST00000427755 TATDN1Q6P1N9 297 aa15.91■□□□□ 0.14
DEPDC7-203ENST00000427755 TMED8Q6PL24 325 aaPredicted RBP15.91■□□□□ 0.14
DEPDC7-203ENST00000427755 POTEEQ6S8J3 1075 aa15.91■□□□□ 0.14
DEPDC7-203ENST00000427755 DPF3Q92784 378 aa15.91■□□□□ 0.14
DEPDC7-203ENST00000427755 DEFB118Q96PH6 123 aa15.91■□□□□ 0.14
DEPDC7-203ENST00000427755 RIOK1Q9BRS2 568 aaKnown RBP15.91■□□□□ 0.14
DEPDC7-203ENST00000427755 CRISPLD2Q9H0B8 497 aa15.91■□□□□ 0.14
DEPDC7-203ENST00000427755 IL1RAPL2Q9NP60 686 aa15.91■□□□□ 0.14
DEPDC7-203ENST00000427755 EMILIN3Q9NT22 766 aa15.91■□□□□ 0.14
DEPDC7-203ENST00000427755 TAOK2Q9UL54 1235 aa15.91■□□□□ 0.14
DEPDC7-203ENST00000427755 GH2P01242 217 aa15.9■□□□□ 0.14
DEPDC7-203ENST00000427755 USP5P45974 858 aa15.9■□□□□ 0.14
DEPDC7-203ENST00000427755 HERVK_113P62684 666 aa15.9■□□□□ 0.14
DEPDC7-203ENST00000427755 HSP90AB4PQ58FF6 505 aa15.9■□□□□ 0.14
DEPDC7-203ENST00000427755 SIRT2Q8IXJ6 389 aa15.9■□□□□ 0.14
DEPDC7-203ENST00000427755 HTATIP2Q9BUP3 242 aa15.9■□□□□ 0.14
DEPDC7-203ENST00000427755 EHD4Q9H223 541 aa15.9■□□□□ 0.14
DEPDC7-203ENST00000427755 HMGCRP04035 888 aa15.89■□□□□ 0.13
DEPDC7-203ENST00000427755 CAPN2P17655 700 aa15.89■□□□□ 0.13
DEPDC7-203ENST00000427755 TRIM32Q13049 653 aa15.89■□□□□ 0.13
DEPDC7-203ENST00000427755 XRN2Q9H0D6 950 aaKnown RBP eCLIP15.89■□□□□ 0.13
DEPDC7-203ENST00000427755 RBPJLQ9UBG7 517 aa15.89■□□□□ 0.13
DEPDC7-203ENST00000427755 SERPINB13Q9UIV8 391 aa15.89■□□□□ 0.13
DEPDC7-203ENST00000427755 TFRCP02786 760 aaKnown RBP15.88■□□□□ 0.13
DEPDC7-203ENST00000427755 PLCD1P51178 756 aa15.88■□□□□ 0.13
DEPDC7-203ENST00000427755 Q3C1V9 767 aa15.88■□□□□ 0.13
DEPDC7-203ENST00000427755 USP17L2Q6R6M4 530 aa15.88■□□□□ 0.13
DEPDC7-203ENST00000427755 CHRDL2Q6WN34 429 aa15.88■□□□□ 0.13
DEPDC7-203ENST00000427755 RPAP2Q8IXW5 612 aaPredicted RBP15.88■□□□□ 0.13
DEPDC7-203ENST00000427755 GPRC5AQ8NFJ5 357 aa15.88■□□□□ 0.13
DEPDC7-203ENST00000427755 C12orf42Q96LP6 360 aa15.88■□□□□ 0.13
DEPDC7-203ENST00000427755 ZBTB40Q9NUA8 1239 aa15.88■□□□□ 0.13
DEPDC7-203ENST00000427755 MGAMO43451 1857 aa15.88■□□□□ 0.13
DEPDC7-203ENST00000427755 PDE6AP16499 860 aa15.87■□□□□ 0.13
DEPDC7-203ENST00000427755 SHMT1P34896 483 aa15.87■□□□□ 0.13
DEPDC7-203ENST00000427755 GABPAQ06546 454 aa15.87■□□□□ 0.13
DEPDC7-203ENST00000427755 TTF1Q15361 905 aaPredicted RBP15.87■□□□□ 0.13
DEPDC7-203ENST00000427755 TTC6Q86TZ1 520 aa15.87■□□□□ 0.13
DEPDC7-203ENST00000427755 PPIL4Q8WUA2 492 aaKnown RBP eCLIP15.87■□□□□ 0.13
DEPDC7-203ENST00000427755 TRIB2Q92519 343 aa15.87■□□□□ 0.13
DEPDC7-203ENST00000427755 KIF1BPQ96EK5 621 aa15.87■□□□□ 0.13
DEPDC7-203ENST00000427755 PRO3102Q9H379 93 aa15.87■□□□□ 0.13
DEPDC7-203ENST00000427755 COG6Q9Y2V7 657 aa15.87■□□□□ 0.13
DEPDC7-203ENST00000427755 TCRBV5S4A2TA0A5A2 114 aa15.86■□□□□ 0.13
DEPDC7-203ENST00000427755 MS4A1P11836 297 aa15.86■□□□□ 0.13
DEPDC7-203ENST00000427755 GUCY1A2P33402 732 aa15.86■□□□□ 0.13
DEPDC7-203ENST00000427755 ERVK-9P63128 1117 aa15.86■□□□□ 0.13
DEPDC7-203ENST00000427755 ERVK-24P63145 666 aa15.86■□□□□ 0.13
DEPDC7-203ENST00000427755 EVX2Q03828 476 aa15.86■□□□□ 0.13
DEPDC7-203ENST00000427755 CERKLQ49MI3 558 aaPredicted RBP15.86■□□□□ 0.13
DEPDC7-203ENST00000427755 SLC9C2Q5TAH2 1124 aa15.86■□□□□ 0.13
DEPDC7-203ENST00000427755 MAP3K21Q5TCX8 1036 aa15.86■□□□□ 0.13
DEPDC7-203ENST00000427755 CLASRPQ8N2M8 674 aaKnown RBP15.86■□□□□ 0.13
DEPDC7-203ENST00000427755 ACER1Q8TDN7 264 aa15.86■□□□□ 0.13
DEPDC7-203ENST00000427755 DIS3LQ8TF46 1054 aaKnown RBP15.86■□□□□ 0.13
DEPDC7-203ENST00000427755 GTF3C2Q8WUA4 911 aaPredicted RBP15.86■□□□□ 0.13
DEPDC7-203ENST00000427755 USP6NLQ92738 828 aa15.86■□□□□ 0.13
DEPDC7-203ENST00000427755 PORCNQ9H237 461 aa15.86■□□□□ 0.13
DEPDC7-203ENST00000427755 RBM27Q9P2N5 1060 aaKnown RBP15.86■□□□□ 0.13
DEPDC7-203ENST00000427755 DDX19BQ9UMR2 479 aa15.86■□□□□ 0.13
DEPDC7-203ENST00000427755 RPTORQ8N122 1335 aa15.86■□□□□ 0.13
DEPDC7-203ENST00000427755 FOCADQ5VW36 1801 aa15.85■□□□□ 0.13
DEPDC7-203ENST00000427755 ATAD5Q96QE3 1844 aa15.85■□□□□ 0.13
DEPDC7-203ENST00000427755 MAGEB6P1A0A0J9YX57 407 aa15.85■□□□□ 0.13
DEPDC7-203ENST00000427755 APBB1O00213 710 aa15.85■□□□□ 0.13
DEPDC7-203ENST00000427755 CNMDO75829 334 aa15.85■□□□□ 0.13
DEPDC7-203ENST00000427755 XRCC5P13010 732 aaKnown RBP15.85■□□□□ 0.13
DEPDC7-203ENST00000427755 CYP2B6P20813 491 aa15.85■□□□□ 0.13
DEPDC7-203ENST00000427755 MAPK4P31152 587 aa15.85■□□□□ 0.13
DEPDC7-203ENST00000427755 MNX1P50219 401 aaPredicted RBP15.85■□□□□ 0.13
DEPDC7-203ENST00000427755 RAB3GAP1Q15042 981 aa15.85■□□□□ 0.13
DEPDC7-203ENST00000427755 ZYXQ15942 572 aaKnown RBP15.85■□□□□ 0.13
DEPDC7-203ENST00000427755 ABCB5Q2M3G0 1257 aa15.85■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms