RNA–Protein interactions for RNA: ENST00000424011.6

CMTM3-202, Transcript of CKLF like MARVEL transmembrane domain containing 3, humanhuman

APPRIS P1 TSL 2 BASIC

Gene CMTM3, Length 2,330 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM3-202ENST00000424011 PLCG2P16885 1265 aa19.16■□□□□ 0.66
CMTM3-202ENST00000424011 TNMDQ9H2S6 317 aa19.16■□□□□ 0.66
CMTM3-202ENST00000424011 LRRC37AA6NMS7 1700 aa19.15■□□□□ 0.66
CMTM3-202ENST00000424011 CKAP2LQ8IYA6 745 aa19.15■□□□□ 0.66
CMTM3-202ENST00000424011 ENAHQ8N8S7 591 aaPredicted RBP19.15■□□□□ 0.66
CMTM3-202ENST00000424011 SLC26A6Q9BXS9 759 aa19.15■□□□□ 0.66
CMTM3-202ENST00000424011 CLSTN2Q9H4D0 955 aa19.15■□□□□ 0.66
CMTM3-202ENST00000424011 FAM205AQ6ZU69 1335 aa19.14■□□□□ 0.66
CMTM3-202ENST00000424011 KIF23Q02241 960 aaPredicted RBP19.14■□□□□ 0.66
CMTM3-202ENST00000424011 C2CD5Q86YS7 1000 aa19.14■□□□□ 0.66
CMTM3-202ENST00000424011 GJB4Q9NTQ9 266 aa19.14■□□□□ 0.66
CMTM3-202ENST00000424011 MKRN1Q9UHC7 482 aaKnown RBP19.14■□□□□ 0.66
CMTM3-202ENST00000424011 H0YIN7 160 aa19.14■□□□□ 0.65
CMTM3-202ENST00000424011 GNL2Q13823 731 aaKnown RBP19.14■□□□□ 0.65
CMTM3-202ENST00000424011 MFSD14BQ5SR56 506 aa19.14■□□□□ 0.65
CMTM3-202ENST00000424011 KRT40Q6A162 431 aa19.14■□□□□ 0.65
CMTM3-202ENST00000424011 MPNDQ8N594 471 aa19.14■□□□□ 0.65
CMTM3-202ENST00000424011 NUP133Q8WUM0 1156 aa19.14■□□□□ 0.65
CMTM3-202ENST00000424011 FAM163AQ96GL9 167 aaPredicted RBP19.14■□□□□ 0.65
CMTM3-202ENST00000424011 POLR3EQ9NVU0 708 aa19.14■□□□□ 0.65
CMTM3-202ENST00000424011 RBM28Q9NW13 759 aaKnown RBP19.14■□□□□ 0.65
CMTM3-202ENST00000424011 SUGT1Q9Y2Z0 365 aa19.14■□□□□ 0.65
CMTM3-202ENST00000424011 PRDM1O75626 825 aa19.13■□□□□ 0.65
CMTM3-202ENST00000424011 YEATS4O95619 227 aa19.13■□□□□ 0.65
CMTM3-202ENST00000424011 DIXDC1Q155Q3 683 aa19.13■□□□□ 0.65
CMTM3-202ENST00000424011 C12orf60Q5U649 245 aa19.13■□□□□ 0.65
CMTM3-202ENST00000424011 MYSM1Q5VVJ2 828 aa19.13■□□□□ 0.65
CMTM3-202ENST00000424011 KCNG4Q8TDN1 519 aa19.13■□□□□ 0.65
CMTM3-202ENST00000424011 SH3RF3Q8TEJ3 882 aaPredicted RBP19.13■□□□□ 0.65
CMTM3-202ENST00000424011 ZC3H12CQ9C0D7 883 aaKnown RBP19.13■□□□□ 0.65
CMTM3-202ENST00000424011 DDAH1O94760 285 aa19.13■□□□□ 0.65
CMTM3-202ENST00000424011 DEXIO95424 95 aa19.13■□□□□ 0.65
CMTM3-202ENST00000424011 STYK1Q6J9G0 422 aa19.13■□□□□ 0.65
CMTM3-202ENST00000424011 RBM43Q6ZSC3 357 aaKnown RBP19.13■□□□□ 0.65
CMTM3-202ENST00000424011 CRACR2BQ8N4Y2 399 aaPredicted RBP19.13■□□□□ 0.65
CMTM3-202ENST00000424011 ZNF622Q969S3 477 aaKnown RBP eCLIP19.13■□□□□ 0.65
CMTM3-202ENST00000424011 RTFDC1Q9BY42 306 aaPredicted RBP19.13■□□□□ 0.65
CMTM3-202ENST00000424011 CCDC39Q9UFE4 941 aa19.13■□□□□ 0.65
CMTM3-202ENST00000424011 MRVI1Q9Y6F6 885 aa19.13■□□□□ 0.65
CMTM3-202ENST00000424011 GPR75-ASB3A0A0A6YYF3 556 aa19.12■□□□□ 0.65
CMTM3-202ENST00000424011 POLR3DP05423 398 aaPredicted RBP19.12■□□□□ 0.65
CMTM3-202ENST00000424011 TYRO3Q06418 890 aa19.12■□□□□ 0.65
CMTM3-202ENST00000424011 ZNF287Q9HBT7 754 aa19.12■□□□□ 0.65
CMTM3-202ENST00000424011 SMIM22K7EJ46 135 aa19.12■□□□□ 0.65
CMTM3-202ENST00000424011 ADCY5O95622 1261 aa19.12■□□□□ 0.65
CMTM3-202ENST00000424011 ME1P48163 572 aa19.12■□□□□ 0.65
CMTM3-202ENST00000424011 SAFBQ15424 915 aaKnown RBP eCLIP19.12■□□□□ 0.65
CMTM3-202ENST00000424011 GRIK5Q16478 980 aa19.12■□□□□ 0.65
CMTM3-202ENST00000424011 CCDC178Q5BJE1 867 aa19.12■□□□□ 0.65
CMTM3-202ENST00000424011 DPP8Q6V1X1 898 aaPredicted RBP19.12■□□□□ 0.65
CMTM3-202ENST00000424011 LTBP1Q14766 1721 aa19.12■□□□□ 0.65
CMTM3-202ENST00000424011 TSPY2A6NKD2 308 aa19.11■□□□□ 0.65
CMTM3-202ENST00000424011 USP17L8P0C7I0 530 aa19.11■□□□□ 0.65
CMTM3-202ENST00000424011 BTDP43251 543 aa19.11■□□□□ 0.65
CMTM3-202ENST00000424011 AKAP17AQ02040 695 aaKnown RBP19.11■□□□□ 0.65
CMTM3-202ENST00000424011 CCAR1Q8IX12 1150 aaKnown RBP19.11■□□□□ 0.65
CMTM3-202ENST00000424011 MYRIPQ8NFW9 859 aa19.11■□□□□ 0.65
CMTM3-202ENST00000424011 RNF26Q9BY78 433 aaPredicted RBP19.11■□□□□ 0.65
CMTM3-202ENST00000424011 GOLPH3LQ9H4A5 285 aa19.11■□□□□ 0.65
CMTM3-202ENST00000424011 ROBO3Q96MS0 1386 aa19.11■□□□□ 0.65
CMTM3-202ENST00000424011 LAMB1P07942 1786 aa19.11■□□□□ 0.65
CMTM3-202ENST00000424011 COL11A2P13942 1736 aaPredicted RBP19.11■□□□□ 0.65
CMTM3-202ENST00000424011 STK38Q15208 465 aa19.11■□□□□ 0.65
CMTM3-202ENST00000424011 SF3A1Q15459 793 aaKnown RBP19.11■□□□□ 0.65
CMTM3-202ENST00000424011 CCDC73Q6ZRK6 1079 aa19.11■□□□□ 0.65
CMTM3-202ENST00000424011 NBPF11Q86T75 865 aa19.11■□□□□ 0.65
CMTM3-202ENST00000424011 LINC00301Q8NCQ3 95 aa19.11■□□□□ 0.65
CMTM3-202ENST00000424011 AIFM3Q96NN9 605 aa19.11■□□□□ 0.65
CMTM3-202ENST00000424011 EYA3Q99504 573 aa19.11■□□□□ 0.65
CMTM3-202ENST00000424011 BAZ2AQ9UIF9 1905 aaKnown RBP19.1■□□□□ 0.65
CMTM3-202ENST00000424011 AP5Z1O43299 807 aa19.1■□□□□ 0.65
CMTM3-202ENST00000424011 CYP2D6P10635 497 aa19.1■□□□□ 0.65
CMTM3-202ENST00000424011 U2AF2P26368 475 aaKnown RBP eCLIP19.1■□□□□ 0.65
CMTM3-202ENST00000424011 TGFBRAP1Q8WUH2 860 aa19.1■□□□□ 0.65
CMTM3-202ENST00000424011 KIF28PB7ZC32 967 aa19.09■□□□□ 0.65
CMTM3-202ENST00000424011 XBP1P17861 261 aa19.09■□□□□ 0.65
CMTM3-202ENST00000424011 CHRNA5P30532 468 aa19.09■□□□□ 0.65
CMTM3-202ENST00000424011 GAKO14976 1311 aa19.09■□□□□ 0.65
CMTM3-202ENST00000424011 PTMAP06454 111 aaKnown RBP19.09■□□□□ 0.65
CMTM3-202ENST00000424011 GTF2IP78347 998 aa19.09■□□□□ 0.65
CMTM3-202ENST00000424011 ADALQ6DHV7 355 aa19.09■□□□□ 0.65
CMTM3-202ENST00000424011 OLFM4Q6UX06 510 aa19.09■□□□□ 0.65
CMTM3-202ENST00000424011 FAM200AQ8TCP9 573 aa19.09■□□□□ 0.65
CMTM3-202ENST00000424011 A0A1W2PQ27 194 aa19.08■□□□□ 0.65
CMTM3-202ENST00000424011 A0A1W2PQ64 194 aa19.08■□□□□ 0.65
CMTM3-202ENST00000424011 A0A1W2PQD8 194 aa19.08■□□□□ 0.65
CMTM3-202ENST00000424011 RIMBP2O15034 1052 aa19.08■□□□□ 0.65
CMTM3-202ENST00000424011 CTAGE5O15320 804 aa19.08■□□□□ 0.65
CMTM3-202ENST00000424011 TROAPQ12815 778 aa19.08■□□□□ 0.65
CMTM3-202ENST00000424011 ANO1Q5XXA6 986 aa19.08■□□□□ 0.65
CMTM3-202ENST00000424011 CNKSR1Q969H4 720 aa19.08■□□□□ 0.65
CMTM3-202ENST00000424011 MKNK2Q9HBH9 465 aa19.08■□□□□ 0.65
CMTM3-202ENST00000424011 G3V3G9 751 aa19.08■□□□□ 0.64
CMTM3-202ENST00000424011 SPTLC2O15270 562 aa19.08■□□□□ 0.64
CMTM3-202ENST00000424011 MMP1P03956 469 aa19.08■□□□□ 0.64
CMTM3-202ENST00000424011 DCAF8Q5TAQ9 597 aa19.08■□□□□ 0.64
CMTM3-202ENST00000424011 DGKHQ86XP1 1220 aa19.08■□□□□ 0.64
CMTM3-202ENST00000424011 TEX11Q8IYF3 940 aa19.08■□□□□ 0.64
CMTM3-202ENST00000424011 CTCFLQ8NI51 663 aaPredicted RBP19.08■□□□□ 0.64
CMTM3-202ENST00000424011 CLIC4Q9Y696 253 aa19.08■□□□□ 0.64
Retrieved 100 of 20,778 RNA–protein pairs in 52.7 ms