RNA–Protein interactions for RNA: ENST00000423941.5

HDAC6-205, Transcript of histone deacetylase 6, humanhuman

TSL 4

Gene HDAC6, Length 583 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-205ENST00000423941 HSPD1P10809 573 aaKnown RBP22.08■■□□□ 1.13
HDAC6-205ENST00000423941 GTF2A2P52657 109 aa22.08■■□□□ 1.13
HDAC6-205ENST00000423941 CWC27Q6UX04 472 aaKnown RBP22.08■■□□□ 1.13
HDAC6-205ENST00000423941 DYNLL2Q96FJ2 89 aa22.08■■□□□ 1.13
HDAC6-205ENST00000423941 NACAP1Q9BZK3 213 aa22.08■■□□□ 1.13
HDAC6-205ENST00000423941 PICK1Q9NRD5 415 aa22.08■■□□□ 1.13
HDAC6-205ENST00000423941 MFAP1P55081 439 aaKnown RBP22.07■■□□□ 1.12
HDAC6-205ENST00000423941 SREBF2Q12772 1141 aa22.07■■□□□ 1.12
HDAC6-205ENST00000423941 AMOTL1Q8IY63 956 aa22.07■■□□□ 1.12
HDAC6-205ENST00000423941 PTPN18Q99952 460 aa22.07■■□□□ 1.12
HDAC6-205ENST00000423941 TRIM34Q9BYJ4 488 aa22.07■■□□□ 1.12
HDAC6-205ENST00000423941 TBC1D2Q9BYX2 928 aa22.07■■□□□ 1.12
HDAC6-205ENST00000423941 IL25Q9H293 177 aa22.07■■□□□ 1.12
HDAC6-205ENST00000423941 ZHX2Q9Y6X8 837 aa22.07■■□□□ 1.12
HDAC6-205ENST00000423941 ZMYM6O95789 1325 aa22.06■■□□□ 1.12
HDAC6-205ENST00000423941 APPP05067 770 aa22.06■■□□□ 1.12
HDAC6-205ENST00000423941 CDK8P49336 464 aa22.06■■□□□ 1.12
HDAC6-205ENST00000423941 MOGSQ13724 837 aa22.06■■□□□ 1.12
HDAC6-205ENST00000423941 SHROOM1Q2M3G4 852 aaPredicted RBP22.06■■□□□ 1.12
HDAC6-205ENST00000423941 CERKLQ49MI3 558 aaPredicted RBP22.06■■□□□ 1.12
HDAC6-205ENST00000423941 SLC44A5Q8NCS7 719 aa22.06■■□□□ 1.12
HDAC6-205ENST00000423941 WDR18Q9BV38 432 aa22.06■■□□□ 1.12
HDAC6-205ENST00000423941 ZBTB4Q9P1Z0 1013 aaPredicted RBP22.06■■□□□ 1.12
HDAC6-205ENST00000423941 FRMD4AQ9P2Q2 1039 aaPredicted RBP22.06■■□□□ 1.12
HDAC6-205ENST00000423941 USP17L5A8MUK1 530 aa22.05■■□□□ 1.12
HDAC6-205ENST00000423941 CA12O43570 354 aa22.05■■□□□ 1.12
HDAC6-205ENST00000423941 FGAP02671 866 aa22.05■■□□□ 1.12
HDAC6-205ENST00000423941 HSPA1AP0DMV8 641 aaKnown RBP22.05■■□□□ 1.12
HDAC6-205ENST00000423941 HSPA1BP0DMV9 641 aaKnown RBP22.05■■□□□ 1.12
HDAC6-205ENST00000423941 GUCY1A2P33402 732 aa22.05■■□□□ 1.12
HDAC6-205ENST00000423941 TDO2P48775 406 aa22.05■■□□□ 1.12
HDAC6-205ENST00000423941 SNAPC2Q13487 334 aa22.05■■□□□ 1.12
HDAC6-205ENST00000423941 IFNL1Q8IU54 200 aa22.05■■□□□ 1.12
HDAC6-205ENST00000423941 BRI3BPQ8WY22 251 aa22.05■■□□□ 1.12
HDAC6-205ENST00000423941 CFHR5Q9BXR6 569 aa22.05■■□□□ 1.12
HDAC6-205ENST00000423941 NAPBQ9H115 298 aa22.05■■□□□ 1.12
HDAC6-205ENST00000423941 ANAPC4Q9UJX5 808 aa22.05■■□□□ 1.12
HDAC6-205ENST00000423941 ZBTB21Q9ULJ3 1066 aa22.05■■□□□ 1.12
HDAC6-205ENST00000423941 RAD50Q92878 1312 aa22.05■■□□□ 1.12
HDAC6-205ENST00000423941 IGF2BP3O00425 579 aaKnown RBP eCLIP22.04■■□□□ 1.12
HDAC6-205ENST00000423941 CETPP11597 493 aa22.04■■□□□ 1.12
HDAC6-205ENST00000423941 CCDC17Q96LX7 622 aa22.04■■□□□ 1.12
HDAC6-205ENST00000423941 RNF186Q9NXI6 227 aa22.04■■□□□ 1.12
HDAC6-205ENST00000423941 SAGE1Q9NXZ1 904 aa22.04■■□□□ 1.12
HDAC6-205ENST00000423941 GREB1LQ9C091 1923 aaPredicted RBP22.04■■□□□ 1.12
HDAC6-205ENST00000423941 A0A0G2JLL6 359 aaPredicted RBP22.03■■□□□ 1.12
HDAC6-205ENST00000423941 MINDY4BA8MYZ0 360 aa22.03■■□□□ 1.12
HDAC6-205ENST00000423941 GDF11O95390 407 aa22.03■■□□□ 1.12
HDAC6-205ENST00000423941 GH2P01242 217 aa22.03■■□□□ 1.12
HDAC6-205ENST00000423941 ABCB5Q2M3G0 1257 aa22.03■■□□□ 1.12
HDAC6-205ENST00000423941 PRRT2Q7Z6L0 340 aaPredicted RBP22.03■■□□□ 1.12
HDAC6-205ENST00000423941 CCDC84Q86UT8 332 aaPredicted RBP22.03■■□□□ 1.12
HDAC6-205ENST00000423941 FOXN1O15353 648 aa22.02■■□□□ 1.12
HDAC6-205ENST00000423941 FGRP09769 529 aa22.02■■□□□ 1.12
HDAC6-205ENST00000423941 PPARAQ07869 468 aa22.02■■□□□ 1.12
HDAC6-205ENST00000423941 SH3D19Q5HYK7 790 aa22.02■■□□□ 1.12
HDAC6-205ENST00000423941 ZNF280CQ8ND82 737 aa22.02■■□□□ 1.12
HDAC6-205ENST00000423941 RUFY2Q8WXA3 655 aa22.02■■□□□ 1.12
HDAC6-205ENST00000423941 DSCC1Q9BVC3 393 aa22.02■■□□□ 1.12
HDAC6-205ENST00000423941 ZCCHC17Q9NP64 241 aaKnown RBP22.02■■□□□ 1.12
HDAC6-205ENST00000423941 CCL15-CCL14A0A0B4J2E2 113 aa22.01■■□□□ 1.11
HDAC6-205ENST00000423941 SGSM2O43147 1006 aa22.01■■□□□ 1.11
HDAC6-205ENST00000423941 RASA1P20936 1047 aa22.01■■□□□ 1.11
HDAC6-205ENST00000423941 SPP2Q13103 211 aa22.01■■□□□ 1.11
HDAC6-205ENST00000423941 CCL15Q16663 113 aa22.01■■□□□ 1.11
HDAC6-205ENST00000423941 LOC285556D6RIA3 1793 aa22■■□□□ 1.11
HDAC6-205ENST00000423941 ALDH1A1P00352 501 aa22■■□□□ 1.11
HDAC6-205ENST00000423941 GPAT2Q6NUI2 795 aa22■■□□□ 1.11
HDAC6-205ENST00000423941 BEGAINQ9BUH8 593 aa22■■□□□ 1.11
HDAC6-205ENST00000423941 AS3MTQ9HBK9 375 aa22■■□□□ 1.11
HDAC6-205ENST00000423941 CABP5Q9NP86 173 aa22■■□□□ 1.11
HDAC6-205ENST00000423941 DDX52Q9Y2R4 599 aaKnown RBP eCLIP22■■□□□ 1.11
HDAC6-205ENST00000423941 TACC3Q9Y6A5 838 aa22■■□□□ 1.11
HDAC6-205ENST00000423941 LAMA4Q16363 1823 aa21.99■■□□□ 1.11
HDAC6-205ENST00000423941 BTBD19C9JJ37 291 aa21.99■■□□□ 1.11
HDAC6-205ENST00000423941 TMEM179Q6ZVK1 233 aa21.99■■□□□ 1.11
HDAC6-205ENST00000423941 ANKRD23Q86SG2 305 aa21.99■■□□□ 1.11
HDAC6-205ENST00000423941 SIAH1Q8IUQ4 282 aa21.99■■□□□ 1.11
HDAC6-205ENST00000423941 FAM43AQ8N2R8 423 aa21.99■■□□□ 1.11
HDAC6-205ENST00000423941 GNL3Q9BVP2 549 aaKnown RBP eCLIP21.99■■□□□ 1.11
HDAC6-205ENST00000423941 TRIM75PA6NK02 468 aa21.98■■□□□ 1.11
HDAC6-205ENST00000423941 TRPA1O75762 1119 aa21.98■■□□□ 1.11
HDAC6-205ENST00000423941 HSPA8P11142 646 aaKnown RBP21.98■■□□□ 1.11
HDAC6-205ENST00000423941 AKR1B1P15121 316 aa21.98■■□□□ 1.11
HDAC6-205ENST00000423941 BACE1P56817 501 aa21.98■■□□□ 1.11
HDAC6-205ENST00000423941 SEPT2Q15019 361 aa21.98■■□□□ 1.11
HDAC6-205ENST00000423941 NOM1Q5C9Z4 860 aaKnown RBP21.98■■□□□ 1.11
HDAC6-205ENST00000423941 OTUD7BQ6GQQ9 843 aa21.98■■□□□ 1.11
HDAC6-205ENST00000423941 FASTKD5Q7L8L6 764 aaKnown RBP21.98■■□□□ 1.11
HDAC6-205ENST00000423941 C19orf81C9J6K1 198 aa21.97■■□□□ 1.11
HDAC6-205ENST00000423941 CTCFP49711 727 aaPredicted RBP21.97■■□□□ 1.11
HDAC6-205ENST00000423941 PROCA1Q8NCQ7 364 aaPredicted RBP21.97■■□□□ 1.11
HDAC6-205ENST00000423941 NBPF3Q9H094 633 aa21.97■■□□□ 1.11
HDAC6-205ENST00000423941 ZNF287Q9HBT7 754 aa21.97■■□□□ 1.11
HDAC6-205ENST00000423941 IGKV6D-41A0A0C4DH26 115 aa21.96■■□□□ 1.11
HDAC6-205ENST00000423941 USP17L10C9JJH3 530 aa21.96■■□□□ 1.11
HDAC6-205ENST00000423941 SLC3A2P08195 630 aaKnown RBP21.96■■□□□ 1.11
HDAC6-205ENST00000423941 CTDSPL2Q05D32 466 aa21.96■■□□□ 1.11
HDAC6-205ENST00000423941 PDE4BQ07343 736 aa21.96■■□□□ 1.11
HDAC6-205ENST00000423941 KIAA1683Q9H0B3 1180 aa21.96■■□□□ 1.11
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms