RNA–Protein interactions for RNA: ENST00000427183.6

HDLBP-214, Transcript of high density lipoprotein binding protein, humanhuman

TSL 2 BASIC

Gene HDLBP, Length 6,238 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDLBP-214ENST00000427183 SAP30BPQ9UHR5 308 aaKnown RBP13.94□□□□□ -0.18
HDLBP-214ENST00000427183 SLC8A3P57103 927 aa13.94□□□□□ -0.18
HDLBP-214ENST00000427183 BIRC2Q13490 618 aa13.94□□□□□ -0.18
HDLBP-214ENST00000427183 RPS6KA2Q15349 733 aa13.94□□□□□ -0.18
HDLBP-214ENST00000427183 COPS6Q7L5N1 327 aa13.94□□□□□ -0.18
HDLBP-214ENST00000427183 FCHSD1Q86WN1 690 aa13.94□□□□□ -0.18
HDLBP-214ENST00000427183 SNRPA1P09661 255 aaKnown RBP13.93□□□□□ -0.18
HDLBP-214ENST00000427183 KRT71Q3SY84 523 aa13.93□□□□□ -0.18
HDLBP-214ENST00000427183 IFNL2Q8IZJ0 200 aa13.93□□□□□ -0.18
HDLBP-214ENST00000427183 SHROOM2Q13796 1616 aa13.93□□□□□ -0.18
HDLBP-214ENST00000427183 SLC39A6Q13433 755 aa13.93□□□□□ -0.18
HDLBP-214ENST00000427183 CCDC89Q8N998 374 aa13.93□□□□□ -0.18
HDLBP-214ENST00000427183 IL1RL1Q01638 556 aa13.93□□□□□ -0.18
HDLBP-214ENST00000427183 CAPN12Q6ZSI9 719 aa13.93□□□□□ -0.18
HDLBP-214ENST00000427183 CSGALNACT2Q8N6G5 542 aa13.93□□□□□ -0.18
HDLBP-214ENST00000427183 TTF2Q9UNY4 1162 aaKnown RBP13.93□□□□□ -0.18
HDLBP-214ENST00000427183 DDX39AO00148 427 aaKnown RBP13.93□□□□□ -0.18
HDLBP-214ENST00000427183 CCNT1O60563 726 aaKnown RBP13.93□□□□□ -0.18
HDLBP-214ENST00000427183 FANCCQ00597 558 aa13.93□□□□□ -0.18
HDLBP-214ENST00000427183 RAD51AP2Q09MP3 1159 aa13.93□□□□□ -0.18
HDLBP-214ENST00000427183 PTPROQ16827 1216 aa13.93□□□□□ -0.18
HDLBP-214ENST00000427183 CTAGE3PQ8IX95 158 aa13.93□□□□□ -0.18
HDLBP-214ENST00000427183 CACYBPQ9HB71 228 aaKnown RBP13.93□□□□□ -0.18
HDLBP-214ENST00000427183 ARAP3Q8WWN8 1544 aa13.93□□□□□ -0.18
HDLBP-214ENST00000427183 PPP1R12AO14974 1030 aaPredicted RBP13.93□□□□□ -0.18
HDLBP-214ENST00000427183 INPP1P49441 399 aa13.93□□□□□ -0.18
HDLBP-214ENST00000427183 SLC9C1Q4G0N8 1177 aa13.93□□□□□ -0.18
HDLBP-214ENST00000427183 DCUN1D2Q6PH85 259 aa13.93□□□□□ -0.18
HDLBP-214ENST00000427183 PDCD7Q8N8D1 485 aaKnown RBP13.93□□□□□ -0.18
HDLBP-214ENST00000427183 ZFYVE16Q7Z3T8 1539 aa13.93□□□□□ -0.18
HDLBP-214ENST00000427183 BRAPQ7Z569 592 aa13.92□□□□□ -0.18
HDLBP-214ENST00000427183 VCX3AQ9NNX9 186 aa13.92□□□□□ -0.18
HDLBP-214ENST00000427183 TAB2Q9NYJ8 693 aa13.92□□□□□ -0.18
HDLBP-214ENST00000427183 PTPRTO14522 1441 aa13.92□□□□□ -0.18
HDLBP-214ENST00000427183 STX2P32856 288 aa13.92□□□□□ -0.18
HDLBP-214ENST00000427183 EIF6P56537 245 aaKnown RBP13.92□□□□□ -0.18
HDLBP-214ENST00000427183 CHRNA2Q15822 529 aa13.92□□□□□ -0.18
HDLBP-214ENST00000427183 VWA3BQ502W6 1294 aa13.92□□□□□ -0.18
HDLBP-214ENST00000427183 NPHP3Q7Z494 1330 aa13.92□□□□□ -0.18
HDLBP-214ENST00000427183 PIK3AP1Q6ZUJ8 805 aa13.92□□□□□ -0.18
HDLBP-214ENST00000427183 PDZD8Q8NEN9 1154 aa13.92□□□□□ -0.18
HDLBP-214ENST00000427183 SLF1Q9BQI6 1058 aa13.92□□□□□ -0.18
HDLBP-214ENST00000427183 POLKQ9UBT6 870 aa13.92□□□□□ -0.18
HDLBP-214ENST00000427183 SYNRGQ9UMZ2 1314 aa13.92□□□□□ -0.18
HDLBP-214ENST00000427183 SYNMO15061 1565 aa13.92□□□□□ -0.18
HDLBP-214ENST00000427183 POLR2DO15514 142 aaKnown RBP13.92□□□□□ -0.18
HDLBP-214ENST00000427183 DENND2CQ68D51 928 aa13.92□□□□□ -0.18
HDLBP-214ENST00000427183 SETDB2Q96T68 719 aa13.92□□□□□ -0.18
HDLBP-214ENST00000427183 EFCC1Q9HA90 598 aa13.92□□□□□ -0.18
HDLBP-214ENST00000427183 FAF1Q9UNN5 650 aaPredicted RBP13.92□□□□□ -0.18
HDLBP-214ENST00000427183 RNF113AO15541 343 aaKnown RBP13.92□□□□□ -0.18
HDLBP-214ENST00000427183 TEX13AQ9BXU3 409 aaPredicted RBP13.92□□□□□ -0.18
HDLBP-214ENST00000427183 SEC23IPQ9Y6Y8 1000 aaKnown RBP13.92□□□□□ -0.18
HDLBP-214ENST00000427183 POLR3AO14802 1390 aaPredicted RBP13.91□□□□□ -0.18
HDLBP-214ENST00000427183 PPFIA2O75334 1257 aa13.91□□□□□ -0.18
HDLBP-214ENST00000427183 HS1BP3Q53T59 392 aa13.91□□□□□ -0.18
HDLBP-214ENST00000427183 NACA2Q9H009 215 aa13.91□□□□□ -0.18
HDLBP-214ENST00000427183 RRAGDQ9NQL2 400 aaPredicted RBP13.91□□□□□ -0.18
HDLBP-214ENST00000427183 KDM5AP29375 1690 aaKnown RBP13.91□□□□□ -0.18
HDLBP-214ENST00000427183 TXKP42681 527 aa13.91□□□□□ -0.18
HDLBP-214ENST00000427183 ATP1A2P50993 1020 aa13.91□□□□□ -0.18
HDLBP-214ENST00000427183 SLC12A2P55011 1212 aa13.91□□□□□ -0.18
HDLBP-214ENST00000427183 BANK1Q8NDB2 785 aa13.91□□□□□ -0.18
HDLBP-214ENST00000427183 PARP1P09874 1014 aaKnown RBP13.91□□□□□ -0.18
HDLBP-214ENST00000427183 PAK2Q13177 524 aa13.91□□□□□ -0.18
HDLBP-214ENST00000427183 DYMQ7RTS9 669 aa13.91□□□□□ -0.18
HDLBP-214ENST00000427183 SPDL1Q96EA4 605 aa13.91□□□□□ -0.18
HDLBP-214ENST00000427183 GRM8O00222 908 aa13.91□□□□□ -0.18
HDLBP-214ENST00000427183 FAM173BQ6P4H8 233 aa13.91□□□□□ -0.18
HDLBP-214ENST00000427183 ZNF804AQ7Z570 1209 aa13.91□□□□□ -0.18
HDLBP-214ENST00000427183 FAM71BQ8TC56 605 aa13.91□□□□□ -0.18
HDLBP-214ENST00000427183 SNX21Q969T3 373 aa13.91□□□□□ -0.18
HDLBP-214ENST00000427183 LAMC1P11047 1609 aa13.9□□□□□ -0.18
HDLBP-214ENST00000427183 MAGEA1P43355 309 aa13.9□□□□□ -0.18
HDLBP-214ENST00000427183 HDAC1Q13547 482 aaPredicted RBP13.9□□□□□ -0.18
HDLBP-214ENST00000427183 LGSNQ5TDP6 509 aa13.9□□□□□ -0.18
HDLBP-214ENST00000427183 PHF8Q9UPP1 1060 aa13.9□□□□□ -0.18
HDLBP-214ENST00000427183 KRT19P08727 400 aa13.9□□□□□ -0.18
HDLBP-214ENST00000427183 ATXN8OSP0DMR3 200 aa13.9□□□□□ -0.18
HDLBP-214ENST00000427183 GNGT1P63211 74 aa13.9□□□□□ -0.18
HDLBP-214ENST00000427183 MTX1Q13505 466 aa13.9□□□□□ -0.18
HDLBP-214ENST00000427183 DHX32Q7L7V1 743 aaKnown RBP13.9□□□□□ -0.18
HDLBP-214ENST00000427183 FNBP4Q8N3X1 1017 aaPredicted RBP13.9□□□□□ -0.18
HDLBP-214ENST00000427183 UHMK1Q8TAS1 419 aaKnown RBP13.9□□□□□ -0.18
HDLBP-214ENST00000427183 HINFPQ9BQA5 517 aa13.9□□□□□ -0.18
HDLBP-214ENST00000427183 CALUO43852 315 aaPredicted RBP13.9□□□□□ -0.18
HDLBP-214ENST00000427183 SRGAP1Q7Z6B7 1085 aa13.9□□□□□ -0.18
HDLBP-214ENST00000427183 NELFCDQ8IXH7 590 aa13.9□□□□□ -0.18
HDLBP-214ENST00000427183 DDX41Q9UJV9 622 aaKnown RBP13.9□□□□□ -0.18
HDLBP-214ENST00000427183 CNNM4Q6P4Q7 775 aa13.9□□□□□ -0.18
HDLBP-214ENST00000427183 TAB3Q8N5C8 712 aaPredicted RBP13.9□□□□□ -0.18
HDLBP-214ENST00000427183 NIP7Q9Y221 180 aaKnown RBP eCLIP13.9□□□□□ -0.18
HDLBP-214ENST00000427183 B4DLN1 442 aa13.89□□□□□ -0.19
HDLBP-214ENST00000427183 RNF40O75150 1001 aa13.89□□□□□ -0.19
HDLBP-214ENST00000427183 MRPL12P52815 198 aaKnown RBP13.89□□□□□ -0.19
HDLBP-214ENST00000427183 LRMPQ12912 555 aa13.89□□□□□ -0.19
HDLBP-214ENST00000427183 STAG1Q8WVM7 1258 aa13.89□□□□□ -0.19
HDLBP-214ENST00000427183 TSC1Q92574 1164 aa13.89□□□□□ -0.19
HDLBP-214ENST00000427183 HVCN1Q96D96 273 aa13.89□□□□□ -0.19
HDLBP-214ENST00000427183 TET3O43151 1660 aa13.89□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms