RNA–Protein interactions for RNA: ENST00000425443.6

COL12A1-205, Transcript of collagen type XII alpha 1 chain, humanhuman

TSL 5

Gene COL12A1, Length 3,135 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL12A1-205ENST00000425443 SLU7O95391 586 aaKnown RBP14.88□□□□□ -0.03
COL12A1-205ENST00000425443 SFPQP23246 707 aaKnown RBP eCLIP14.88□□□□□ -0.03
COL12A1-205ENST00000425443 AKAP17AQ02040 695 aaKnown RBP14.88□□□□□ -0.03
COL12A1-205ENST00000425443 PDE4BQ07343 736 aa14.88□□□□□ -0.03
COL12A1-205ENST00000425443 CFAP100Q494V2 611 aa14.88□□□□□ -0.03
COL12A1-205ENST00000425443 ERFEQ4G0M1 354 aa14.88□□□□□ -0.03
COL12A1-205ENST00000425443 CCDC93Q567U6 631 aa14.88□□□□□ -0.03
COL12A1-205ENST00000425443 FAM217BQ9NTX9 383 aaPredicted RBP14.88□□□□□ -0.03
COL12A1-205ENST00000425443 HPSEQ9Y251 543 aa14.88□□□□□ -0.03
COL12A1-205ENST00000425443 SLFN14P0C7P3 912 aa14.88□□□□□ -0.03
COL12A1-205ENST00000425443 GUCY1A2P33402 732 aa14.88□□□□□ -0.03
COL12A1-205ENST00000425443 GRIN1Q05586 938 aa14.88□□□□□ -0.03
COL12A1-205ENST00000425443 METTL16Q86W50 562 aaKnown RBP14.88□□□□□ -0.03
COL12A1-205ENST00000425443 HOMER1Q86YM7 354 aa14.88□□□□□ -0.03
COL12A1-205ENST00000425443 ZNF827Q17R98 1081 aa14.87□□□□□ -0.03
COL12A1-205ENST00000425443 LONRF3Q496Y0 759 aa14.87□□□□□ -0.03
COL12A1-205ENST00000425443 L2HGDHQ9H9P8 463 aa14.87□□□□□ -0.03
COL12A1-205ENST00000425443 INTS13Q9NVM9 706 aa14.87□□□□□ -0.03
COL12A1-205ENST00000425443 FAM53CQ9NYF3 392 aa14.87□□□□□ -0.03
COL12A1-205ENST00000425443 ROBO1Q9Y6N7 1651 aa14.87□□□□□ -0.03
COL12A1-205ENST00000425443 CCDC196A0A1B0GTZ2 297 aa14.87□□□□□ -0.03
COL12A1-205ENST00000425443 BTBD18B2RXH4 712 aa14.87□□□□□ -0.03
COL12A1-205ENST00000425443 SMIM22K7EJ46 135 aa14.87□□□□□ -0.03
COL12A1-205ENST00000425443 SEMA3FQ13275 785 aa14.87□□□□□ -0.03
COL12A1-205ENST00000425443 TUBE1Q9UJT0 475 aa14.87□□□□□ -0.03
COL12A1-205ENST00000425443 PPARAQ07869 468 aa14.86□□□□□ -0.03
COL12A1-205ENST00000425443 NTRK3Q16288 839 aa14.86□□□□□ -0.03
COL12A1-205ENST00000425443 FAM98CQ17RN3 349 aaKnown RBP14.86□□□□□ -0.03
COL12A1-205ENST00000425443 TMTC2Q8N394 836 aa14.86□□□□□ -0.03
COL12A1-205ENST00000425443 GEMIN8Q9NWZ8 242 aaKnown RBP14.86□□□□□ -0.03
COL12A1-205ENST00000425443 GRAMD1CQ8IYS0 662 aa14.86□□□□□ -0.03
COL12A1-205ENST00000425443 CAPN2P17655 700 aa14.86□□□□□ -0.03
COL12A1-205ENST00000425443 SLC4A8Q2Y0W8 1093 aa14.86□□□□□ -0.03
COL12A1-205ENST00000425443 TRIM65Q6PJ69 517 aa14.86□□□□□ -0.03
COL12A1-205ENST00000425443 CCDC150Q8NCX0 1101 aa14.86□□□□□ -0.03
COL12A1-205ENST00000425443 CNNM3Q8NE01 707 aa14.86□□□□□ -0.03
COL12A1-205ENST00000425443 STAG1Q8WVM7 1258 aa14.86□□□□□ -0.03
COL12A1-205ENST00000425443 ESR2Q92731 530 aa14.86□□□□□ -0.03
COL12A1-205ENST00000425443 GNL3Q9BVP2 549 aaKnown RBP eCLIP14.86□□□□□ -0.03
COL12A1-205ENST00000425443 FANCLQ9NW38 375 aa14.86□□□□□ -0.03
COL12A1-205ENST00000425443 PNPLA7Q6ZV29 1317 aa14.85□□□□□ -0.03
COL12A1-205ENST00000425443 FMNL1O95466 1100 aaPredicted RBP14.85□□□□□ -0.03
COL12A1-205ENST00000425443 SMIM5Q71RC9 77 aa14.85□□□□□ -0.03
COL12A1-205ENST00000425443 WTIPA6NIX2 430 aaPredicted RBP14.85□□□□□ -0.03
COL12A1-205ENST00000425443 IFNAR1P17181 557 aa14.85□□□□□ -0.03
COL12A1-205ENST00000425443 DIS3L2Q8IYB7 885 aaKnown RBP14.85□□□□□ -0.03
COL12A1-205ENST00000425443 SPATA31A5Q5VU36 1347 aa14.84□□□□□ -0.03
COL12A1-205ENST00000425443 SPATA31A7Q8IWB4 1347 aa14.84□□□□□ -0.03
COL12A1-205ENST00000425443 PSDA5PKW4 1024 aaPredicted RBP14.84□□□□□ -0.03
COL12A1-205ENST00000425443 UBASH3AP57075 661 aa14.84□□□□□ -0.03
COL12A1-205ENST00000425443 NR5A1Q13285 461 aa14.84□□□□□ -0.03
COL12A1-205ENST00000425443 NOSTRINQ8IVI9 506 aa14.84□□□□□ -0.03
COL12A1-205ENST00000425443 TRMT44Q8IYL2 757 aaKnown RBP14.84□□□□□ -0.03
COL12A1-205ENST00000425443 EPC1Q9H2F5 836 aa14.84□□□□□ -0.03
COL12A1-205ENST00000425443 PPP6R2O75170 966 aa14.84□□□□□ -0.03
COL12A1-205ENST00000425443 SLC20A2Q08357 652 aa14.84□□□□□ -0.03
COL12A1-205ENST00000425443 RESP18Q5W5W9 173 aa14.84□□□□□ -0.03
COL12A1-205ENST00000425443 CLEC4GQ6UXB4 293 aa14.84□□□□□ -0.03
COL12A1-205ENST00000425443 TMEM139Q8IV31 216 aa14.84□□□□□ -0.03
COL12A1-205ENST00000425443 ZNF654Q8IZM8 581 aa14.84□□□□□ -0.03
COL12A1-205ENST00000425443 DNAI1Q9UI46 699 aa14.84□□□□□ -0.03
COL12A1-205ENST00000425443 SLIT2O94813 1529 aa14.84□□□□□ -0.03
COL12A1-205ENST00000425443 GOLGB1Q14789 3259 aaKnown RBP14.84□□□□□ -0.03
COL12A1-205ENST00000425443 IKBKBO14920 756 aa14.83□□□□□ -0.03
COL12A1-205ENST00000425443 UBE4AQ14139 1066 aa14.83□□□□□ -0.03
COL12A1-205ENST00000425443 CCDC24Q8N4L8 307 aa14.83□□□□□ -0.03
COL12A1-205ENST00000425443 FANCBQ8NB91 859 aa14.83□□□□□ -0.03
COL12A1-205ENST00000425443 SH3BP1Q9Y3L3 701 aa14.83□□□□□ -0.03
COL12A1-205ENST00000425443 PCDHA5Q9Y5H7 936 aa14.83□□□□□ -0.03
COL12A1-205ENST00000425443 PRDM1O75626 825 aa14.83□□□□□ -0.04
COL12A1-205ENST00000425443 H2AFXP16104 143 aaPredicted RBP14.83□□□□□ -0.04
COL12A1-205ENST00000425443 ADGRA1Q86SQ6 560 aa14.83□□□□□ -0.04
COL12A1-205ENST00000425443 REXO1L1PQ8IX06 675 aa14.83□□□□□ -0.04
COL12A1-205ENST00000425443 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP14.83□□□□□ -0.04
COL12A1-205ENST00000425443 TNKSO95271 1327 aa14.83□□□□□ -0.04
COL12A1-205ENST00000425443 DEXIO95424 95 aa14.83□□□□□ -0.04
COL12A1-205ENST00000425443 XBP1P17861 261 aa14.83□□□□□ -0.04
COL12A1-205ENST00000425443 TOB1P50616 345 aaPredicted RBP14.83□□□□□ -0.04
COL12A1-205ENST00000425443 DYNLL1P63167 89 aaKnown RBP14.83□□□□□ -0.04
COL12A1-205ENST00000425443 OLFM4Q6UX06 510 aa14.83□□□□□ -0.04
COL12A1-205ENST00000425443 C3orf67Q6ZVT6 689 aa14.83□□□□□ -0.04
COL12A1-205ENST00000425443 BSDC1Q9NW68 430 aaPredicted RBP14.83□□□□□ -0.04
COL12A1-205ENST00000425443 KCNH3Q9ULD8 1083 aa14.83□□□□□ -0.04
COL12A1-205ENST00000425443 CLSTN1O94985 981 aa14.82□□□□□ -0.04
COL12A1-205ENST00000425443 MYL5Q02045 173 aa14.82□□□□□ -0.04
COL12A1-205ENST00000425443 NBPF5PQ86XG9 351 aaPredicted RBP14.82□□□□□ -0.04
COL12A1-205ENST00000425443 IQCA1Q86XH1 822 aa14.82□□□□□ -0.04
COL12A1-205ENST00000425443 KRT222Q8N1A0 295 aa14.82□□□□□ -0.04
COL12A1-205ENST00000425443 KRI1Q8N9T8 703 aaKnown RBP14.82□□□□□ -0.04
COL12A1-205ENST00000425443 LINC00116Q8NCU8 138 aa14.82□□□□□ -0.04
COL12A1-205ENST00000425443 NGLY1Q96IV0 654 aa14.82□□□□□ -0.04
COL12A1-205ENST00000425443 NLRP3Q96P20 1036 aa14.82□□□□□ -0.04
COL12A1-205ENST00000425443 MED15Q96RN5 788 aa14.82□□□□□ -0.04
COL12A1-205ENST00000425443 SETDB2Q96T68 719 aa14.82□□□□□ -0.04
COL12A1-205ENST00000425443 HOOK1Q9UJC3 728 aaKnown RBP14.82□□□□□ -0.04
COL12A1-205ENST00000425443 MINPP1Q9UNW1 487 aa14.82□□□□□ -0.04
COL12A1-205ENST00000425443 COL16A1Q07092 1604 aaPredicted RBP14.82□□□□□ -0.04
COL12A1-205ENST00000425443 BAZ2BQ9UIF8 2168 aaKnown RBP14.82□□□□□ -0.04
COL12A1-205ENST00000425443 STK36Q9NRP7 1315 aa14.82□□□□□ -0.04
COL12A1-205ENST00000425443 CUTAO60888 179 aa14.82□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms