RNA–Protein interactions for RNA: ENST00000423567.1

USP49-204, Transcript of ubiquitin specific peptidase 49, humanhuman

TSL 2

Gene USP49, Length 752 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP49-204ENST00000423567 FAM43AQ8N2R8 423 aa13.16□□□□□ -0.3
USP49-204ENST00000423567 SDR42E1Q8WUS8 393 aa13.16□□□□□ -0.3
USP49-204ENST00000423567 APPBP2Q92624 585 aa13.16□□□□□ -0.3
USP49-204ENST00000423567 LNPKQ9C0E8 428 aa13.16□□□□□ -0.3
USP49-204ENST00000423567 DCP1AQ9NPI6 582 aaPredicted RBP13.16□□□□□ -0.3
USP49-204ENST00000423567 MYO5AQ9Y4I1 1855 aaKnown RBP13.16□□□□□ -0.3
USP49-204ENST00000423567 A0A0G2JLL6 359 aaPredicted RBP13.15□□□□□ -0.3
USP49-204ENST00000423567 IGHDP01880 384 aa13.15□□□□□ -0.3
USP49-204ENST00000423567 PDE1AP54750 535 aa13.15□□□□□ -0.3
USP49-204ENST00000423567 SLFNL1Q499Z3 407 aa13.15□□□□□ -0.3
USP49-204ENST00000423567 IFFO2Q5TF58 517 aa13.15□□□□□ -0.3
USP49-204ENST00000423567 GADL1Q6ZQY3 521 aa13.15□□□□□ -0.3
USP49-204ENST00000423567 PRRT2Q7Z6L0 340 aaPredicted RBP13.15□□□□□ -0.3
USP49-204ENST00000423567 CTU1Q7Z7A3 348 aaKnown RBP13.15□□□□□ -0.3
USP49-204ENST00000423567 CHD1LQ86WJ1 897 aa13.15□□□□□ -0.3
USP49-204ENST00000423567 PUS7LQ9H0K6 701 aaKnown RBP13.15□□□□□ -0.3
USP49-204ENST00000423567 R3HDMLQ9H3Y0 253 aa13.15□□□□□ -0.3
USP49-204ENST00000423567 STAP2Q9UGK3 403 aa13.15□□□□□ -0.3
USP49-204ENST00000423567 AFG3L2Q9Y4W6 797 aa13.15□□□□□ -0.3
USP49-204ENST00000423567 SLC4A4Q9Y6R1 1079 aa13.15□□□□□ -0.3
USP49-204ENST00000423567 PDHXO00330 501 aa13.14□□□□□ -0.31
USP49-204ENST00000423567 PRKAB2O43741 272 aa13.14□□□□□ -0.31
USP49-204ENST00000423567 GDF11O95390 407 aa13.14□□□□□ -0.31
USP49-204ENST00000423567 NUCB1Q02818 461 aa13.14□□□□□ -0.31
USP49-204ENST00000423567 ARHGEF6Q15052 776 aa13.14□□□□□ -0.31
USP49-204ENST00000423567 ZNF280CQ8ND82 737 aa13.14□□□□□ -0.31
USP49-204ENST00000423567 EVI5LQ96CN4 794 aa13.14□□□□□ -0.31
USP49-204ENST00000423567 ERO1AQ96HE7 468 aa13.14□□□□□ -0.31
USP49-204ENST00000423567 PARK7Q99497 189 aaKnown RBP13.14□□□□□ -0.31
USP49-204ENST00000423567 MCOLN1Q9GZU1 580 aa13.14□□□□□ -0.31
USP49-204ENST00000423567 DNAJC18Q9H819 358 aa13.14□□□□□ -0.31
USP49-204ENST00000423567 CABP5Q9NP86 173 aa13.14□□□□□ -0.31
USP49-204ENST00000423567 TAOK2Q9UL54 1235 aa13.14□□□□□ -0.31
USP49-204ENST00000423567 SALL3Q9BXA9 1300 aa13.13□□□□□ -0.31
USP49-204ENST00000423567 CHGBP05060 677 aa13.13□□□□□ -0.31
USP49-204ENST00000423567 GNAT2P19087 354 aa13.13□□□□□ -0.31
USP49-204ENST00000423567 PLCD1P51178 756 aa13.13□□□□□ -0.31
USP49-204ENST00000423567 SP3Q02447 781 aa13.13□□□□□ -0.31
USP49-204ENST00000423567 SPP2Q13103 211 aa13.13□□□□□ -0.31
USP49-204ENST00000423567 RRP1BQ14684 758 aaKnown RBP13.13□□□□□ -0.31
USP49-204ENST00000423567 CERKLQ49MI3 558 aaPredicted RBP13.13□□□□□ -0.31
USP49-204ENST00000423567 TATDN1Q6P1N9 297 aa13.13□□□□□ -0.31
USP49-204ENST00000423567 CCDC84Q86UT8 332 aaPredicted RBP13.13□□□□□ -0.31
USP49-204ENST00000423567 FRMD4AQ9P2Q2 1039 aaPredicted RBP13.13□□□□□ -0.31
USP49-204ENST00000423567 ZBTB21Q9ULJ3 1066 aa13.13□□□□□ -0.31
USP49-204ENST00000423567 TRIM6-TRIM34B2RNG4 842 aa13.12□□□□□ -0.31
USP49-204ENST00000423567 GPAA1O43292 621 aa13.12□□□□□ -0.31
USP49-204ENST00000423567 TLR2O60603 784 aa13.12□□□□□ -0.31
USP49-204ENST00000423567 PABPC4Q13310 644 aaKnown RBP eCLIP13.12□□□□□ -0.31
USP49-204ENST00000423567 KIF22Q14807 665 aa13.12□□□□□ -0.31
USP49-204ENST00000423567 PKN2Q16513 984 aaKnown RBP13.12□□□□□ -0.31
USP49-204ENST00000423567 ABCB5Q2M3G0 1257 aa13.12□□□□□ -0.31
USP49-204ENST00000423567 PROCA1Q8NCQ7 364 aaPredicted RBP13.12□□□□□ -0.31
USP49-204ENST00000423567 OSBP2Q969R2 916 aa13.12□□□□□ -0.31
USP49-204ENST00000423567 DCBLD2Q96PD2 775 aa13.12□□□□□ -0.31
USP49-204ENST00000423567 STRBPQ96SI9 672 aaKnown RBP13.12□□□□□ -0.31
USP49-204ENST00000423567 WDR18Q9BV38 432 aa13.12□□□□□ -0.31
USP49-204ENST00000423567 TMOD4Q9NZQ9 345 aa13.12□□□□□ -0.31
USP49-204ENST00000423567 SWAP70Q9UH65 585 aa13.12□□□□□ -0.31
USP49-204ENST00000423567 DOCK1Q14185 1865 aa13.12□□□□□ -0.31
USP49-204ENST00000423567 LAMB1P07942 1786 aa13.12□□□□□ -0.31
USP49-204ENST00000423567 FOCADQ5VW36 1801 aa13.11□□□□□ -0.31
USP49-204ENST00000423567 USP17L12C9JPN9 530 aa13.11□□□□□ -0.31
USP49-204ENST00000423567 USP17L21D6R901 530 aa13.11□□□□□ -0.31
USP49-204ENST00000423567 MPHOSPH10O00566 681 aaKnown RBP13.11□□□□□ -0.31
USP49-204ENST00000423567 GH2P01242 217 aa13.11□□□□□ -0.31
USP49-204ENST00000423567 APPP05067 770 aa13.11□□□□□ -0.31
USP49-204ENST00000423567 MOGSQ13724 837 aa13.11□□□□□ -0.31
USP49-204ENST00000423567 RAB3GAP1Q15042 981 aa13.11□□□□□ -0.31
USP49-204ENST00000423567 GPAT2Q6NUI2 795 aa13.11□□□□□ -0.31
USP49-204ENST00000423567 GIMAP6Q6P9H5 292 aa13.11□□□□□ -0.31
USP49-204ENST00000423567 ABHD8Q96I13 439 aa13.11□□□□□ -0.31
USP49-204ENST00000423567 NACAP1Q9BZK3 213 aa13.11□□□□□ -0.31
USP49-204ENST00000423567 ARPP21Q9UBL0 812 aaPredicted RBP13.11□□□□□ -0.31
USP49-204ENST00000423567 PNMA3Q9UL41 463 aa13.11□□□□□ -0.31
USP49-204ENST00000423567 SLC45A1Q9Y2W3 748 aa13.11□□□□□ -0.31
USP49-204ENST00000423567 CASP8AP2Q9UKL3 1982 aa13.11□□□□□ -0.31
USP49-204ENST00000423567 C19orf81C9J6K1 198 aa13.1□□□□□ -0.31
USP49-204ENST00000423567 USP17L10C9JJH3 530 aa13.1□□□□□ -0.31
USP49-204ENST00000423567 M0R2C6 588 aa13.1□□□□□ -0.31
USP49-204ENST00000423567 CYP2D6P10635 497 aa13.1□□□□□ -0.31
USP49-204ENST00000423567 SHMT1P34896 483 aa13.1□□□□□ -0.31
USP49-204ENST00000423567 TDO2P48775 406 aa13.1□□□□□ -0.31
USP49-204ENST00000423567 HMGCS2P54868 508 aa13.1□□□□□ -0.31
USP49-204ENST00000423567 BACE1P56817 501 aa13.1□□□□□ -0.31
USP49-204ENST00000423567 GABPAQ06546 454 aa13.1□□□□□ -0.31
USP49-204ENST00000423567 MTMR2Q13614 643 aa13.1□□□□□ -0.31
USP49-204ENST00000423567 ZMYM1Q5SVZ6 1142 aa13.1□□□□□ -0.31
USP49-204ENST00000423567 C12orf60Q5U649 245 aa13.1□□□□□ -0.31
USP49-204ENST00000423567 TICAM2Q86XR7 235 aa13.1□□□□□ -0.31
USP49-204ENST00000423567 CD99L2Q8TCZ2 262 aa13.1□□□□□ -0.31
USP49-204ENST00000423567 SMCR8Q8TEV9 937 aaPredicted RBP13.1□□□□□ -0.31
USP49-204ENST00000423567 KIF12Q96FN5 646 aa13.1□□□□□ -0.31
USP49-204ENST00000423567 MS4A3Q96HJ5 214 aa13.1□□□□□ -0.31
USP49-204ENST00000423567 FEZ1Q99689 392 aa13.1□□□□□ -0.31
USP49-204ENST00000423567 AGTPBP1Q9UPW5 1226 aa13.1□□□□□ -0.31
USP49-204ENST00000423567 TRIM17Q9Y577 477 aa13.1□□□□□ -0.31
USP49-204ENST00000423567 CDK5RAP2Q96SN8 1893 aa13.1□□□□□ -0.31
USP49-204ENST00000423567 OSBPP22059 807 aa13.09□□□□□ -0.31
USP49-204ENST00000423567 USP14P54578 494 aa13.09□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms