RNA–Protein interactions for RNA: ENST00000425231.2

CDCP1-202, Transcript of CUB domain containing protein 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CDCP1, Length 1,416 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDCP1-202ENST00000425231 ZNF333Q96JL9 665 aa26.07■■□□□ 1.76
CDCP1-202ENST00000425231 CRNKL1Q9BZJ0 848 aaKnown RBP26.07■■□□□ 1.76
CDCP1-202ENST00000425231 DDX60LQ5H9U9 1706 aaKnown RBP26.07■■□□□ 1.76
CDCP1-202ENST00000425231 FMNL1O95466 1100 aaPredicted RBP26.06■■□□□ 1.76
CDCP1-202ENST00000425231 OSBPP22059 807 aa26.06■■□□□ 1.76
CDCP1-202ENST00000425231 BACE1P56817 501 aa26.06■■□□□ 1.76
CDCP1-202ENST00000425231 SLC9C1Q4G0N8 1177 aa26.06■■□□□ 1.76
CDCP1-202ENST00000425231 LCORLQ8N3X6 602 aa26.06■■□□□ 1.76
CDCP1-202ENST00000425231 SMCR8Q8TEV9 937 aaPredicted RBP26.06■■□□□ 1.76
CDCP1-202ENST00000425231 SRRDQ9UH36 339 aa26.06■■□□□ 1.76
CDCP1-202ENST00000425231 POTEFA5A3E0 1075 aa26.05■■□□□ 1.76
CDCP1-202ENST00000425231 MTMR2Q13614 643 aa26.05■■□□□ 1.76
CDCP1-202ENST00000425231 NBPF11Q86T75 865 aa26.05■■□□□ 1.76
CDCP1-202ENST00000425231 YTHDC1Q96MU7 727 aaKnown RBP26.05■■□□□ 1.76
CDCP1-202ENST00000425231 ECHDC1Q9NTX5 307 aa26.05■■□□□ 1.76
CDCP1-202ENST00000425231 MGAMO43451 1857 aa26.05■■□□□ 1.76
CDCP1-202ENST00000425231 CHGBP05060 677 aa26.05■■□□□ 1.76
CDCP1-202ENST00000425231 HOXD10P28358 340 aa26.05■■□□□ 1.76
CDCP1-202ENST00000425231 SDR42E1Q8WUS8 393 aa26.05■■□□□ 1.76
CDCP1-202ENST00000425231 DDX24Q9GZR7 859 aaKnown RBP eCLIP26.05■■□□□ 1.76
CDCP1-202ENST00000425231 ARMT1Q9H993 441 aa26.05■■□□□ 1.76
CDCP1-202ENST00000425231 PNMA3Q9UL41 463 aa26.05■■□□□ 1.76
CDCP1-202ENST00000425231 GH2P01242 217 aa26.04■■□□□ 1.76
CDCP1-202ENST00000425231 DCP1AQ9NPI6 582 aaPredicted RBP26.04■■□□□ 1.76
CDCP1-202ENST00000425231 NAV1Q8NEY1 1877 aa26.03■■□□□ 1.76
CDCP1-202ENST00000425231 RBBP6Q7Z6E9 1792 aaKnown RBP26.03■■□□□ 1.76
CDCP1-202ENST00000425231 C19orf81C9J6K1 198 aa26.03■■□□□ 1.76
CDCP1-202ENST00000425231 USP17L10C9JJH3 530 aa26.03■■□□□ 1.76
CDCP1-202ENST00000425231 POLR3DP05423 398 aaPredicted RBP26.03■■□□□ 1.76
CDCP1-202ENST00000425231 FCGRTP55899 365 aa26.03■■□□□ 1.76
CDCP1-202ENST00000425231 EVX2Q03828 476 aa26.03■■□□□ 1.76
CDCP1-202ENST00000425231 GABPAQ06546 454 aa26.03■■□□□ 1.76
CDCP1-202ENST00000425231 PABPC4Q13310 644 aaKnown RBP eCLIP26.03■■□□□ 1.76
CDCP1-202ENST00000425231 UBE3CQ15386 1083 aa26.03■■□□□ 1.76
CDCP1-202ENST00000425231 SH3TC2Q8TF17 1288 aa26.03■■□□□ 1.76
CDCP1-202ENST00000425231 ASCC2Q9H1I8 757 aaPredicted RBP26.03■■□□□ 1.76
CDCP1-202ENST00000425231 MCM9Q9NXL9 1143 aa26.03■■□□□ 1.76
CDCP1-202ENST00000425231 MKI67P46013 3256 aaKnown RBP26.02■■□□□ 1.76
CDCP1-202ENST00000425231 KIAA0100Q14667 2235 aaKnown RBP26.02■■□□□ 1.76
CDCP1-202ENST00000425231 SHMT1P34896 483 aa26.02■■□□□ 1.76
CDCP1-202ENST00000425231 CERKLQ49MI3 558 aaPredicted RBP26.02■■□□□ 1.76
CDCP1-202ENST00000425231 ANKRD13CQ8N6S4 541 aa26.02■■□□□ 1.76
CDCP1-202ENST00000425231 MYH7P12883 1935 aa26.02■■□□□ 1.76
CDCP1-202ENST00000425231 PRKAB2O43741 272 aa26.01■■□□□ 1.75
CDCP1-202ENST00000425231 MBD4O95243 580 aa26.01■■□□□ 1.75
CDCP1-202ENST00000425231 MYPNQ86TC9 1320 aa26.01■■□□□ 1.75
CDCP1-202ENST00000425231 TMOD4Q9NZQ9 345 aa26.01■■□□□ 1.75
CDCP1-202ENST00000425231 HOXA7P31268 230 aaPredicted RBP26■■□□□ 1.75
CDCP1-202ENST00000425231 FAM110CQ1W6H9 321 aa26■■□□□ 1.75
CDCP1-202ENST00000425231 CRBNQ96SW2 442 aa26■■□□□ 1.75
CDCP1-202ENST00000425231 GCLCP48506 637 aaPredicted RBP25.99■■□□□ 1.75
CDCP1-202ENST00000425231 PRKCZQ05513 592 aa25.99■■□□□ 1.75
CDCP1-202ENST00000425231 ABCB5Q2M3G0 1257 aa25.99■■□□□ 1.75
CDCP1-202ENST00000425231 TSHZ3Q63HK5 1081 aa25.99■■□□□ 1.75
CDCP1-202ENST00000425231 EMILIN3Q9NT22 766 aa25.99■■□□□ 1.75
CDCP1-202ENST00000425231 GABRQQ9UN88 632 aa25.99■■□□□ 1.75
CDCP1-202ENST00000425231 ZSCAN25Q6NSZ9 544 aa25.98■■□□□ 1.75
CDCP1-202ENST00000425231 RAET1EQ8TD07 263 aa25.98■■□□□ 1.75
CDCP1-202ENST00000425231 TMEM106CQ9BVX2 250 aa25.98■■□□□ 1.75
CDCP1-202ENST00000425231 PUS7LQ9H0K6 701 aaKnown RBP25.98■■□□□ 1.75
CDCP1-202ENST00000425231 ATP8A2Q9NTI2 1148 aa25.98■■□□□ 1.75
CDCP1-202ENST00000425231 CYP2D6P10635 497 aa25.97■■□□□ 1.75
CDCP1-202ENST00000425231 EN2P19622 333 aaPredicted RBP25.97■■□□□ 1.75
CDCP1-202ENST00000425231 GPATCH3Q96I76 525 aa25.97■■□□□ 1.75
CDCP1-202ENST00000425231 GRK4P32298 578 aa25.97■■□□□ 1.75
CDCP1-202ENST00000425231 GUCY1A2P33402 732 aa25.97■■□□□ 1.75
CDCP1-202ENST00000425231 RAB3GAP1Q15042 981 aa25.97■■□□□ 1.75
CDCP1-202ENST00000425231 USP17L2Q6R6M4 530 aa25.97■■□□□ 1.75
CDCP1-202ENST00000425231 KBTBD3Q8NAB2 608 aa25.97■■□□□ 1.75
CDCP1-202ENST00000425231 P2RX7Q99572 595 aaKnown RBP25.97■■□□□ 1.75
CDCP1-202ENST00000425231 TNPO2O14787 897 aaKnown RBP25.96■■□□□ 1.75
CDCP1-202ENST00000425231 MYCP01106 439 aaPredicted RBP25.96■■□□□ 1.75
CDCP1-202ENST00000425231 CABP5Q9NP86 173 aa25.96■■□□□ 1.75
CDCP1-202ENST00000425231 PDE4DIPQ5VU43 2346 aa25.96■■□□□ 1.75
CDCP1-202ENST00000425231 DOCK3Q8IZD9 2030 aa25.95■■□□□ 1.75
CDCP1-202ENST00000425231 BAZ2AQ9UIF9 1905 aaKnown RBP25.95■■□□□ 1.74
CDCP1-202ENST00000425231 FLT3LGP49771 235 aa25.95■■□□□ 1.74
CDCP1-202ENST00000425231 IRX3P78415 501 aaPredicted RBP25.95■■□□□ 1.74
CDCP1-202ENST00000425231 C12orf42Q96LP6 360 aa25.95■■□□□ 1.74
CDCP1-202ENST00000425231 SLC44A5Q8NCS7 719 aa25.94■■□□□ 1.74
CDCP1-202ENST00000425231 ACER1Q8TDN7 264 aa25.94■■□□□ 1.74
CDCP1-202ENST00000425231 OTUD7AQ8TE49 926 aaPredicted RBP25.94■■□□□ 1.74
CDCP1-202ENST00000425231 DYNLL2Q96FJ2 89 aa25.94■■□□□ 1.74
CDCP1-202ENST00000425231 KIAA1683Q9H0B3 1180 aa25.94■■□□□ 1.74
CDCP1-202ENST00000425231 MORF4L1Q9UBU8 362 aa25.94■■□□□ 1.74
CDCP1-202ENST00000425231 TAOK2Q9UL54 1235 aa25.94■■□□□ 1.74
CDCP1-202ENST00000425231 SLC4A4Q9Y6R1 1079 aa25.94■■□□□ 1.74
CDCP1-202ENST00000425231 TTC41PQ6P2S7 1318 aa25.93■■□□□ 1.74
CDCP1-202ENST00000425231 SMIM22K7EJ46 135 aa25.93■■□□□ 1.74
CDCP1-202ENST00000425231 HERVK_113P62684 666 aa25.93■■□□□ 1.74
CDCP1-202ENST00000425231 MTFR1Q15390 333 aa25.93■■□□□ 1.74
CDCP1-202ENST00000425231 C12orf60Q5U649 245 aa25.93■■□□□ 1.74
CDCP1-202ENST00000425231 SWAP70Q9UH65 585 aa25.93■■□□□ 1.74
CDCP1-202ENST00000425231 USP17L12C9JPN9 530 aa25.92■■□□□ 1.74
CDCP1-202ENST00000425231 USP17L21D6R901 530 aa25.92■■□□□ 1.74
CDCP1-202ENST00000425231 IRF5Q13568 498 aa25.92■■□□□ 1.74
CDCP1-202ENST00000425231 SEPT2Q15019 361 aa25.92■■□□□ 1.74
CDCP1-202ENST00000425231 ZYXQ15942 572 aaKnown RBP25.92■■□□□ 1.74
CDCP1-202ENST00000425231 POTEEQ6S8J3 1075 aa25.92■■□□□ 1.74
CDCP1-202ENST00000425231 PI4K2BQ8TCG2 481 aa25.92■■□□□ 1.74
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms