RNA–Protein interactions for RNA: ENST00000421664.1

EFEMP1-203, Transcript of EGF containing fibulin extracellular matrix protein 1, humanhuman

TSL 4

Gene EFEMP1, Length 547 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EFEMP1-203ENST00000421664 SHROOM1Q2M3G4 852 aaPredicted RBP19.63■□□□□ 0.73
EFEMP1-203ENST00000421664 GINM1Q9NU53 330 aa19.63■□□□□ 0.73
EFEMP1-203ENST00000421664 FRMD4AQ9P2Q2 1039 aaPredicted RBP19.63■□□□□ 0.73
EFEMP1-203ENST00000421664 MANSC4A6NHS7 340 aaPredicted RBP19.62■□□□□ 0.73
EFEMP1-203ENST00000421664 IRF6O14896 467 aa19.62■□□□□ 0.73
EFEMP1-203ENST00000421664 GDF11O95390 407 aa19.62■□□□□ 0.73
EFEMP1-203ENST00000421664 ASNSP08243 561 aa19.62■□□□□ 0.73
EFEMP1-203ENST00000421664 REM2Q8IYK8 340 aaPredicted RBP19.62■□□□□ 0.73
EFEMP1-203ENST00000421664 RUFY2Q8WXA3 655 aa19.62■□□□□ 0.73
EFEMP1-203ENST00000421664 MS4A4AQ96JQ5 239 aa19.62■□□□□ 0.73
EFEMP1-203ENST00000421664 ZBTB21Q9ULJ3 1066 aa19.62■□□□□ 0.73
EFEMP1-203ENST00000421664 KCNH4Q9UQ05 1017 aa19.62■□□□□ 0.73
EFEMP1-203ENST00000421664 MYH8P13535 1937 aa19.61■□□□□ 0.73
EFEMP1-203ENST00000421664 MINDY4BA8MYZ0 360 aa19.61■□□□□ 0.73
EFEMP1-203ENST00000421664 SGSM2O43147 1006 aa19.61■□□□□ 0.73
EFEMP1-203ENST00000421664 CDK8P49336 464 aa19.61■□□□□ 0.73
EFEMP1-203ENST00000421664 MAP2K1Q02750 393 aaPredicted RBP19.61■□□□□ 0.73
EFEMP1-203ENST00000421664 PPARAQ07869 468 aa19.61■□□□□ 0.73
EFEMP1-203ENST00000421664 SREBF2Q12772 1141 aa19.61■□□□□ 0.73
EFEMP1-203ENST00000421664 CERKLQ49MI3 558 aaPredicted RBP19.61■□□□□ 0.73
EFEMP1-203ENST00000421664 ZHX2Q9Y6X8 837 aa19.61■□□□□ 0.73
EFEMP1-203ENST00000421664 LAMA4Q16363 1823 aa19.6■□□□□ 0.73
EFEMP1-203ENST00000421664 TESPA1A2RU30 521 aaPredicted RBP19.6■□□□□ 0.73
EFEMP1-203ENST00000421664 GH2P01242 217 aa19.6■□□□□ 0.73
EFEMP1-203ENST00000421664 FGAP02671 866 aa19.6■□□□□ 0.73
EFEMP1-203ENST00000421664 TM4SF4P48230 202 aa19.6■□□□□ 0.73
EFEMP1-203ENST00000421664 GTF2A2P52657 109 aa19.6■□□□□ 0.73
EFEMP1-203ENST00000421664 CCDC84Q86UT8 332 aaPredicted RBP19.6■□□□□ 0.73
EFEMP1-203ENST00000421664 DSCC1Q9BVC3 393 aa19.6■□□□□ 0.73
EFEMP1-203ENST00000421664 TBC1D2Q9BYX2 928 aa19.6■□□□□ 0.73
EFEMP1-203ENST00000421664 WBP1LQ9NX94 342 aa19.6■□□□□ 0.73
EFEMP1-203ENST00000421664 ANAPC4Q9UJX5 808 aa19.6■□□□□ 0.73
EFEMP1-203ENST00000421664 AFG3L2Q9Y4W6 797 aa19.6■□□□□ 0.73
EFEMP1-203ENST00000421664 PTPRFP10586 1907 aa19.59■□□□□ 0.73
EFEMP1-203ENST00000421664 USP17L5A8MUK1 530 aa19.59■□□□□ 0.73
EFEMP1-203ENST00000421664 INHBEP58166 350 aa19.59■□□□□ 0.73
EFEMP1-203ENST00000421664 SNAPC2Q13487 334 aa19.59■□□□□ 0.73
EFEMP1-203ENST00000421664 ABCB5Q2M3G0 1257 aa19.59■□□□□ 0.73
EFEMP1-203ENST00000421664 GREB1LQ9C091 1923 aaPredicted RBP19.59■□□□□ 0.73
EFEMP1-203ENST00000421664 CXCL11O14625 94 aa19.58■□□□□ 0.72
EFEMP1-203ENST00000421664 RASA1P20936 1047 aa19.58■□□□□ 0.72
EFEMP1-203ENST00000421664 BRI3BPQ8WY22 251 aa19.58■□□□□ 0.72
EFEMP1-203ENST00000421664 CCDC17Q96LX7 622 aa19.58■□□□□ 0.72
EFEMP1-203ENST00000421664 WDR18Q9BV38 432 aa19.58■□□□□ 0.72
EFEMP1-203ENST00000421664 PCNTO95613 3336 aa19.58■□□□□ 0.72
EFEMP1-203ENST00000421664 CCL15-CCL14A0A0B4J2E2 113 aa19.57■□□□□ 0.72
EFEMP1-203ENST00000421664 CDC45O75419 566 aa19.57■□□□□ 0.72
EFEMP1-203ENST00000421664 CETPP11597 493 aa19.57■□□□□ 0.72
EFEMP1-203ENST00000421664 GUCY1A2P33402 732 aa19.57■□□□□ 0.72
EFEMP1-203ENST00000421664 CCL15Q16663 113 aa19.57■□□□□ 0.72
EFEMP1-203ENST00000421664 ZNF280CQ8ND82 737 aa19.57■□□□□ 0.72
EFEMP1-203ENST00000421664 ESYT1Q9BSJ8 1104 aa19.57■□□□□ 0.72
EFEMP1-203ENST00000421664 DDX52Q9Y2R4 599 aaKnown RBP eCLIP19.57■□□□□ 0.72
EFEMP1-203ENST00000421664 A0A0G2JLL6 359 aaPredicted RBP19.56■□□□□ 0.72
EFEMP1-203ENST00000421664 IGF2BP3O00425 579 aaKnown RBP eCLIP19.56■□□□□ 0.72
EFEMP1-203ENST00000421664 SLC3A2P08195 630 aaKnown RBP19.56■□□□□ 0.72
EFEMP1-203ENST00000421664 AKR1B1P15121 316 aa19.56■□□□□ 0.72
EFEMP1-203ENST00000421664 MOGSQ13724 837 aa19.56■□□□□ 0.72
EFEMP1-203ENST00000421664 TMEM179Q6ZVK1 233 aa19.56■□□□□ 0.72
EFEMP1-203ENST00000421664 PRRT2Q7Z6L0 340 aaPredicted RBP19.56■□□□□ 0.72
EFEMP1-203ENST00000421664 IFNL1Q8IU54 200 aa19.56■□□□□ 0.72
EFEMP1-203ENST00000421664 PTPN18Q99952 460 aa19.56■□□□□ 0.72
EFEMP1-203ENST00000421664 NBPF3Q9H094 633 aa19.56■□□□□ 0.72
EFEMP1-203ENST00000421664 AS3MTQ9HBK9 375 aa19.56■□□□□ 0.72
EFEMP1-203ENST00000421664 ZNF287Q9HBT7 754 aa19.56■□□□□ 0.72
EFEMP1-203ENST00000421664 CABP5Q9NP86 173 aa19.56■□□□□ 0.72
EFEMP1-203ENST00000421664 LOC285556D6RIA3 1793 aa19.56■□□□□ 0.72
EFEMP1-203ENST00000421664 TRIM75PA6NK02 468 aa19.55■□□□□ 0.72
EFEMP1-203ENST00000421664 HSPA1AP0DMV8 641 aaKnown RBP19.55■□□□□ 0.72
EFEMP1-203ENST00000421664 HSPA1BP0DMV9 641 aaKnown RBP19.55■□□□□ 0.72
EFEMP1-203ENST00000421664 CTDSPL2Q05D32 466 aa19.55■□□□□ 0.72
EFEMP1-203ENST00000421664 PDE4BQ07343 736 aa19.55■□□□□ 0.72
EFEMP1-203ENST00000421664 SPP2Q13103 211 aa19.55■□□□□ 0.72
EFEMP1-203ENST00000421664 STK11IPQ8N1F8 1099 aa19.55■□□□□ 0.72
EFEMP1-203ENST00000421664 SAGE1Q9NXZ1 904 aa19.55■□□□□ 0.72
EFEMP1-203ENST00000421664 TACC3Q9Y6A5 838 aa19.55■□□□□ 0.72
EFEMP1-203ENST00000421664 MPHOSPH10O00566 681 aaKnown RBP19.54■□□□□ 0.72
EFEMP1-203ENST00000421664 CA12O43570 354 aa19.54■□□□□ 0.72
EFEMP1-203ENST00000421664 FGRP09769 529 aa19.54■□□□□ 0.72
EFEMP1-203ENST00000421664 PTH1RQ03431 593 aa19.54■□□□□ 0.72
EFEMP1-203ENST00000421664 SEPT2Q15019 361 aa19.54■□□□□ 0.72
EFEMP1-203ENST00000421664 RAB3GAP1Q15042 981 aa19.54■□□□□ 0.72
EFEMP1-203ENST00000421664 GNL3Q9BVP2 549 aaKnown RBP eCLIP19.54■□□□□ 0.72
EFEMP1-203ENST00000421664 MKNK2Q9HBH9 465 aa19.54■□□□□ 0.72
EFEMP1-203ENST00000421664 RNF186Q9NXI6 227 aa19.54■□□□□ 0.72
EFEMP1-203ENST00000421664 PLIN4Q96Q06 1357 aa19.54■□□□□ 0.72
EFEMP1-203ENST00000421664 PRDM1O75626 825 aa19.53■□□□□ 0.72
EFEMP1-203ENST00000421664 HAND2P61296 217 aa19.53■□□□□ 0.72
EFEMP1-203ENST00000421664 SH3D19Q5HYK7 790 aa19.53■□□□□ 0.72
EFEMP1-203ENST00000421664 TBC1D10CQ8IV04 446 aa19.53■□□□□ 0.72
EFEMP1-203ENST00000421664 BEGAINQ9BUH8 593 aa19.53■□□□□ 0.72
EFEMP1-203ENST00000421664 ZCCHC17Q9NP64 241 aaKnown RBP19.53■□□□□ 0.72
EFEMP1-203ENST00000421664 CTNNA3Q9UI47 895 aa19.53■□□□□ 0.72
EFEMP1-203ENST00000421664 BTBD19C9JJ37 291 aa19.52■□□□□ 0.72
EFEMP1-203ENST00000421664 ORC4O43929 436 aa19.52■□□□□ 0.72
EFEMP1-203ENST00000421664 ALDH1A1P00352 501 aa19.52■□□□□ 0.72
EFEMP1-203ENST00000421664 BACE1P56817 501 aa19.52■□□□□ 0.72
EFEMP1-203ENST00000421664 MTMR2Q13614 643 aa19.52■□□□□ 0.72
EFEMP1-203ENST00000421664 CASC1Q6TDU7 716 aa19.52■□□□□ 0.72
EFEMP1-203ENST00000421664 ANKRD23Q86SG2 305 aa19.52■□□□□ 0.72
Retrieved 100 of 20,778 RNA–protein pairs in 14.2 ms