RNA–Protein interactions for RNA: ENST00000427645.5

SMARCAL1-206, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a like 1, humanhuman

TSL 3

Gene SMARCAL1, Length 977 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCAL1-206ENST00000427645 RUFY3Q7L099 469 aa9.77□□□□□ -0.85
SMARCAL1-206ENST00000427645 IFNL1Q8IU54 200 aa9.77□□□□□ -0.85
SMARCAL1-206ENST00000427645 CDAN1Q8IWY9 1227 aa9.77□□□□□ -0.85
SMARCAL1-206ENST00000427645 MTMR14Q8NCE2 650 aa9.77□□□□□ -0.85
SMARCAL1-206ENST00000427645 SH3RF3Q8TEJ3 882 aaPredicted RBP9.77□□□□□ -0.85
SMARCAL1-206ENST00000427645 SDR42E1Q8WUS8 393 aa9.77□□□□□ -0.85
SMARCAL1-206ENST00000427645 JAKMIP1Q96N16 626 aaKnown RBP9.77□□□□□ -0.85
SMARCAL1-206ENST00000427645 IPO9Q96P70 1041 aaKnown RBP9.77□□□□□ -0.85
SMARCAL1-206ENST00000427645 ALDH8A1Q9H2A2 487 aaPredicted RBP9.77□□□□□ -0.85
SMARCAL1-206ENST00000427645 RNF41Q9H4P4 317 aaPredicted RBP9.77□□□□□ -0.85
SMARCAL1-206ENST00000427645 CNNM2Q9H8M5 875 aa9.77□□□□□ -0.85
SMARCAL1-206ENST00000427645 DCP1AQ9NPI6 582 aaPredicted RBP9.77□□□□□ -0.85
SMARCAL1-206ENST00000427645 USP40Q9NVE5 1235 aa9.77□□□□□ -0.85
SMARCAL1-206ENST00000427645 ARPP21Q9UBL0 812 aaPredicted RBP9.77□□□□□ -0.85
SMARCAL1-206ENST00000427645 ANAPC4Q9UJX5 808 aa9.77□□□□□ -0.85
SMARCAL1-206ENST00000427645 TRIM17Q9Y577 477 aa9.77□□□□□ -0.85
SMARCAL1-206ENST00000427645 HTTP42858 3142 aa9.77□□□□□ -0.85
SMARCAL1-206ENST00000427645 ZNF646O15015 1829 aaPredicted RBP9.77□□□□□ -0.85
SMARCAL1-206ENST00000427645 POTEFA5A3E0 1075 aa9.76□□□□□ -0.85
SMARCAL1-206ENST00000427645 E7EWF7 191 aa9.76□□□□□ -0.85
SMARCAL1-206ENST00000427645 MYO1BO43795 1136 aa9.76□□□□□ -0.85
SMARCAL1-206ENST00000427645 CASTP20810 708 aaKnown RBP9.76□□□□□ -0.85
SMARCAL1-206ENST00000427645 CAP1Q01518 475 aa9.76□□□□□ -0.85
SMARCAL1-206ENST00000427645 RASA3Q14644 834 aa9.76□□□□□ -0.85
SMARCAL1-206ENST00000427645 ANKRD1Q15327 319 aa9.76□□□□□ -0.85
SMARCAL1-206ENST00000427645 PRPF38BQ5VTL8 546 aaKnown RBP9.76□□□□□ -0.85
SMARCAL1-206ENST00000427645 APOBEC3HQ6NTF7 200 aaKnown RBP9.76□□□□□ -0.85
SMARCAL1-206ENST00000427645 MFSD6Q6ZSS7 791 aa9.76□□□□□ -0.85
SMARCAL1-206ENST00000427645 DHX32Q7L7V1 743 aaKnown RBP9.76□□□□□ -0.85
SMARCAL1-206ENST00000427645 HSCBQ8IWL3 235 aa9.76□□□□□ -0.85
SMARCAL1-206ENST00000427645 TEX11Q8IYF3 940 aa9.76□□□□□ -0.85
SMARCAL1-206ENST00000427645 NCOA7Q8NI08 942 aa9.76□□□□□ -0.85
SMARCAL1-206ENST00000427645 TGFBRAP1Q8WUH2 860 aa9.76□□□□□ -0.85
SMARCAL1-206ENST00000427645 WNK4Q96J92 1243 aa9.76□□□□□ -0.85
SMARCAL1-206ENST00000427645 KRT23Q9C075 422 aa9.76□□□□□ -0.85
SMARCAL1-206ENST00000427645 ZNF287Q9HBT7 754 aa9.76□□□□□ -0.85
SMARCAL1-206ENST00000427645 TAOK2Q9UL54 1235 aa9.76□□□□□ -0.85
SMARCAL1-206ENST00000427645 MINDY4BA8MYZ0 360 aa9.75□□□□□ -0.85
SMARCAL1-206ENST00000427645 USP17L12C9JPN9 530 aa9.75□□□□□ -0.85
SMARCAL1-206ENST00000427645 USP17L21D6R901 530 aa9.75□□□□□ -0.85
SMARCAL1-206ENST00000427645 PPP1R12BO60237 982 aaPredicted RBP9.75□□□□□ -0.85
SMARCAL1-206ENST00000427645 USP2O75604 605 aaPredicted RBP9.75□□□□□ -0.85
SMARCAL1-206ENST00000427645 POLR3DP05423 398 aaPredicted RBP9.75□□□□□ -0.85
SMARCAL1-206ENST00000427645 MCM5P33992 734 aa9.75□□□□□ -0.85
SMARCAL1-206ENST00000427645 RHBDL3P58872 404 aa9.75□□□□□ -0.85
SMARCAL1-206ENST00000427645 PPARAQ07869 468 aa9.75□□□□□ -0.85
SMARCAL1-206ENST00000427645 AKNAD1Q5T1N1 836 aa9.75□□□□□ -0.85
SMARCAL1-206ENST00000427645 CTR9Q6PD62 1173 aa9.75□□□□□ -0.85
SMARCAL1-206ENST00000427645 OTOP1Q7RTM1 612 aa9.75□□□□□ -0.85
SMARCAL1-206ENST00000427645 RALYLQ86SE5 291 aaKnown RBP9.75□□□□□ -0.85
SMARCAL1-206ENST00000427645 TTC6Q86TZ1 520 aa9.75□□□□□ -0.85
SMARCAL1-206ENST00000427645 PTPN18Q99952 460 aa9.75□□□□□ -0.85
SMARCAL1-206ENST00000427645 MTA3Q9BTC8 594 aa9.75□□□□□ -0.85
SMARCAL1-206ENST00000427645 EPB41L4AQ9HCS5 686 aaPredicted RBP9.75□□□□□ -0.85
SMARCAL1-206ENST00000427645 MCM9Q9NXL9 1143 aa9.75□□□□□ -0.85
SMARCAL1-206ENST00000427645 TMOD2Q9NZR1 351 aa9.75□□□□□ -0.85
SMARCAL1-206ENST00000427645 BRCA2P51587 3418 aa9.75□□□□□ -0.85
SMARCAL1-206ENST00000427645 MANSC4A6NHS7 340 aaPredicted RBP9.74□□□□□ -0.85
SMARCAL1-206ENST00000427645 FGRP09769 529 aa9.74□□□□□ -0.85
SMARCAL1-206ENST00000427645 RPS6KB1P23443 525 aa9.74□□□□□ -0.85
SMARCAL1-206ENST00000427645 HAND2P61296 217 aa9.74□□□□□ -0.85
SMARCAL1-206ENST00000427645 PDE4BQ07343 736 aa9.74□□□□□ -0.85
SMARCAL1-206ENST00000427645 CRHR2Q13324 411 aa9.74□□□□□ -0.85
SMARCAL1-206ENST00000427645 MAP3K11Q16584 847 aa9.74□□□□□ -0.85
SMARCAL1-206ENST00000427645 ADCK5Q3MIX3 580 aa9.74□□□□□ -0.85
SMARCAL1-206ENST00000427645 NOM1Q5C9Z4 860 aaKnown RBP9.74□□□□□ -0.85
SMARCAL1-206ENST00000427645 C12orf60Q5U649 245 aa9.74□□□□□ -0.85
SMARCAL1-206ENST00000427645 FKBP1CQ5VVH2 108 aa9.74□□□□□ -0.85
SMARCAL1-206ENST00000427645 CDC42EP5Q6NZY7 148 aa9.74□□□□□ -0.85
SMARCAL1-206ENST00000427645 FBXL16Q8N461 479 aa9.74□□□□□ -0.85
SMARCAL1-206ENST00000427645 CD99L2Q8TCZ2 262 aa9.74□□□□□ -0.85
SMARCAL1-206ENST00000427645 STAG1Q8WVM7 1258 aa9.74□□□□□ -0.85
SMARCAL1-206ENST00000427645 CHMP4CQ96CF2 233 aa9.74□□□□□ -0.85
SMARCAL1-206ENST00000427645 CFHR5Q9BXR6 569 aa9.74□□□□□ -0.85
SMARCAL1-206ENST00000427645 IDI2Q9BXS1 227 aa9.74□□□□□ -0.85
SMARCAL1-206ENST00000427645 DHX36Q9H2U1 1008 aaKnown RBP9.74□□□□□ -0.85
SMARCAL1-206ENST00000427645 TDRD3Q9H7E2 651 aaKnown RBP9.74□□□□□ -0.85
SMARCAL1-206ENST00000427645 ELP3Q9H9T3 547 aa9.74□□□□□ -0.85
SMARCAL1-206ENST00000427645 PDRG1Q9NUG6 133 aa9.74□□□□□ -0.85
SMARCAL1-206ENST00000427645 WDR19Q8NEZ3 1342 aa9.74□□□□□ -0.85
SMARCAL1-206ENST00000427645 TCP10L2B9ZVM9 353 aa9.73□□□□□ -0.85
SMARCAL1-206ENST00000427645 K7ELQ4 463 aaPredicted RBP9.73□□□□□ -0.85
SMARCAL1-206ENST00000427645 ENTPD3O75355 529 aa9.73□□□□□ -0.85
SMARCAL1-206ENST00000427645 ECM2O94769 699 aaPredicted RBP9.73□□□□□ -0.85
SMARCAL1-206ENST00000427645 ALDH1A1P00352 501 aa9.73□□□□□ -0.85
SMARCAL1-206ENST00000427645 INHBEP58166 350 aa9.73□□□□□ -0.85
SMARCAL1-206ENST00000427645 FGD1P98174 961 aa9.73□□□□□ -0.85
SMARCAL1-206ENST00000427645 SUPT20HL1Q3ZLR7 823 aa9.73□□□□□ -0.85
SMARCAL1-206ENST00000427645 ESR2Q92731 530 aa9.73□□□□□ -0.85
SMARCAL1-206ENST00000427645 OPTNQ96CV9 577 aa9.73□□□□□ -0.85
SMARCAL1-206ENST00000427645 ZSCAN31Q96LW9 406 aaPredicted RBP9.73□□□□□ -0.85
SMARCAL1-206ENST00000427645 TTC14Q96N46 770 aa9.73□□□□□ -0.85
SMARCAL1-206ENST00000427645 TBC1D2Q9BYX2 928 aa9.73□□□□□ -0.85
SMARCAL1-206ENST00000427645 UPF3BQ9BZI7 483 aaKnown RBP9.73□□□□□ -0.85
SMARCAL1-206ENST00000427645 TMEM39BQ9GZU3 492 aa9.73□□□□□ -0.85
SMARCAL1-206ENST00000427645 ZNF70Q9UC06 446 aaPredicted RBP9.73□□□□□ -0.85
SMARCAL1-206ENST00000427645 LAMA4Q16363 1823 aa9.72□□□□□ -0.85
SMARCAL1-206ENST00000427645 WDHD1O75717 1129 aaPredicted RBP9.72□□□□□ -0.85
SMARCAL1-206ENST00000427645 MYCP01106 439 aaPredicted RBP9.72□□□□□ -0.85
SMARCAL1-206ENST00000427645 HLA-DOAP06340 250 aa9.72□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms