RNA–Protein interactions for RNA: ENST00000425060.1

IGHV3-47-201, Transcript of immunoglobulin heavy variable 3-47 (pseudogene), humanhuman

BASIC

Gene IGHV3-47, Length 335 nt, Biotype IG V pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IGHV3-47-201ENST00000425060 OSBP2Q969R2 916 aa21.58■■□□□ 1.05
IGHV3-47-201ENST00000425060 ZBTB47Q9UFB7 747 aaPredicted RBP21.58■■□□□ 1.05
IGHV3-47-201ENST00000425060 ZFYP08048 801 aaPredicted RBP21.57■■□□□ 1.04
IGHV3-47-201ENST00000425060 SHMT1P34896 483 aa21.57■■□□□ 1.04
IGHV3-47-201ENST00000425060 PDE1AP54750 535 aa21.57■■□□□ 1.04
IGHV3-47-201ENST00000425060 SH3D19Q5HYK7 790 aa21.57■■□□□ 1.04
IGHV3-47-201ENST00000425060 C17orf99Q6UX52 265 aa21.57■■□□□ 1.04
IGHV3-47-201ENST00000425060 CD99L2Q8TCZ2 262 aa21.57■■□□□ 1.04
IGHV3-47-201ENST00000425060 APPBP2Q92624 585 aa21.57■■□□□ 1.04
IGHV3-47-201ENST00000425060 ERO1AQ96HE7 468 aa21.57■■□□□ 1.04
IGHV3-47-201ENST00000425060 STRBPQ96SI9 672 aaKnown RBP21.57■■□□□ 1.04
IGHV3-47-201ENST00000425060 ZBTB21Q9ULJ3 1066 aa21.57■■□□□ 1.04
IGHV3-47-201ENST00000425060 SLC45A1Q9Y2W3 748 aa21.57■■□□□ 1.04
IGHV3-47-201ENST00000425060 CYP2D6P10635 497 aa21.56■■□□□ 1.04
IGHV3-47-201ENST00000425060 GADL1Q6ZQY3 521 aa21.56■■□□□ 1.04
IGHV3-47-201ENST00000425060 AS3MTQ9HBK9 375 aa21.56■■□□□ 1.04
IGHV3-47-201ENST00000425060 NUCB1Q02818 461 aa21.55■■□□□ 1.04
IGHV3-47-201ENST00000425060 OTOP1Q7RTM1 612 aa21.55■■□□□ 1.04
IGHV3-47-201ENST00000425060 PROCA1Q8NCQ7 364 aaPredicted RBP21.55■■□□□ 1.04
IGHV3-47-201ENST00000425060 LNPKQ9C0E8 428 aa21.55■■□□□ 1.04
IGHV3-47-201ENST00000425060 TAOK2Q9UL54 1235 aa21.55■■□□□ 1.04
IGHV3-47-201ENST00000425060 SLC4A4Q9Y6R1 1079 aa21.55■■□□□ 1.04
IGHV3-47-201ENST00000425060 GH2P01242 217 aa21.54■■□□□ 1.04
IGHV3-47-201ENST00000425060 CYP2C8P10632 490 aa21.54■■□□□ 1.04
IGHV3-47-201ENST00000425060 BACE1P56817 501 aa21.54■■□□□ 1.04
IGHV3-47-201ENST00000425060 CERKLQ49MI3 558 aaPredicted RBP21.54■■□□□ 1.04
IGHV3-47-201ENST00000425060 TREML2Q5T2D2 321 aa21.54■■□□□ 1.04
IGHV3-47-201ENST00000425060 C12orf60Q5U649 245 aa21.54■■□□□ 1.04
IGHV3-47-201ENST00000425060 B4GALNT3Q6L9W6 998 aa21.54■■□□□ 1.04
IGHV3-47-201ENST00000425060 FBXO46Q6PJ61 603 aaPredicted RBP21.54■■□□□ 1.04
IGHV3-47-201ENST00000425060 PARK7Q99497 189 aaKnown RBP21.54■■□□□ 1.04
IGHV3-47-201ENST00000425060 AGTPBP1Q9UPW5 1226 aa21.54■■□□□ 1.04
IGHV3-47-201ENST00000425060 TRIM17Q9Y577 477 aa21.54■■□□□ 1.04
IGHV3-47-201ENST00000425060 USP17L12C9JPN9 530 aa21.53■■□□□ 1.04
IGHV3-47-201ENST00000425060 USP17L21D6R901 530 aa21.53■■□□□ 1.04
IGHV3-47-201ENST00000425060 SMIM22K7EJ46 135 aa21.53■■□□□ 1.04
IGHV3-47-201ENST00000425060 BCRP11274 1271 aa21.53■■□□□ 1.04
IGHV3-47-201ENST00000425060 HMGCS2P54868 508 aa21.53■■□□□ 1.04
IGHV3-47-201ENST00000425060 IRX6P78412 446 aaPredicted RBP21.53■■□□□ 1.04
IGHV3-47-201ENST00000425060 CHD1LQ86WJ1 897 aa21.53■■□□□ 1.04
IGHV3-47-201ENST00000425060 CPA4Q9UI42 421 aa21.53■■□□□ 1.04
IGHV3-47-201ENST00000425060 BAZ2AQ9UIF9 1905 aaKnown RBP21.53■■□□□ 1.04
IGHV3-47-201ENST00000425060 LOC285556D6RIA3 1793 aa21.52■■□□□ 1.04
IGHV3-47-201ENST00000425060 CYP2D7A0A087X1C5 515 aa21.52■■□□□ 1.04
IGHV3-47-201ENST00000425060 GSG1L2A8MUP6 293 aa21.52■■□□□ 1.04
IGHV3-47-201ENST00000425060 M0R2C6 588 aa21.52■■□□□ 1.04
IGHV3-47-201ENST00000425060 GUCY1A2P33402 732 aa21.52■■□□□ 1.04
IGHV3-47-201ENST00000425060 LRRFIP1Q32MZ4 808 aaKnown RBP21.52■■□□□ 1.04
IGHV3-47-201ENST00000425060 ZMYM1Q5SVZ6 1142 aa21.52■■□□□ 1.04
IGHV3-47-201ENST00000425060 CTR9Q6PD62 1173 aa21.52■■□□□ 1.04
IGHV3-47-201ENST00000425060 DYNLL2Q96FJ2 89 aa21.52■■□□□ 1.04
IGHV3-47-201ENST00000425060 EFCC1Q9HA90 598 aa21.52■■□□□ 1.04
IGHV3-47-201ENST00000425060 HPS5Q9UPZ3 1129 aa21.52■■□□□ 1.04
IGHV3-47-201ENST00000425060 C19orf81C9J6K1 198 aa21.51■■□□□ 1.03
IGHV3-47-201ENST00000425060 GPAA1O43292 621 aa21.51■■□□□ 1.03
IGHV3-47-201ENST00000425060 LACTBP83111 547 aaPredicted RBP21.51■■□□□ 1.03
IGHV3-47-201ENST00000425060 MTMR2Q13614 643 aa21.51■■□□□ 1.03
IGHV3-47-201ENST00000425060 ABCB5Q2M3G0 1257 aa21.51■■□□□ 1.03
IGHV3-47-201ENST00000425060 GIMAP6Q6P9H5 292 aa21.51■■□□□ 1.03
IGHV3-47-201ENST00000425060 SLC44A5Q8NCS7 719 aa21.51■■□□□ 1.03
IGHV3-47-201ENST00000425060 EVI5LQ96CN4 794 aa21.51■■□□□ 1.03
IGHV3-47-201ENST00000425060 SEC62Q99442 399 aaKnown RBP21.51■■□□□ 1.03
IGHV3-47-201ENST00000425060 FSD1Q9BTV5 496 aa21.51■■□□□ 1.03
IGHV3-47-201ENST00000425060 SWAP70Q9UH65 585 aa21.51■■□□□ 1.03
IGHV3-47-201ENST00000425060 CCDC85CA6NKD9 419 aa21.5■■□□□ 1.03
IGHV3-47-201ENST00000425060 USP17L10C9JJH3 530 aa21.5■■□□□ 1.03
IGHV3-47-201ENST00000425060 PLEKHM2Q8IWE5 1019 aa21.5■■□□□ 1.03
IGHV3-47-201ENST00000425060 ARHGAP39Q9C0H5 1083 aa21.5■■□□□ 1.03
IGHV3-47-201ENST00000425060 OSBPL3Q9H4L5 887 aa21.5■■□□□ 1.03
IGHV3-47-201ENST00000425060 PTPN22Q9Y2R2 807 aa21.5■■□□□ 1.03
IGHV3-47-201ENST00000425060 CTGFP29279 349 aa21.49■■□□□ 1.03
IGHV3-47-201ENST00000425060 SBK1Q52WX2 424 aa21.49■■□□□ 1.03
IGHV3-47-201ENST00000425060 DDRGK1Q96HY6 314 aa21.49■■□□□ 1.03
IGHV3-47-201ENST00000425060 CABP5Q9NP86 173 aa21.49■■□□□ 1.03
IGHV3-47-201ENST00000425060 EMILIN3Q9NT22 766 aa21.49■■□□□ 1.03
IGHV3-47-201ENST00000425060 GNAT2P19087 354 aa21.48■■□□□ 1.03
IGHV3-47-201ENST00000425060 HOXA7P31268 230 aaPredicted RBP21.48■■□□□ 1.03
IGHV3-47-201ENST00000425060 CDK8P49336 464 aa21.48■■□□□ 1.03
IGHV3-47-201ENST00000425060 RAB3GAP1Q15042 981 aa21.48■■□□□ 1.03
IGHV3-47-201ENST00000425060 C16orf86Q6ZW13 317 aa21.48■■□□□ 1.03
IGHV3-47-201ENST00000425060 EPB41L4AQ9HCS5 686 aaPredicted RBP21.48■■□□□ 1.03
IGHV3-47-201ENST00000425060 PATL2C9JE40 543 aaKnown RBP21.47■■□□□ 1.03
IGHV3-47-201ENST00000425060 SEPT2Q15019 361 aa21.47■■□□□ 1.03
IGHV3-47-201ENST00000425060 ARHGEF6Q15052 776 aa21.47■■□□□ 1.03
IGHV3-47-201ENST00000425060 TICAM2Q86XR7 235 aa21.47■■□□□ 1.03
IGHV3-47-201ENST00000425060 ACER1Q8TDN7 264 aa21.47■■□□□ 1.03
IGHV3-47-201ENST00000425060 C12orf42Q96LP6 360 aa21.47■■□□□ 1.03
IGHV3-47-201ENST00000425060 ARPP21Q9UBL0 812 aaPredicted RBP21.47■■□□□ 1.03
IGHV3-47-201ENST00000425060 ZSWIM8A7E2V4 1837 aa21.47■■□□□ 1.03
IGHV3-47-201ENST00000425060 PABPC4Q13310 644 aaKnown RBP eCLIP21.46■■□□□ 1.03
IGHV3-47-201ENST00000425060 KIF22Q14807 665 aa21.46■■□□□ 1.03
IGHV3-47-201ENST00000425060 USP17L2Q6R6M4 530 aa21.46■■□□□ 1.03
IGHV3-47-201ENST00000425060 AMOTL1Q8IY63 956 aa21.46■■□□□ 1.03
IGHV3-47-201ENST00000425060 KIAA1683Q9H0B3 1180 aa21.46■■□□□ 1.03
IGHV3-47-201ENST00000425060 ASCC2Q9H1I8 757 aaPredicted RBP21.46■■□□□ 1.03
IGHV3-47-201ENST00000425060 TMOD4Q9NZQ9 345 aa21.46■■□□□ 1.03
IGHV3-47-201ENST00000425060 PNMA3Q9UL41 463 aa21.46■■□□□ 1.03
IGHV3-47-201ENST00000425060 GNRH1P01148 92 aa21.45■■□□□ 1.02
IGHV3-47-201ENST00000425060 AKR1B1P15121 316 aa21.45■■□□□ 1.02
IGHV3-47-201ENST00000425060 SIAH1Q8IUQ4 282 aa21.45■■□□□ 1.02
Retrieved 100 of 20,778 RNA–protein pairs in 44.2 ms