RNA–Protein interactions for RNA: ENST00000427506.5

GPC1-205, Transcript of glypican 1, humanhuman

TSL 3

Gene GPC1, Length 573 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPC1-205ENST00000427506 MTMR2Q13614 643 aa22.26■■□□□ 1.15
GPC1-205ENST00000427506 SHROOM1Q2M3G4 852 aaPredicted RBP22.26■■□□□ 1.15
GPC1-205ENST00000427506 ZSCAN25Q6NSZ9 544 aa22.26■■□□□ 1.15
GPC1-205ENST00000427506 SDR42E1Q8WUS8 393 aa22.26■■□□□ 1.15
GPC1-205ENST00000427506 TRIM47Q96LD4 638 aa22.26■■□□□ 1.15
GPC1-205ENST00000427506 CRBNQ96SW2 442 aa22.26■■□□□ 1.15
GPC1-205ENST00000427506 TMOD4Q9NZQ9 345 aa22.26■■□□□ 1.15
GPC1-205ENST00000427506 MYH1P12882 1939 aa22.25■■□□□ 1.15
GPC1-205ENST00000427506 GH2P01242 217 aa22.25■■□□□ 1.15
GPC1-205ENST00000427506 OSBPP22059 807 aa22.25■■□□□ 1.15
GPC1-205ENST00000427506 CTGFP29279 349 aa22.25■■□□□ 1.15
GPC1-205ENST00000427506 PLCD1P51178 756 aa22.25■■□□□ 1.15
GPC1-205ENST00000427506 FCGRTP55899 365 aa22.25■■□□□ 1.15
GPC1-205ENST00000427506 BACE1P56817 501 aa22.25■■□□□ 1.15
GPC1-205ENST00000427506 SLFNL1Q499Z3 407 aa22.25■■□□□ 1.15
GPC1-205ENST00000427506 SH3D19Q5HYK7 790 aa22.25■■□□□ 1.15
GPC1-205ENST00000427506 TATDN1Q6P1N9 297 aa22.25■■□□□ 1.15
GPC1-205ENST00000427506 ARMC5Q96C12 935 aa22.25■■□□□ 1.15
GPC1-205ENST00000427506 PTPRFP10586 1907 aa22.24■■□□□ 1.15
GPC1-205ENST00000427506 USP17L10C9JJH3 530 aa22.24■■□□□ 1.15
GPC1-205ENST00000427506 MBD4O95243 580 aa22.24■■□□□ 1.15
GPC1-205ENST00000427506 CERKLQ49MI3 558 aaPredicted RBP22.24■■□□□ 1.15
GPC1-205ENST00000427506 SRRDQ9UH36 339 aa22.24■■□□□ 1.15
GPC1-205ENST00000427506 ZSWIM8A7E2V4 1837 aa22.24■■□□□ 1.15
GPC1-205ENST00000427506 C19orf81C9J6K1 198 aa22.23■■□□□ 1.15
GPC1-205ENST00000427506 UBE3CQ15386 1083 aa22.23■■□□□ 1.15
GPC1-205ENST00000427506 CABP5Q9NP86 173 aa22.23■■□□□ 1.15
GPC1-205ENST00000427506 DCP1AQ9NPI6 582 aaPredicted RBP22.23■■□□□ 1.15
GPC1-205ENST00000427506 RAB3GAP1Q15042 981 aa22.22■■□□□ 1.15
GPC1-205ENST00000427506 ABCB5Q2M3G0 1257 aa22.22■■□□□ 1.15
GPC1-205ENST00000427506 TSHZ3Q63HK5 1081 aa22.22■■□□□ 1.15
GPC1-205ENST00000427506 ANKRD13CQ8N6S4 541 aa22.22■■□□□ 1.15
GPC1-205ENST00000427506 RAET1EQ8TD07 263 aa22.22■■□□□ 1.15
GPC1-205ENST00000427506 SH3TC2Q8TF17 1288 aa22.22■■□□□ 1.15
GPC1-205ENST00000427506 TMEM106CQ9BVX2 250 aa22.22■■□□□ 1.15
GPC1-205ENST00000427506 ZBTB47Q9UFB7 747 aaPredicted RBP22.22■■□□□ 1.15
GPC1-205ENST00000427506 MYPNQ86TC9 1320 aa22.22■■□□□ 1.15
GPC1-205ENST00000427506 PRKAB2O43741 272 aa22.21■■□□□ 1.15
GPC1-205ENST00000427506 MYCP01106 439 aaPredicted RBP22.21■■□□□ 1.15
GPC1-205ENST00000427506 CHGBP05060 677 aa22.21■■□□□ 1.15
GPC1-205ENST00000427506 IRX3P78415 501 aaPredicted RBP22.21■■□□□ 1.15
GPC1-205ENST00000427506 DDRGK1Q96HY6 314 aa22.21■■□□□ 1.15
GPC1-205ENST00000427506 ZNF333Q96JL9 665 aa22.21■■□□□ 1.15
GPC1-205ENST00000427506 FEZ1Q99689 392 aa22.21■■□□□ 1.15
GPC1-205ENST00000427506 ASCC2Q9H1I8 757 aaPredicted RBP22.21■■□□□ 1.15
GPC1-205ENST00000427506 ATP8A2Q9NTI2 1148 aa22.21■■□□□ 1.15
GPC1-205ENST00000427506 NAV1Q8NEY1 1877 aa22.2■■□□□ 1.14
GPC1-205ENST00000427506 POTEFA5A3E0 1075 aa22.2■■□□□ 1.14
GPC1-205ENST00000427506 SHMT1P34896 483 aa22.2■■□□□ 1.14
GPC1-205ENST00000427506 GCLCP48506 637 aaPredicted RBP22.2■■□□□ 1.14
GPC1-205ENST00000427506 AMOTL1Q8IY63 956 aa22.2■■□□□ 1.14
GPC1-205ENST00000427506 LOC285556D6RIA3 1793 aa22.2■■□□□ 1.14
GPC1-205ENST00000427506 MPHOSPH10O00566 681 aaKnown RBP22.19■■□□□ 1.14
GPC1-205ENST00000427506 TNPO2O14787 897 aaKnown RBP22.19■■□□□ 1.14
GPC1-205ENST00000427506 CYP2D6P10635 497 aa22.19■■□□□ 1.14
GPC1-205ENST00000427506 ZYXQ15942 572 aaKnown RBP22.19■■□□□ 1.14
GPC1-205ENST00000427506 USP17L2Q6R6M4 530 aa22.19■■□□□ 1.14
GPC1-205ENST00000427506 KBTBD3Q8NAB2 608 aa22.19■■□□□ 1.14
GPC1-205ENST00000427506 SLC4A4Q9Y6R1 1079 aa22.19■■□□□ 1.14
GPC1-205ENST00000427506 ERC2O15083 957 aa22.18■■□□□ 1.14
GPC1-205ENST00000427506 EVX2Q03828 476 aa22.18■■□□□ 1.14
GPC1-205ENST00000427506 PRKCZQ05513 592 aa22.18■■□□□ 1.14
GPC1-205ENST00000427506 GABPAQ06546 454 aa22.18■■□□□ 1.14
GPC1-205ENST00000427506 FAM110CQ1W6H9 321 aa22.18■■□□□ 1.14
GPC1-205ENST00000427506 PUS7LQ9H0K6 701 aaKnown RBP22.18■■□□□ 1.14
GPC1-205ENST00000427506 TTC41PQ6P2S7 1318 aa22.17■■□□□ 1.14
GPC1-205ENST00000427506 HOXA7P31268 230 aaPredicted RBP22.17■■□□□ 1.14
GPC1-205ENST00000427506 GRK4P32298 578 aa22.17■■□□□ 1.14
GPC1-205ENST00000427506 BIN2Q9UBW5 565 aaPredicted RBP22.17■■□□□ 1.14
GPC1-205ENST00000427506 SWAP70Q9UH65 585 aa22.17■■□□□ 1.14
GPC1-205ENST00000427506 GABRQQ9UN88 632 aa22.17■■□□□ 1.14
GPC1-205ENST00000427506 DDX60LQ5H9U9 1706 aaKnown RBP22.17■■□□□ 1.14
GPC1-205ENST00000427506 ANKRD45Q5TZF3 282 aa22.16■■□□□ 1.14
GPC1-205ENST00000427506 COA7Q96BR5 231 aa22.16■■□□□ 1.14
GPC1-205ENST00000427506 DYNLL2Q96FJ2 89 aa22.16■■□□□ 1.14
GPC1-205ENST00000427506 P2RX7Q99572 595 aaKnown RBP22.16■■□□□ 1.14
GPC1-205ENST00000427506 EMILIN3Q9NT22 766 aa22.16■■□□□ 1.14
GPC1-205ENST00000427506 USP17L12C9JPN9 530 aa22.15■■□□□ 1.14
GPC1-205ENST00000427506 USP17L21D6R901 530 aa22.15■■□□□ 1.14
GPC1-205ENST00000427506 USP14P54578 494 aa22.15■■□□□ 1.14
GPC1-205ENST00000427506 SEPT2Q15019 361 aa22.15■■□□□ 1.14
GPC1-205ENST00000427506 LRRFIP1Q32MZ4 808 aaKnown RBP22.15■■□□□ 1.14
GPC1-205ENST00000427506 SLC44A5Q8NCS7 719 aa22.15■■□□□ 1.14
GPC1-205ENST00000427506 OTUD7AQ8TE49 926 aaPredicted RBP22.15■■□□□ 1.14
GPC1-205ENST00000427506 CYP2D7A0A087X1C5 515 aa22.14■■□□□ 1.13
GPC1-205ENST00000427506 RNF113AO15541 343 aaKnown RBP22.14■■□□□ 1.13
GPC1-205ENST00000427506 GLRX3O76003 335 aaKnown RBP22.14■■□□□ 1.13
GPC1-205ENST00000427506 ZFYP08048 801 aaPredicted RBP22.14■■□□□ 1.13
GPC1-205ENST00000427506 EN2P19622 333 aaPredicted RBP22.14■■□□□ 1.13
GPC1-205ENST00000427506 FLT3LGP49771 235 aa22.14■■□□□ 1.13
GPC1-205ENST00000427506 HERVK_113P62684 666 aa22.14■■□□□ 1.13
GPC1-205ENST00000427506 ACER1Q8TDN7 264 aa22.14■■□□□ 1.13
GPC1-205ENST00000427506 APPBP2Q92624 585 aa22.14■■□□□ 1.13
GPC1-205ENST00000427506 KIAA1683Q9H0B3 1180 aa22.14■■□□□ 1.13
GPC1-205ENST00000427506 TAOK2Q9UL54 1235 aa22.14■■□□□ 1.13
GPC1-205ENST00000427506 MX1P20591 662 aa22.13■■□□□ 1.13
GPC1-205ENST00000427506 C12orf60Q5U649 245 aa22.13■■□□□ 1.13
GPC1-205ENST00000427506 SLAIN1Q8ND83 568 aa22.13■■□□□ 1.13
GPC1-205ENST00000427506 GCC1Q96CN9 775 aa22.13■■□□□ 1.13
GPC1-205ENST00000427506 C12orf42Q96LP6 360 aa22.13■■□□□ 1.13
Retrieved 100 of 20,778 RNA–protein pairs in 75.6 ms