RNA–Protein interactions for RNA: ENST00000425071.5

HDAC9-209, Transcript of histone deacetylase 9, humanhuman

TSL 3

Gene HDAC9, Length 471 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC9-209ENST00000425071 FOSL1P15407 271 aa6.33□□□□□ -1.4
HDAC9-209ENST00000425071 CDK5R2Q13319 367 aa6.33□□□□□ -1.4
HDAC9-209ENST00000425071 LRRFIP1Q32MZ4 808 aaKnown RBP6.33□□□□□ -1.4
HDAC9-209ENST00000425071 FBXO27Q8NI29 283 aa6.33□□□□□ -1.4
HDAC9-209ENST00000425071 FBRSQ9HAH7 460 aa6.33□□□□□ -1.4
HDAC9-209ENST00000425071 LGR6Q9HBX8 967 aa6.33□□□□□ -1.4
HDAC9-209ENST00000425071 UBP1Q9NZI7 540 aa6.33□□□□□ -1.4
HDAC9-209ENST00000425071 TJP2Q9UDY2 1190 aa6.33□□□□□ -1.4
HDAC9-209ENST00000425071 GTF2IRD1Q9UHL9 959 aa6.33□□□□□ -1.4
HDAC9-209ENST00000425071 POLR3KQ9Y2Y1 108 aaPredicted RBP6.33□□□□□ -1.4
HDAC9-209ENST00000425071 PCDHGB7Q9Y5F8 929 aa6.33□□□□□ -1.4
HDAC9-209ENST00000425071 ABCC9O60706 1549 aa6.32□□□□□ -1.4
HDAC9-209ENST00000425071 FAM170BA6NMN3 283 aa6.32□□□□□ -1.4
HDAC9-209ENST00000425071 TLR3O15455 904 aaKnown RBP6.32□□□□□ -1.4
HDAC9-209ENST00000425071 CYP26A1O43174 497 aa6.32□□□□□ -1.4
HDAC9-209ENST00000425071 IMPDH2P12268 514 aa6.32□□□□□ -1.4
HDAC9-209ENST00000425071 CRKP46108 304 aa6.32□□□□□ -1.4
HDAC9-209ENST00000425071 NKG7Q16617 165 aa6.32□□□□□ -1.4
HDAC9-209ENST00000425071 ZMYM1Q5SVZ6 1142 aa6.32□□□□□ -1.4
HDAC9-209ENST00000425071 ZNF765Q7L2R6 523 aa6.32□□□□□ -1.4
HDAC9-209ENST00000425071 SLFN12Q8IYM2 578 aa6.32□□□□□ -1.4
HDAC9-209ENST00000425071 RASGRP4Q8TDF6 673 aa6.32□□□□□ -1.4
HDAC9-209ENST00000425071 ACSF2Q96CM8 615 aaPredicted RBP6.32□□□□□ -1.4
HDAC9-209ENST00000425071 BRMS1Q9HCU9 246 aa6.32□□□□□ -1.4
HDAC9-209ENST00000425071 REV1Q9UBZ9 1251 aa6.32□□□□□ -1.4
HDAC9-209ENST00000425071 TGFB1P01137 390 aa6.31□□□□□ -1.4
HDAC9-209ENST00000425071 CYP7A1P22680 504 aa6.31□□□□□ -1.4
HDAC9-209ENST00000425071 ERCC5P28715 1186 aaPredicted RBP6.31□□□□□ -1.4
HDAC9-209ENST00000425071 GJA8P48165 433 aa6.31□□□□□ -1.4
HDAC9-209ENST00000425071 SEZ6Q53EL9 994 aa6.31□□□□□ -1.4
HDAC9-209ENST00000425071 XP32Q5T750 250 aa6.31□□□□□ -1.4
HDAC9-209ENST00000425071 PRAMEF13Q5VWM6 474 aa6.31□□□□□ -1.4
HDAC9-209ENST00000425071 TOP6BLQ8N6T0 577 aa6.31□□□□□ -1.4
HDAC9-209ENST00000425071 CCSER2Q9H7U1 834 aa6.31□□□□□ -1.4
HDAC9-209ENST00000425071 IGSF5Q9NSI5 407 aa6.31□□□□□ -1.4
HDAC9-209ENST00000425071 PCDHB14Q9Y5E9 798 aa6.31□□□□□ -1.4
HDAC9-209ENST00000425071 GRIN3BO60391 1043 aa6.3□□□□□ -1.4
HDAC9-209ENST00000425071 MCM4P33991 863 aa6.3□□□□□ -1.4
HDAC9-209ENST00000425071 RAD51AP2Q09MP3 1159 aa6.3□□□□□ -1.4
HDAC9-209ENST00000425071 LRP8Q14114 963 aa6.3□□□□□ -1.4
HDAC9-209ENST00000425071 C9orf131Q5VYM1 1079 aa6.3□□□□□ -1.4
HDAC9-209ENST00000425071 LETMD1Q6P1Q0 360 aa6.3□□□□□ -1.4
HDAC9-209ENST00000425071 UBE3DQ7Z6J8 389 aa6.3□□□□□ -1.4
HDAC9-209ENST00000425071 FAM13CQ8NE31 585 aa6.3□□□□□ -1.4
HDAC9-209ENST00000425071 GPRASP2Q96D09 838 aa6.3□□□□□ -1.4
HDAC9-209ENST00000425071 MAPK8IP1Q9UQF2 711 aa6.3□□□□□ -1.4
HDAC9-209ENST00000425071 CORINQ9Y5Q5 1042 aa6.3□□□□□ -1.4
HDAC9-209ENST00000425071 SLITRK5O94991 958 aa6.29□□□□□ -1.4
HDAC9-209ENST00000425071 CCNFP41002 786 aa6.29□□□□□ -1.4
HDAC9-209ENST00000425071 ETV3P41162 512 aa6.29□□□□□ -1.4
HDAC9-209ENST00000425071 CD97P48960 835 aa6.29□□□□□ -1.4
HDAC9-209ENST00000425071 PAK2Q13177 524 aa6.29□□□□□ -1.4
HDAC9-209ENST00000425071 GNL2Q13823 731 aaKnown RBP6.29□□□□□ -1.4
HDAC9-209ENST00000425071 C22orf34Q6ZV56 151 aa6.29□□□□□ -1.4
HDAC9-209ENST00000425071 CYB5D2Q8WUJ1 264 aa6.29□□□□□ -1.4
HDAC9-209ENST00000425071 PRDM5Q9NQX1 630 aaPredicted RBP6.29□□□□□ -1.4
HDAC9-209ENST00000425071 GMIPQ9P107 970 aa6.29□□□□□ -1.4
HDAC9-209ENST00000425071 KIAA1324LA8MWY0 1029 aaPredicted RBP6.28□□□□□ -1.4
HDAC9-209ENST00000425071 LEFTY1O75610 366 aa6.28□□□□□ -1.4
HDAC9-209ENST00000425071 EOMESO95936 686 aa6.28□□□□□ -1.4
HDAC9-209ENST00000425071 CDCP2Q5VXM1 449 aa6.28□□□□□ -1.4
HDAC9-209ENST00000425071 ARHGAP27Q6ZUM4 889 aa6.28□□□□□ -1.4
HDAC9-209ENST00000425071 FAM214BQ7L5A3 538 aa6.28□□□□□ -1.4
HDAC9-209ENST00000425071 VPS37DQ86XT2 251 aa6.28□□□□□ -1.4
HDAC9-209ENST00000425071 SHISA5Q8N114 240 aa6.28□□□□□ -1.4
HDAC9-209ENST00000425071 SEC16BQ96JE7 1060 aa6.28□□□□□ -1.4
HDAC9-209ENST00000425071 CCDC74BQ96LY2 380 aa6.28□□□□□ -1.4
HDAC9-209ENST00000425071 MIPEPQ99797 713 aa6.28□□□□□ -1.4
HDAC9-209ENST00000425071 ZNRF3Q9ULT6 936 aa6.28□□□□□ -1.4
HDAC9-209ENST00000425071 CEP131Q9UPN4 1083 aa6.28□□□□□ -1.4
HDAC9-209ENST00000425071 INPP5FQ9Y2H2 1132 aa6.28□□□□□ -1.4
HDAC9-209ENST00000425071 SLC22A31A6NKX4 558 aa6.27□□□□□ -1.41
HDAC9-209ENST00000425071 MEIS3P2A8K0S8 358 aa6.27□□□□□ -1.41
HDAC9-209ENST00000425071 KIR3DL1P43629 444 aa6.27□□□□□ -1.41
HDAC9-209ENST00000425071 SOX9P48436 509 aa6.27□□□□□ -1.41
HDAC9-209ENST00000425071 CLCQ05315 142 aa6.27□□□□□ -1.41
HDAC9-209ENST00000425071 SFRP5Q5T4F7 317 aa6.27□□□□□ -1.41
HDAC9-209ENST00000425071 INTS3Q68E01 1043 aaKnown RBP6.27□□□□□ -1.41
HDAC9-209ENST00000425071 GK5Q6ZS86 529 aa6.27□□□□□ -1.41
HDAC9-209ENST00000425071 DTX1Q86Y01 620 aa6.27□□□□□ -1.41
HDAC9-209ENST00000425071 RBBP8NLQ8NC74 664 aaPredicted RBP6.27□□□□□ -1.41
HDAC9-209ENST00000425071 NETO1Q8TDF5 533 aa6.27□□□□□ -1.41
HDAC9-209ENST00000425071 MISP3Q96FF7 219 aa6.27□□□□□ -1.41
HDAC9-209ENST00000425071 BSDC1Q9NW68 430 aaPredicted RBP6.27□□□□□ -1.41
HDAC9-209ENST00000425071 STRIP2Q9ULQ0 834 aa6.27□□□□□ -1.41
HDAC9-209ENST00000425071 TPX2Q9ULW0 747 aaKnown RBP6.27□□□□□ -1.41
HDAC9-209ENST00000425071 SNX11Q9Y5W9 270 aa6.27□□□□□ -1.41
HDAC9-209ENST00000425071 GNAT3A8MTJ3 354 aa6.26□□□□□ -1.41
HDAC9-209ENST00000425071 RGS13O14921 159 aa6.26□□□□□ -1.41
HDAC9-209ENST00000425071 PRNPP04156 253 aa6.26□□□□□ -1.41
HDAC9-209ENST00000425071 OXCT1P55809 520 aa6.26□□□□□ -1.41
HDAC9-209ENST00000425071 IFI16Q16666 785 aaKnown RBP6.26□□□□□ -1.41
HDAC9-209ENST00000425071 MSMPQ1L6U9 139 aa6.26□□□□□ -1.41
HDAC9-209ENST00000425071 ARTNQ5T4W7 220 aa6.26□□□□□ -1.41
HDAC9-209ENST00000425071 STK11IPQ8N1F8 1099 aa6.26□□□□□ -1.41
HDAC9-209ENST00000425071 Q8N3U1 123 aa6.26□□□□□ -1.41
HDAC9-209ENST00000425071 TMEM40Q8WWA1 233 aa6.26□□□□□ -1.41
HDAC9-209ENST00000425071 HEXIM2Q96MH2 286 aaKnown RBP6.26□□□□□ -1.41
HDAC9-209ENST00000425071 FERD3LQ96RJ6 166 aa6.26□□□□□ -1.41
HDAC9-209ENST00000425071 ACBD3Q9H3P7 528 aa6.26□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms