RNA–Protein interactions for RNA: ENST00000426546.6

CCDC107-206, Transcript of coiled-coil domain containing 107, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CCDC107, Length 1,242 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC107-206ENST00000426546 GINM1Q9NU53 330 aa24.37■■□□□ 1.49
CCDC107-206ENST00000426546 RAB11FIP3O75154 756 aa24.36■■□□□ 1.49
CCDC107-206ENST00000426546 WDR18Q9BV38 432 aa24.36■■□□□ 1.49
CCDC107-206ENST00000426546 SAP30BPQ9UHR5 308 aaKnown RBP24.36■■□□□ 1.49
CCDC107-206ENST00000426546 DDX60LQ5H9U9 1706 aaKnown RBP24.35■■□□□ 1.49
CCDC107-206ENST00000426546 HMGCS2P54868 508 aa24.35■■□□□ 1.49
CCDC107-206ENST00000426546 PABPC4Q13310 644 aaKnown RBP eCLIP24.35■■□□□ 1.49
CCDC107-206ENST00000426546 PDE3AQ14432 1141 aa24.35■■□□□ 1.49
CCDC107-206ENST00000426546 CHRDL2Q6WN34 429 aa24.35■■□□□ 1.49
CCDC107-206ENST00000426546 PPIL4Q8WUA2 492 aaKnown RBP eCLIP24.35■■□□□ 1.49
CCDC107-206ENST00000426546 DPF3Q92784 378 aa24.35■■□□□ 1.49
CCDC107-206ENST00000426546 RNF208Q9H0X6 261 aa24.35■■□□□ 1.49
CCDC107-206ENST00000426546 GABRQQ9UN88 632 aa24.35■■□□□ 1.49
CCDC107-206ENST00000426546 APBB1O00213 710 aa24.34■■□□□ 1.49
CCDC107-206ENST00000426546 IFIT2P09913 472 aaKnown RBP24.34■■□□□ 1.49
CCDC107-206ENST00000426546 BIN2Q9UBW5 565 aaPredicted RBP24.34■■□□□ 1.49
CCDC107-206ENST00000426546 USP5P45974 858 aa24.33■■□□□ 1.49
CCDC107-206ENST00000426546 UBXN2AP68543 259 aa24.33■■□□□ 1.49
CCDC107-206ENST00000426546 FAM110CQ1W6H9 321 aa24.33■■□□□ 1.49
CCDC107-206ENST00000426546 SLAIN1Q8ND83 568 aa24.33■■□□□ 1.49
CCDC107-206ENST00000426546 NAV1Q8NEY1 1877 aa24.32■■□□□ 1.48
CCDC107-206ENST00000426546 GCLCP48506 637 aaPredicted RBP24.32■■□□□ 1.48
CCDC107-206ENST00000426546 JAG1P78504 1218 aa24.32■■□□□ 1.48
CCDC107-206ENST00000426546 MTMR2Q13614 643 aa24.32■■□□□ 1.48
CCDC107-206ENST00000426546 ANKRD13CQ8N6S4 541 aa24.32■■□□□ 1.48
CCDC107-206ENST00000426546 EHD4Q9H223 541 aa24.32■■□□□ 1.48
CCDC107-206ENST00000426546 ZBTB21Q9ULJ3 1066 aa24.32■■□□□ 1.48
CCDC107-206ENST00000426546 BACE1P56817 501 aa24.31■■□□□ 1.48
CCDC107-206ENST00000426546 U2AF1L4Q8WU68 220 aaKnown RBP24.31■■□□□ 1.48
CCDC107-206ENST00000426546 RIOK1Q9BRS2 568 aaKnown RBP24.31■■□□□ 1.48
CCDC107-206ENST00000426546 HTATIP2Q9BUP3 242 aa24.31■■□□□ 1.48
CCDC107-206ENST00000426546 UNC93B1Q9H1C4 597 aa24.31■■□□□ 1.48
CCDC107-206ENST00000426546 ASCC2Q9H1I8 757 aaPredicted RBP24.31■■□□□ 1.48
CCDC107-206ENST00000426546 RBM27Q9P2N5 1060 aaKnown RBP24.31■■□□□ 1.48
CCDC107-206ENST00000426546 C19orf81C9J6K1 198 aa24.3■■□□□ 1.48
CCDC107-206ENST00000426546 TNPO2O14787 897 aaKnown RBP24.3■■□□□ 1.48
CCDC107-206ENST00000426546 GDF11O95390 407 aa24.3■■□□□ 1.48
CCDC107-206ENST00000426546 SLC9C2Q5TAH2 1124 aa24.3■■□□□ 1.48
CCDC107-206ENST00000426546 SERPINB13Q9UIV8 391 aa24.3■■□□□ 1.48
CCDC107-206ENST00000426546 DOCK3Q8IZD9 2030 aa24.3■■□□□ 1.48
CCDC107-206ENST00000426546 GOLIM4O00461 696 aa24.29■■□□□ 1.48
CCDC107-206ENST00000426546 PDE6AP16499 860 aa24.29■■□□□ 1.48
CCDC107-206ENST00000426546 FLT3LGP49771 235 aa24.29■■□□□ 1.48
CCDC107-206ENST00000426546 C20orf194Q5TEA3 1177 aa24.29■■□□□ 1.48
CCDC107-206ENST00000426546 TATDN1Q6P1N9 297 aa24.29■■□□□ 1.48
CCDC107-206ENST00000426546 TTC6Q86TZ1 520 aa24.29■■□□□ 1.48
CCDC107-206ENST00000426546 DNAJC2Q99543 621 aaKnown RBP24.29■■□□□ 1.48
CCDC107-206ENST00000426546 TMOD4Q9NZQ9 345 aa24.29■■□□□ 1.48
CCDC107-206ENST00000426546 SZT2Q5T011 3432 aa24.29■■□□□ 1.48
CCDC107-206ENST00000426546 RANBP2P49792 3224 aaKnown RBP24.29■■□□□ 1.48
CCDC107-206ENST00000426546 MAGEB6P1A0A0J9YX57 407 aa24.28■■□□□ 1.48
CCDC107-206ENST00000426546 USP17L10C9JJH3 530 aa24.28■■□□□ 1.48
CCDC107-206ENST00000426546 ADCY3O60266 1144 aa24.28■■□□□ 1.48
CCDC107-206ENST00000426546 IRF5Q13568 498 aa24.28■■□□□ 1.48
CCDC107-206ENST00000426546 SHROOM1Q2M3G4 852 aaPredicted RBP24.28■■□□□ 1.48
CCDC107-206ENST00000426546 PRO3102Q9H379 93 aa24.28■■□□□ 1.48
CCDC107-206ENST00000426546 FARP2O94887 1054 aaPredicted RBP24.27■■□□□ 1.48
CCDC107-206ENST00000426546 SGPL1O95470 568 aa24.27■■□□□ 1.48
CCDC107-206ENST00000426546 ELNP15502 786 aa24.27■■□□□ 1.48
CCDC107-206ENST00000426546 HOXA7P31268 230 aaPredicted RBP24.27■■□□□ 1.48
CCDC107-206ENST00000426546 IRX3P78415 501 aaPredicted RBP24.27■■□□□ 1.48
CCDC107-206ENST00000426546 PXYLP1Q8TE99 480 aa24.27■■□□□ 1.48
CCDC107-206ENST00000426546 COA7Q96BR5 231 aa24.27■■□□□ 1.48
CCDC107-206ENST00000426546 CRNKL1Q9BZJ0 848 aaKnown RBP24.27■■□□□ 1.48
CCDC107-206ENST00000426546 MYH7P12883 1935 aa24.27■■□□□ 1.48
CCDC107-206ENST00000426546 TCRBV5S4A2TA0A5A2 114 aa24.26■■□□□ 1.47
CCDC107-206ENST00000426546 GH2P01242 217 aa24.26■■□□□ 1.47
CCDC107-206ENST00000426546 ATP5JP18859 108 aa24.26■■□□□ 1.47
CCDC107-206ENST00000426546 YTHDC1Q96MU7 727 aaKnown RBP24.26■■□□□ 1.47
CCDC107-206ENST00000426546 ZNF532Q9HCE3 1301 aa24.26■■□□□ 1.47
CCDC107-206ENST00000426546 INHAP05111 366 aa24.25■■□□□ 1.47
CCDC107-206ENST00000426546 LRRCC1Q9C099 1032 aa24.25■■□□□ 1.47
CCDC107-206ENST00000426546 PAG1Q9NWQ8 432 aa24.25■■□□□ 1.47
CCDC107-206ENST00000426546 MORF4L1Q9UBU8 362 aa24.25■■□□□ 1.47
CCDC107-206ENST00000426546 NR2E3Q9Y5X4 410 aa24.25■■□□□ 1.47
CCDC107-206ENST00000426546 EDC3Q96F86 508 aaKnown RBP24.24■■□□□ 1.47
CCDC107-206ENST00000426546 BCL11AQ9H165 835 aa24.24■■□□□ 1.47
CCDC107-206ENST00000426546 PLCD1P51178 756 aa24.23■■□□□ 1.47
CCDC107-206ENST00000426546 CERKLQ49MI3 558 aaPredicted RBP24.23■■□□□ 1.47
CCDC107-206ENST00000426546 HAUS7Q99871 368 aa24.23■■□□□ 1.47
CCDC107-206ENST00000426546 BOLA2Q9H3K6 86 aa24.23■■□□□ 1.47
CCDC107-206ENST00000426546 POLR3DP05423 398 aaPredicted RBP24.22■■□□□ 1.47
CCDC107-206ENST00000426546 HERVK_113P62684 666 aa24.22■■□□□ 1.47
CCDC107-206ENST00000426546 USP17L2Q6R6M4 530 aa24.22■■□□□ 1.47
CCDC107-206ENST00000426546 DEFB118Q96PH6 123 aa24.22■■□□□ 1.47
CCDC107-206ENST00000426546 DDX24Q9GZR7 859 aaKnown RBP eCLIP24.22■■□□□ 1.47
CCDC107-206ENST00000426546 PAK6Q9NQU5 681 aaPredicted RBP24.22■■□□□ 1.47
CCDC107-206ENST00000426546 EMILIN3Q9NT22 766 aa24.22■■□□□ 1.47
CCDC107-206ENST00000426546 SHMT1P34896 483 aa24.21■■□□□ 1.47
CCDC107-206ENST00000426546 ADD2P35612 726 aa24.21■■□□□ 1.47
CCDC107-206ENST00000426546 GABPAQ06546 454 aa24.21■■□□□ 1.47
CCDC107-206ENST00000426546 ABCB5Q2M3G0 1257 aa24.21■■□□□ 1.47
CCDC107-206ENST00000426546 LCORLQ8N3X6 602 aa24.21■■□□□ 1.47
CCDC107-206ENST00000426546 GTF3C2Q8WUA4 911 aaPredicted RBP24.21■■□□□ 1.47
CCDC107-206ENST00000426546 C12orf42Q96LP6 360 aa24.21■■□□□ 1.47
CCDC107-206ENST00000426546 P2RX7Q99572 595 aaKnown RBP24.21■■□□□ 1.47
CCDC107-206ENST00000426546 MCM9Q9NXL9 1143 aa24.21■■□□□ 1.47
CCDC107-206ENST00000426546 MYH8P13535 1937 aa24.21■■□□□ 1.47
CCDC107-206ENST00000426546 PLXNB2O15031 1838 aa24.21■■□□□ 1.47
CCDC107-206ENST00000426546 CAPN2P17655 700 aa24.2■■□□□ 1.46
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms