RNA–Protein interactions for RNA: ENST00000422379.2

HPS4-204, Transcript of HPS4, biogenesis of lysosomal organelles complex 3 subunit 2, humanhuman

TSL 5

Gene HPS4, Length 1,942 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4-204ENST00000422379 GLTPD2A6NH11 291 aa10.55□□□□□ -0.72
HPS4-204ENST00000422379 AKR1B1P15121 316 aa10.55□□□□□ -0.72
HPS4-204ENST00000422379 MCM4P33991 863 aa10.55□□□□□ -0.72
HPS4-204ENST00000422379 TRDNQ13061 729 aa10.55□□□□□ -0.72
HPS4-204ENST00000422379 RAB3GAP1Q15042 981 aa10.55□□□□□ -0.72
HPS4-204ENST00000422379 ENAHQ8N8S7 591 aaPredicted RBP10.55□□□□□ -0.72
HPS4-204ENST00000422379 CSRNP1Q96S65 589 aa10.55□□□□□ -0.72
HPS4-204ENST00000422379 KRT23Q9C075 422 aa10.55□□□□□ -0.72
HPS4-204ENST00000422379 EHD4Q9H223 541 aa10.55□□□□□ -0.72
HPS4-204ENST00000422379 GGA3Q9NZ52 723 aa10.55□□□□□ -0.72
HPS4-204ENST00000422379 LIMCH1Q9UPQ0 1083 aa10.55□□□□□ -0.72
HPS4-204ENST00000422379 WDR19Q8NEZ3 1342 aa10.55□□□□□ -0.72
HPS4-204ENST00000422379 MMP14P50281 582 aa10.54□□□□□ -0.72
HPS4-204ENST00000422379 EVCP57679 992 aa10.54□□□□□ -0.72
HPS4-204ENST00000422379 TFAP4Q01664 338 aa10.54□□□□□ -0.72
HPS4-204ENST00000422379 CUL4AQ13619 759 aa10.54□□□□□ -0.72
HPS4-204ENST00000422379 TTC6Q86TZ1 520 aa10.54□□□□□ -0.72
HPS4-204ENST00000422379 FAM83AQ86UY5 434 aa10.54□□□□□ -0.72
HPS4-204ENST00000422379 ZSCAN29Q8IWY8 852 aaPredicted RBP10.54□□□□□ -0.72
HPS4-204ENST00000422379 ESR2Q92731 530 aa10.54□□□□□ -0.72
HPS4-204ENST00000422379 MYL10Q9BUA6 226 aa10.54□□□□□ -0.72
HPS4-204ENST00000422379 PI4KBQ9UBF8 816 aa10.54□□□□□ -0.72
HPS4-204ENST00000422379 ANGEL1Q9UNK9 670 aaKnown RBP10.54□□□□□ -0.72
HPS4-204ENST00000422379 TNKSO95271 1327 aa10.54□□□□□ -0.72
HPS4-204ENST00000422379 ZC3H4Q9UPT8 1303 aaKnown RBP10.54□□□□□ -0.72
HPS4-204ENST00000422379 DCAF8L1A6NGE4 600 aa10.54□□□□□ -0.72
HPS4-204ENST00000422379 IFIT3O14879 490 aaKnown RBP10.54□□□□□ -0.72
HPS4-204ENST00000422379 POTEIP0CG38 1075 aa10.54□□□□□ -0.72
HPS4-204ENST00000422379 POTEJP0CG39 1038 aa10.54□□□□□ -0.72
HPS4-204ENST00000422379 PCP11498 1178 aaKnown RBP10.54□□□□□ -0.72
HPS4-204ENST00000422379 RXRAP19793 462 aa10.54□□□□□ -0.72
HPS4-204ENST00000422379 PDIA3P30101 505 aaKnown RBP10.54□□□□□ -0.72
HPS4-204ENST00000422379 MCM2P49736 904 aa10.54□□□□□ -0.72
HPS4-204ENST00000422379 PDE4BQ07343 736 aa10.54□□□□□ -0.72
HPS4-204ENST00000422379 STK3Q13188 491 aa10.54□□□□□ -0.72
HPS4-204ENST00000422379 TMEM67Q5HYA8 995 aa10.54□□□□□ -0.72
HPS4-204ENST00000422379 RASGRP2Q7LDG7 609 aa10.54□□□□□ -0.72
HPS4-204ENST00000422379 TNPO1Q92973 898 aaKnown RBP10.54□□□□□ -0.72
HPS4-204ENST00000422379 ZSCAN10Q96SZ4 725 aaPredicted RBP10.54□□□□□ -0.72
HPS4-204ENST00000422379 DEFB129Q9H1M3 183 aa10.54□□□□□ -0.72
HPS4-204ENST00000422379 DHX36Q9H2U1 1008 aaKnown RBP10.54□□□□□ -0.72
HPS4-204ENST00000422379 MKNK2Q9HBH9 465 aa10.54□□□□□ -0.72
HPS4-204ENST00000422379 NCOA5Q9HCD5 579 aaKnown RBP10.54□□□□□ -0.72
HPS4-204ENST00000422379 ADARB2Q9NS39 739 aaKnown RBP10.54□□□□□ -0.72
HPS4-204ENST00000422379 TMOD2Q9NZR1 351 aa10.54□□□□□ -0.72
HPS4-204ENST00000422379 FRMD4AQ9P2Q2 1039 aaPredicted RBP10.54□□□□□ -0.72
HPS4-204ENST00000422379 FZD1Q9UP38 647 aa10.54□□□□□ -0.72
HPS4-204ENST00000422379 SSC5DA1L4H1 1573 aa10.54□□□□□ -0.72
HPS4-204ENST00000422379 MYO1BO43795 1136 aa10.53□□□□□ -0.72
HPS4-204ENST00000422379 SLC3A2P08195 630 aaKnown RBP10.53□□□□□ -0.72
HPS4-204ENST00000422379 SCRN1Q12765 414 aa10.53□□□□□ -0.72
HPS4-204ENST00000422379 NBPF12Q5TAG4 269 aaPredicted RBP10.53□□□□□ -0.72
HPS4-204ENST00000422379 TATDN1Q6P1N9 297 aa10.53□□□□□ -0.72
HPS4-204ENST00000422379 MIGA2Q7L4E1 593 aa10.53□□□□□ -0.72
HPS4-204ENST00000422379 AMOTL1Q8IY63 956 aa10.53□□□□□ -0.72
HPS4-204ENST00000422379 IGKV6D-41A0A0C4DH26 115 aa10.52□□□□□ -0.72
HPS4-204ENST00000422379 KLF18A0A0U1RQI7 1052 aa10.52□□□□□ -0.72
HPS4-204ENST00000422379 TSPY2A6NKD2 308 aa10.52□□□□□ -0.72
HPS4-204ENST00000422379 PPFIA3O75145 1194 aa10.52□□□□□ -0.72
HPS4-204ENST00000422379 CTDNEP1O95476 244 aa10.52□□□□□ -0.72
HPS4-204ENST00000422379 HLA-DOAP06340 250 aa10.52□□□□□ -0.72
HPS4-204ENST00000422379 GUCY1A2P33402 732 aa10.52□□□□□ -0.72
HPS4-204ENST00000422379 EPHX2P34913 555 aa10.52□□□□□ -0.72
HPS4-204ENST00000422379 DPY19L2Q6NUT2 758 aa10.52□□□□□ -0.72
HPS4-204ENST00000422379 SGMS1Q86VZ5 419 aa10.52□□□□□ -0.72
HPS4-204ENST00000422379 CCDC83Q8IWF9 413 aa10.52□□□□□ -0.72
HPS4-204ENST00000422379 IL27Q8NEV9 243 aa10.52□□□□□ -0.72
HPS4-204ENST00000422379 TMEM87BQ96K49 555 aa10.52□□□□□ -0.72
HPS4-204ENST00000422379 TAF1DQ9H5J8 278 aaPredicted RBP10.52□□□□□ -0.72
HPS4-204ENST00000422379 FAM217BQ9NTX9 383 aaPredicted RBP10.52□□□□□ -0.72
HPS4-204ENST00000422379 GREB1LQ9C091 1923 aaPredicted RBP10.52□□□□□ -0.73
HPS4-204ENST00000422379 ADM5C9JUS6 153 aa10.52□□□□□ -0.73
HPS4-204ENST00000422379 GDF11O95390 407 aa10.52□□□□□ -0.73
HPS4-204ENST00000422379 LMOD1P29536 600 aaPredicted RBP10.52□□□□□ -0.73
HPS4-204ENST00000422379 LIFRP42702 1097 aa10.52□□□□□ -0.73
HPS4-204ENST00000422379 NOVP48745 357 aa10.52□□□□□ -0.73
HPS4-204ENST00000422379 CCT2P78371 535 aaKnown RBP10.52□□□□□ -0.73
HPS4-204ENST00000422379 FGD1P98174 961 aa10.52□□□□□ -0.73
HPS4-204ENST00000422379 MAP3K10Q02779 954 aa10.52□□□□□ -0.73
HPS4-204ENST00000422379 APOA5Q6Q788 366 aa10.52□□□□□ -0.73
HPS4-204ENST00000422379 SIAH1Q8IUQ4 282 aa10.52□□□□□ -0.73
HPS4-204ENST00000422379 ZNF444Q8N0Y2 327 aaPredicted RBP10.52□□□□□ -0.73
HPS4-204ENST00000422379 NEDD1Q8NHV4 660 aa10.52□□□□□ -0.73
HPS4-204ENST00000422379 CEP95Q96GE4 821 aa10.52□□□□□ -0.73
HPS4-204ENST00000422379 WDR90Q96KV7 1748 aa10.52□□□□□ -0.73
HPS4-204ENST00000422379 PLIN4Q96Q06 1357 aa10.51□□□□□ -0.73
HPS4-204ENST00000422379 GOLGA8BA8MQT2 603 aa10.51□□□□□ -0.73
HPS4-204ENST00000422379 JAK2O60674 1132 aa10.51□□□□□ -0.73
HPS4-204ENST00000422379 PFKFB2O60825 505 aa10.51□□□□□ -0.73
HPS4-204ENST00000422379 TSPY3P0CV98 308 aa10.51□□□□□ -0.73
HPS4-204ENST00000422379 TSPY8P0CW00 308 aa10.51□□□□□ -0.73
HPS4-204ENST00000422379 CDC27P30260 824 aa10.51□□□□□ -0.73
HPS4-204ENST00000422379 GSE1Q14687 1217 aa10.51□□□□□ -0.73
HPS4-204ENST00000422379 ANKRD1Q15327 319 aa10.51□□□□□ -0.73
HPS4-204ENST00000422379 FOXP4Q8IVH2 680 aaPredicted RBP10.51□□□□□ -0.73
HPS4-204ENST00000422379 CCDC144CPQ8IYA2 1237 aa10.51□□□□□ -0.73
HPS4-204ENST00000422379 CRACR2BQ8N4Y2 399 aaPredicted RBP10.51□□□□□ -0.73
HPS4-204ENST00000422379 GTF3C6Q969F1 213 aa10.51□□□□□ -0.73
HPS4-204ENST00000422379 UBAC1Q9BSL1 405 aa10.51□□□□□ -0.73
HPS4-204ENST00000422379 CWC22Q9HCG8 908 aaKnown RBP10.51□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 40.6 ms