RNA–Protein interactions for RNA: ENST00000426248.7

PKP4-205, Transcript of plakophilin 4, humanhuman

TSL 1 (best)

Gene PKP4, Length 4,134 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKP4-205ENST00000426248 MFSD14BQ5SR56 506 aa18.2■□□□□ 0.5
PKP4-205ENST00000426248 DHX32Q7L7V1 743 aaKnown RBP18.2■□□□□ 0.5
PKP4-205ENST00000426248 TMEM87AQ8NBN3 555 aa18.2■□□□□ 0.5
PKP4-205ENST00000426248 PRKAB2O43741 272 aa18.2■□□□□ 0.5
PKP4-205ENST00000426248 ADD2P35612 726 aa18.2■□□□□ 0.5
PKP4-205ENST00000426248 ZNF827Q17R98 1081 aa18.2■□□□□ 0.5
PKP4-205ENST00000426248 PLA2G4DQ86XP0 818 aa18.19■□□□□ 0.5
PKP4-205ENST00000426248 ORC3Q9UBD5 711 aaPredicted RBP18.19■□□□□ 0.5
PKP4-205ENST00000426248 MTMR6Q9Y217 621 aa18.19■□□□□ 0.5
PKP4-205ENST00000426248 RPS6KB1P23443 525 aa18.19■□□□□ 0.5
PKP4-205ENST00000426248 KLRK1P26718 216 aa18.19■□□□□ 0.5
PKP4-205ENST00000426248 CDC37L1Q7L3B6 337 aa18.19■□□□□ 0.5
PKP4-205ENST00000426248 PACS2Q86VP3 889 aa18.19■□□□□ 0.5
PKP4-205ENST00000426248 WDR66Q8TBY9 1149 aa18.19■□□□□ 0.5
PKP4-205ENST00000426248 FAM84BQ96KN1 310 aaPredicted RBP18.19■□□□□ 0.5
PKP4-205ENST00000426248 CHRNA5P30532 468 aa18.18■□□□□ 0.5
PKP4-205ENST00000426248 MAGEA9P43362 315 aa18.18■□□□□ 0.5
PKP4-205ENST00000426248 STX1AQ16623 288 aa18.18■□□□□ 0.5
PKP4-205ENST00000426248 PPP1R13BQ96KQ4 1090 aa18.18■□□□□ 0.5
PKP4-205ENST00000426248 CENPHQ9H3R5 247 aa18.18■□□□□ 0.5
PKP4-205ENST00000426248 E7EWF7 191 aa18.18■□□□□ 0.5
PKP4-205ENST00000426248 ATP2B4P23634 1241 aa18.18■□□□□ 0.5
PKP4-205ENST00000426248 JAKMIP3Q5VZ66 844 aa18.18■□□□□ 0.5
PKP4-205ENST00000426248 DSCC1Q9BVC3 393 aa18.18■□□□□ 0.5
PKP4-205ENST00000426248 RNF216Q9NWF9 866 aaPredicted RBP18.18■□□□□ 0.5
PKP4-205ENST00000426248 DYNLL1P63167 89 aaKnown RBP18.18■□□□□ 0.5
PKP4-205ENST00000426248 TDRD7Q8NHU6 1098 aaKnown RBP18.18■□□□□ 0.5
PKP4-205ENST00000426248 CXorf56Q9H5V9 222 aa18.18■□□□□ 0.5
PKP4-205ENST00000426248 H2AFXP16104 143 aaPredicted RBP18.17■□□□□ 0.5
PKP4-205ENST00000426248 ME1P48163 572 aa18.17■□□□□ 0.5
PKP4-205ENST00000426248 NECTIN1Q15223 517 aa18.17■□□□□ 0.5
PKP4-205ENST00000426248 RNF41Q9H4P4 317 aaPredicted RBP18.17■□□□□ 0.5
PKP4-205ENST00000426248 SAP30BPQ9UHR5 308 aaKnown RBP18.17■□□□□ 0.5
PKP4-205ENST00000426248 LEMD3Q9Y2U8 911 aa18.17■□□□□ 0.5
PKP4-205ENST00000426248 SERPINC1P01008 464 aa18.17■□□□□ 0.5
PKP4-205ENST00000426248 CHRM1P11229 460 aaPredicted RBP18.17■□□□□ 0.5
PKP4-205ENST00000426248 PRDX5P30044 214 aa18.17■□□□□ 0.5
PKP4-205ENST00000426248 PDE11AQ9HCR9 933 aa18.17■□□□□ 0.5
PKP4-205ENST00000426248 IFNKQ9P0W0 207 aa18.17■□□□□ 0.5
PKP4-205ENST00000426248 TSPY2A6NKD2 308 aa18.17■□□□□ 0.5
PKP4-205ENST00000426248 LIG3P49916 1009 aa18.17■□□□□ 0.5
PKP4-205ENST00000426248 UBE3CQ15386 1083 aa18.17■□□□□ 0.5
PKP4-205ENST00000426248 EYA3Q99504 573 aa18.17■□□□□ 0.5
PKP4-205ENST00000426248 SLC12A7Q9Y666 1083 aa18.17■□□□□ 0.5
PKP4-205ENST00000426248 PPP2R5AQ15172 486 aa18.17■□□□□ 0.5
PKP4-205ENST00000426248 C11orf57Q6ZUT1 292 aaPredicted RBP18.17■□□□□ 0.5
PKP4-205ENST00000426248 CLSTN2Q9H4D0 955 aa18.17■□□□□ 0.5
PKP4-205ENST00000426248 DBNDD1Q9H9R9 158 aa18.17■□□□□ 0.5
PKP4-205ENST00000426248 LARGE1O95461 756 aa18.16■□□□□ 0.5
PKP4-205ENST00000426248 DIXDC1Q155Q3 683 aa18.16■□□□□ 0.5
PKP4-205ENST00000426248 SLC15A2Q16348 729 aa18.16■□□□□ 0.5
PKP4-205ENST00000426248 IQCA1Q86XH1 822 aa18.16■□□□□ 0.5
PKP4-205ENST00000426248 NCOA5Q9HCD5 579 aaKnown RBP18.16■□□□□ 0.5
PKP4-205ENST00000426248 ANO10Q9NW15 660 aa18.16■□□□□ 0.5
PKP4-205ENST00000426248 PUF60Q9UHX1 559 aaKnown RBP18.16■□□□□ 0.5
PKP4-205ENST00000426248 GSTO1P78417 241 aa18.16■□□□□ 0.5
PKP4-205ENST00000426248 RASSF8Q8NHQ8 419 aa18.16■□□□□ 0.5
PKP4-205ENST00000426248 PKD1L3Q7Z443 1732 aa18.16■□□□□ 0.5
PKP4-205ENST00000426248 CCP110O43303 1012 aa18.16■□□□□ 0.5
PKP4-205ENST00000426248 GNAT2P19087 354 aa18.16■□□□□ 0.5
PKP4-205ENST00000426248 USP8P40818 1118 aa18.16■□□□□ 0.5
PKP4-205ENST00000426248 GPSM2P81274 684 aa18.16■□□□□ 0.5
PKP4-205ENST00000426248 OLFM4Q6UX06 510 aa18.16■□□□□ 0.5
PKP4-205ENST00000426248 SLF2Q8IX21 1173 aa18.16■□□□□ 0.5
PKP4-205ENST00000426248 ZNF444Q8N0Y2 327 aaPredicted RBP18.16■□□□□ 0.5
PKP4-205ENST00000426248 LCORLQ8N3X6 602 aa18.16■□□□□ 0.5
PKP4-205ENST00000426248 DDR1Q08345 913 aa18.15■□□□□ 0.5
PKP4-205ENST00000426248 SLC10A5Q5PT55 438 aa18.15■□□□□ 0.5
PKP4-205ENST00000426248 IFNL3Q8IZI9 196 aa18.15■□□□□ 0.5
PKP4-205ENST00000426248 ZNF609O15014 1411 aa18.15■□□□□ 0.5
PKP4-205ENST00000426248 ATRNO75882 1429 aa18.15■□□□□ 0.5
PKP4-205ENST00000426248 PLSCR1O15162 318 aa18.15■□□□□ 0.5
PKP4-205ENST00000426248 NYAP1Q6ZVC0 841 aa18.15■□□□□ 0.5
PKP4-205ENST00000426248 BRIP1Q9BX63 1249 aa18.15■□□□□ 0.5
PKP4-205ENST00000426248 SCNN1DP51172 638 aa18.15■□□□□ 0.5
PKP4-205ENST00000426248 CFAP100Q494V2 611 aa18.15■□□□□ 0.5
PKP4-205ENST00000426248 TAF6LQ9Y6J9 622 aa18.15■□□□□ 0.5
PKP4-205ENST00000426248 NPR1P16066 1061 aa18.14■□□□□ 0.5
PKP4-205ENST00000426248 TXNRD3Q86VQ6 643 aa18.14■□□□□ 0.5
PKP4-205ENST00000426248 PROM2Q8N271 834 aa18.14■□□□□ 0.5
PKP4-205ENST00000426248 SUFUQ9UMX1 484 aa18.14■□□□□ 0.5
PKP4-205ENST00000426248 ELP1O95163 1332 aa18.14■□□□□ 0.49
PKP4-205ENST00000426248 USP17L12C9JPN9 530 aa18.14■□□□□ 0.49
PKP4-205ENST00000426248 USP17L21D6R901 530 aa18.14■□□□□ 0.49
PKP4-205ENST00000426248 MPHOSPH10O00566 681 aaKnown RBP18.14■□□□□ 0.49
PKP4-205ENST00000426248 ERLIN1O75477 346 aa18.14■□□□□ 0.49
PKP4-205ENST00000426248 PPP2R3AQ06190 1150 aa18.14■□□□□ 0.49
PKP4-205ENST00000426248 PPIL4Q8WUA2 492 aaKnown RBP eCLIP18.14■□□□□ 0.49
PKP4-205ENST00000426248 EXOC4Q96A65 974 aa18.14■□□□□ 0.49
PKP4-205ENST00000426248 ZSWIM6Q9HCJ5 1215 aa18.14■□□□□ 0.49
PKP4-205ENST00000426248 STX8Q9UNK0 236 aa18.14■□□□□ 0.49
PKP4-205ENST00000426248 RPAP1Q9BWH6 1393 aaPredicted RBP18.14■□□□□ 0.49
PKP4-205ENST00000426248 C5P01031 1676 aa18.14■□□□□ 0.49
PKP4-205ENST00000426248 ETF1P62495 437 aaKnown RBP18.14■□□□□ 0.49
PKP4-205ENST00000426248 HSP90AA4PQ58FG1 418 aa18.14■□□□□ 0.49
PKP4-205ENST00000426248 DNAJC21Q5F1R6 531 aaKnown RBP18.14■□□□□ 0.49
PKP4-205ENST00000426248 FOXR1Q6PIV2 292 aa18.14■□□□□ 0.49
PKP4-205ENST00000426248 ACBD3Q9H3P7 528 aa18.14■□□□□ 0.49
PKP4-205ENST00000426248 GOLGA8AA7E2F4 631 aa18.13■□□□□ 0.49
PKP4-205ENST00000426248 PTPN21Q16825 1174 aa18.13■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms