RNA–Protein interactions for RNA: ENST00000426196.5

HDAC6-206, Transcript of histone deacetylase 6, humanhuman

TSL 3

Gene HDAC6, Length 882 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-206ENST00000426196 MSCO60682 206 aa17.58■□□□□ 0.4
HDAC6-206ENST00000426196 PEX10O60683 326 aa17.58■□□□□ 0.4
HDAC6-206ENST00000426196 ASNSP08243 561 aa17.58■□□□□ 0.4
HDAC6-206ENST00000426196 FOSL2P15408 326 aa17.58■□□□□ 0.4
HDAC6-206ENST00000426196 ADORA1P30542 326 aa17.58■□□□□ 0.4
HDAC6-206ENST00000426196 IL15P40933 162 aaPredicted RBP17.58■□□□□ 0.4
HDAC6-206ENST00000426196 RTP1P59025 263 aa17.58■□□□□ 0.4
HDAC6-206ENST00000426196 MECOMQ03112 1051 aa17.58■□□□□ 0.4
HDAC6-206ENST00000426196 PAGR1Q9BTK6 254 aa17.58■□□□□ 0.4
HDAC6-206ENST00000426196 PORCNQ9H237 461 aa17.58■□□□□ 0.4
HDAC6-206ENST00000426196 RLFQ13129 1914 aa17.58■□□□□ 0.4
HDAC6-206ENST00000426196 C19orf81C9J6K1 198 aa17.57■□□□□ 0.4
HDAC6-206ENST00000426196 GLRX3O76003 335 aaKnown RBP17.57■□□□□ 0.4
HDAC6-206ENST00000426196 LDHCP07864 332 aa17.57■□□□□ 0.4
HDAC6-206ENST00000426196 GSTO1P78417 241 aa17.57■□□□□ 0.4
HDAC6-206ENST00000426196 RRP1BQ14684 758 aaKnown RBP17.57■□□□□ 0.4
HDAC6-206ENST00000426196 SHHQ15465 462 aa17.57■□□□□ 0.4
HDAC6-206ENST00000426196 RBPJLQ9UBG7 517 aa17.57■□□□□ 0.4
HDAC6-206ENST00000426196 MYO9BQ13459 2157 aa17.56■□□□□ 0.4
HDAC6-206ENST00000426196 DNM1LO00429 736 aa17.56■□□□□ 0.4
HDAC6-206ENST00000426196 COL9A1P20849 921 aa17.56■□□□□ 0.4
HDAC6-206ENST00000426196 SMAD3P84022 425 aaKnown RBP17.56■□□□□ 0.4
HDAC6-206ENST00000426196 MAP2K5Q13163 448 aa17.56■□□□□ 0.4
HDAC6-206ENST00000426196 MRPL50Q8N5N7 158 aaKnown RBP17.56■□□□□ 0.4
HDAC6-206ENST00000426196 LPAR1Q92633 364 aa17.56■□□□□ 0.4
HDAC6-206ENST00000426196 DDX20Q9UHI6 824 aaKnown RBP17.56■□□□□ 0.4
HDAC6-206ENST00000426196 ATP11BQ9Y2G3 1177 aa17.56■□□□□ 0.4
HDAC6-206ENST00000426196 SIPA1L1O43166 1804 aa17.56■□□□□ 0.4
HDAC6-206ENST00000426196 USP17L10C9JJH3 530 aa17.55■□□□□ 0.4
HDAC6-206ENST00000426196 CNGA1P29973 690 aa17.55■□□□□ 0.4
HDAC6-206ENST00000426196 Q3C1V9 767 aa17.55■□□□□ 0.4
HDAC6-206ENST00000426196 TEX11Q8IYF3 940 aa17.55■□□□□ 0.4
HDAC6-206ENST00000426196 EDC3Q96F86 508 aaKnown RBP17.55■□□□□ 0.4
HDAC6-206ENST00000426196 PI4KBQ9UBF8 816 aa17.55■□□□□ 0.4
HDAC6-206ENST00000426196 UBTFL1P0CB47 393 aaPredicted RBP17.54■□□□□ 0.4
HDAC6-206ENST00000426196 CCNA1P78396 465 aa17.54■□□□□ 0.4
HDAC6-206ENST00000426196 MVPQ14764 893 aaKnown RBP17.54■□□□□ 0.4
HDAC6-206ENST00000426196 C9orf50Q5SZB4 431 aa17.54■□□□□ 0.4
HDAC6-206ENST00000426196 DHX36Q9H2U1 1008 aaKnown RBP17.54■□□□□ 0.4
HDAC6-206ENST00000426196 TTYH1Q9H313 450 aaPredicted RBP17.54■□□□□ 0.4
HDAC6-206ENST00000426196 PRDM5Q9NQX1 630 aaPredicted RBP17.54■□□□□ 0.4
HDAC6-206ENST00000426196 TJAP1Q5JTD0 557 aa17.53■□□□□ 0.4
HDAC6-206ENST00000426196 WDR78Q5VTH9 848 aa17.53■□□□□ 0.4
HDAC6-206ENST00000426196 ZNF384Q8TF68 577 aa17.53■□□□□ 0.4
HDAC6-206ENST00000426196 NOL10Q9BSC4 688 aaKnown RBP17.53■□□□□ 0.4
HDAC6-206ENST00000426196 TRIM34Q9BYJ4 488 aa17.53■□□□□ 0.4
HDAC6-206ENST00000426196 MRS2Q9HD23 443 aa17.53■□□□□ 0.4
HDAC6-206ENST00000426196 GINM1Q9NU53 330 aa17.53■□□□□ 0.4
HDAC6-206ENST00000426196 TMEM265A0A087WTH1 108 aa17.52■□□□□ 0.4
HDAC6-206ENST00000426196 KBTBD13C9JR72 458 aa17.52■□□□□ 0.4
HDAC6-206ENST00000426196 TNFRSF10AO00220 468 aa17.52■□□□□ 0.4
HDAC6-206ENST00000426196 TIMM10P62072 90 aa17.52■□□□□ 0.4
HDAC6-206ENST00000426196 ATP2B2Q01814 1243 aa17.52■□□□□ 0.4
HDAC6-206ENST00000426196 NSUN4Q96CB9 384 aaKnown RBP17.52■□□□□ 0.4
HDAC6-206ENST00000426196 PA2G4Q9UQ80 394 aaKnown RBP17.52■□□□□ 0.4
HDAC6-206ENST00000426196 RABGAP1Q9Y3P9 1069 aa17.52■□□□□ 0.4
HDAC6-206ENST00000426196 IVNS1ABPQ9Y6Y0 642 aa17.52■□□□□ 0.4
HDAC6-206ENST00000426196 CDK5RAP2Q96SN8 1893 aa17.52■□□□□ 0.39
HDAC6-206ENST00000426196 SLC15A5A6NIM6 579 aa17.51■□□□□ 0.39
HDAC6-206ENST00000426196 USP17L2Q6R6M4 530 aa17.51■□□□□ 0.39
HDAC6-206ENST00000426196 CRACR2BQ8N4Y2 399 aaPredicted RBP17.51■□□□□ 0.39
HDAC6-206ENST00000426196 ARRDC4Q8NCT1 418 aa17.51■□□□□ 0.39
HDAC6-206ENST00000426196 BADQ92934 168 aa17.51■□□□□ 0.39
HDAC6-206ENST00000426196 XAGE2Q96GT9 111 aa17.51■□□□□ 0.39
HDAC6-206ENST00000426196 FLRT1Q9NZU1 646 aa17.51■□□□□ 0.39
HDAC6-206ENST00000426196 RAI14Q9P0K7 980 aa17.51■□□□□ 0.39
HDAC6-206ENST00000426196 AKAP2Q9Y2D5 859 aa17.51■□□□□ 0.39
HDAC6-206ENST00000426196 FOCADQ5VW36 1801 aa17.51■□□□□ 0.39
HDAC6-206ENST00000426196 A0A1B0GUL7 405 aa17.5■□□□□ 0.39
HDAC6-206ENST00000426196 GJC2Q5T442 439 aaPredicted RBP17.5■□□□□ 0.39
HDAC6-206ENST00000426196 SLC39A5Q6ZMH5 540 aa17.5■□□□□ 0.39
HDAC6-206ENST00000426196 COPRSQ9NQ92 184 aa17.5■□□□□ 0.39
HDAC6-206ENST00000426196 ZBTB21Q9ULJ3 1066 aa17.5■□□□□ 0.39
HDAC6-206ENST00000426196 HDAC5Q9UQL6 1122 aa17.5■□□□□ 0.39
HDAC6-206ENST00000426196 NDUFB9Q9Y6M9 179 aa17.5■□□□□ 0.39
HDAC6-206ENST00000426196 GDF11O95390 407 aa17.49■□□□□ 0.39
HDAC6-206ENST00000426196 HOXC6P09630 235 aa17.49■□□□□ 0.39
HDAC6-206ENST00000426196 PTPREP23469 700 aa17.49■□□□□ 0.39
HDAC6-206ENST00000426196 SH3RF3Q8TEJ3 882 aaPredicted RBP17.49■□□□□ 0.39
HDAC6-206ENST00000426196 EMILIN3Q9NT22 766 aa17.49■□□□□ 0.39
HDAC6-206ENST00000426196 HMG20BQ9P0W2 317 aa17.49■□□□□ 0.39
HDAC6-206ENST00000426196 USP17L15C9J2P7 530 aa17.48■□□□□ 0.39
HDAC6-206ENST00000426196 USP17L13C9JLJ4 530 aa17.48■□□□□ 0.39
HDAC6-206ENST00000426196 USP17L11C9JVI0 530 aa17.48■□□□□ 0.39
HDAC6-206ENST00000426196 USP17L18D6R9N7 530 aa17.48■□□□□ 0.39
HDAC6-206ENST00000426196 USP17L22D6RA61 530 aa17.48■□□□□ 0.39
HDAC6-206ENST00000426196 USP17L17D6RBQ6 530 aa17.48■□□□□ 0.39
HDAC6-206ENST00000426196 USP17L19D6RCP7 530 aa17.48■□□□□ 0.39
HDAC6-206ENST00000426196 USP17L20D6RJB6 530 aa17.48■□□□□ 0.39
HDAC6-206ENST00000426196 BAG3O95817 575 aa17.48■□□□□ 0.39
HDAC6-206ENST00000426196 PLCG2P16885 1265 aa17.48■□□□□ 0.39
HDAC6-206ENST00000426196 CYP2C19P33261 490 aa17.48■□□□□ 0.39
HDAC6-206ENST00000426196 JAG1P78504 1218 aa17.48■□□□□ 0.39
HDAC6-206ENST00000426196 USP17L24Q0WX57 530 aa17.48■□□□□ 0.39
HDAC6-206ENST00000426196 GRB14Q14449 540 aa17.48■□□□□ 0.39
HDAC6-206ENST00000426196 TRIM60Q495X7 471 aa17.48■□□□□ 0.39
HDAC6-206ENST00000426196 GORABQ5T7V8 394 aa17.48■□□□□ 0.39
HDAC6-206ENST00000426196 POTEEQ6S8J3 1075 aa17.48■□□□□ 0.39
HDAC6-206ENST00000426196 TBC1D9Q6ZT07 1266 aa17.48■□□□□ 0.39
HDAC6-206ENST00000426196 FOXP4Q8IVH2 680 aaPredicted RBP17.48■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 50.3 ms