RNA–Protein interactions for RNA: ENST00000421141.5

PTCH1-206, Transcript of patched 1, humanhuman

TSL 5 BASIC

Gene PTCH1, Length 7,659 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-206ENST00000421141 EXOC7Q9UPT5 735 aa12.12□□□□□ -0.47
PTCH1-206ENST00000421141 SLC8A3P57103 927 aa12.12□□□□□ -0.47
PTCH1-206ENST00000421141 SPATA31A5Q5VU36 1347 aa12.12□□□□□ -0.47
PTCH1-206ENST00000421141 USP31Q70CQ4 1352 aa12.12□□□□□ -0.47
PTCH1-206ENST00000421141 SPATA31A7Q8IWB4 1347 aa12.12□□□□□ -0.47
PTCH1-206ENST00000421141 IQUBQ8NA54 791 aa12.12□□□□□ -0.47
PTCH1-206ENST00000421141 CTNNBL1Q8WYA6 563 aaPredicted RBP12.12□□□□□ -0.47
PTCH1-206ENST00000421141 DHX58Q96C10 678 aa12.12□□□□□ -0.47
PTCH1-206ENST00000421141 CCDC169A6NNP5 214 aa12.11□□□□□ -0.47
PTCH1-206ENST00000421141 FAM47CQ5HY64 1035 aa12.11□□□□□ -0.47
PTCH1-206ENST00000421141 FAM47AQ5JRC9 791 aa12.11□□□□□ -0.47
PTCH1-206ENST00000421141 PI4KBQ9UBF8 816 aa12.11□□□□□ -0.47
PTCH1-206ENST00000421141 VWA3AA6NCI4 1184 aa12.11□□□□□ -0.47
PTCH1-206ENST00000421141 TTLL1O95922 423 aa12.11□□□□□ -0.47
PTCH1-206ENST00000421141 CCDC117Q8IWD4 279 aaPredicted RBP12.11□□□□□ -0.47
PTCH1-206ENST00000421141 MLXIPQ9HAP2 919 aa12.11□□□□□ -0.47
PTCH1-206ENST00000421141 ZEB2O60315 1214 aa12.11□□□□□ -0.47
PTCH1-206ENST00000421141 ALS2CR12Q96Q35 445 aa12.11□□□□□ -0.47
PTCH1-206ENST00000421141 FNBP1Q96RU3 617 aa12.11□□□□□ -0.47
PTCH1-206ENST00000421141 DDX39AO00148 427 aaKnown RBP12.11□□□□□ -0.47
PTCH1-206ENST00000421141 PHKA1P46020 1223 aa12.11□□□□□ -0.47
PTCH1-206ENST00000421141 SUSD4Q5VX71 490 aa12.11□□□□□ -0.47
PTCH1-206ENST00000421141 ZNF354CQ86Y25 554 aa12.11□□□□□ -0.47
PTCH1-206ENST00000421141 PLVAPQ9BX97 442 aa12.11□□□□□ -0.47
PTCH1-206ENST00000421141 GPR108Q9NPR9 543 aa12.11□□□□□ -0.47
PTCH1-206ENST00000421141 PSDA5PKW4 1024 aaPredicted RBP12.11□□□□□ -0.47
PTCH1-206ENST00000421141 R3HDM1Q15032 1099 aaKnown RBP12.11□□□□□ -0.47
PTCH1-206ENST00000421141 DPH6Q7L8W6 267 aa12.1□□□□□ -0.47
PTCH1-206ENST00000421141 GLG1Q92896 1179 aa12.1□□□□□ -0.47
PTCH1-206ENST00000421141 CCPG1Q9ULG6 757 aa12.1□□□□□ -0.47
PTCH1-206ENST00000421141 FRMPD2Q68DX3 1309 aaPredicted RBP12.1□□□□□ -0.47
PTCH1-206ENST00000421141 ALAS1P13196 640 aa12.1□□□□□ -0.47
PTCH1-206ENST00000421141 GDPD2Q9HCC8 539 aa12.1□□□□□ -0.47
PTCH1-206ENST00000421141 GCOM1H8Y6P7 765 aaPredicted RBP12.1□□□□□ -0.47
PTCH1-206ENST00000421141 POLR2MP0CAP2 368 aa12.1□□□□□ -0.47
PTCH1-206ENST00000421141 ARID4AP29374 1257 aaPredicted RBP12.1□□□□□ -0.47
PTCH1-206ENST00000421141 KCTD2Q14681 263 aa12.1□□□□□ -0.47
PTCH1-206ENST00000421141 SYNE4Q8N205 404 aa12.1□□□□□ -0.47
PTCH1-206ENST00000421141 GRPEL1Q9HAV7 217 aa12.1□□□□□ -0.47
PTCH1-206ENST00000421141 PIK3AP1Q6ZUJ8 805 aa12.1□□□□□ -0.47
PTCH1-206ENST00000421141 LRRC47Q8N1G4 583 aaKnown RBP12.1□□□□□ -0.47
PTCH1-206ENST00000421141 SPAG5Q96R06 1193 aa12.1□□□□□ -0.47
PTCH1-206ENST00000421141 TESPA1A2RU30 521 aaPredicted RBP12.1□□□□□ -0.47
PTCH1-206ENST00000421141 SGSM2O43147 1006 aa12.1□□□□□ -0.47
PTCH1-206ENST00000421141 ADD3Q9UEY8 706 aaKnown RBP12.1□□□□□ -0.47
PTCH1-206ENST00000421141 NOP2P46087 812 aaKnown RBP12.1□□□□□ -0.47
PTCH1-206ENST00000421141 LRRC7Q96NW7 1537 aa12.09□□□□□ -0.47
PTCH1-206ENST00000421141 NRXN1Q9ULB1 1477 aa12.09□□□□□ -0.47
PTCH1-206ENST00000421141 N4BP3O15049 544 aa12.09□□□□□ -0.47
PTCH1-206ENST00000421141 UBE3CQ15386 1083 aa12.09□□□□□ -0.47
PTCH1-206ENST00000421141 RC3H1Q5TC82 1133 aaKnown RBP12.09□□□□□ -0.47
PTCH1-206ENST00000421141 HOOK3Q86VS8 718 aa12.09□□□□□ -0.47
PTCH1-206ENST00000421141 METTL13Q8N6R0 699 aa12.09□□□□□ -0.47
PTCH1-206ENST00000421141 PRAMEF22A3QJZ6 481 aa12.09□□□□□ -0.47
PTCH1-206ENST00000421141 GAS7O60861 476 aa12.09□□□□□ -0.47
PTCH1-206ENST00000421141 ADORA1P30542 326 aa12.09□□□□□ -0.47
PTCH1-206ENST00000421141 KRT26Q7Z3Y9 468 aa12.09□□□□□ -0.47
PTCH1-206ENST00000421141 INTS4Q96HW7 963 aaKnown RBP12.09□□□□□ -0.47
PTCH1-206ENST00000421141 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP12.09□□□□□ -0.47
PTCH1-206ENST00000421141 MRVI1Q9Y6F6 885 aa12.09□□□□□ -0.47
PTCH1-206ENST00000421141 NR1I2O75469 434 aa12.09□□□□□ -0.47
PTCH1-206ENST00000421141 STAT2P52630 851 aa12.09□□□□□ -0.47
PTCH1-206ENST00000421141 ZNF174Q15697 407 aa12.09□□□□□ -0.47
PTCH1-206ENST00000421141 HLFQ16534 295 aa12.09□□□□□ -0.47
PTCH1-206ENST00000421141 CCDC125Q86Z20 511 aa12.09□□□□□ -0.47
PTCH1-206ENST00000421141 ZNF710Q8N1W2 664 aa12.09□□□□□ -0.47
PTCH1-206ENST00000421141 USP26Q9BXU7 913 aa12.09□□□□□ -0.47
PTCH1-206ENST00000421141 EPB41P11171 864 aaKnown RBP12.09□□□□□ -0.47
PTCH1-206ENST00000421141 CYP19A1P11511 503 aaPredicted RBP12.09□□□□□ -0.47
PTCH1-206ENST00000421141 PPP1R2P41236 205 aa12.09□□□□□ -0.47
PTCH1-206ENST00000421141 SERPINB13Q9UIV8 391 aa12.09□□□□□ -0.47
PTCH1-206ENST00000421141 DNM3Q9UQ16 869 aa12.09□□□□□ -0.47
PTCH1-206ENST00000421141 E7EWF7 191 aa12.09□□□□□ -0.47
PTCH1-206ENST00000421141 KCNQ2O43526 872 aa12.09□□□□□ -0.47
PTCH1-206ENST00000421141 RFX1P22670 979 aa12.09□□□□□ -0.47
PTCH1-206ENST00000421141 GSDMDP57764 484 aa12.09□□□□□ -0.47
PTCH1-206ENST00000421141 SPAG1Q07617 926 aa12.09□□□□□ -0.47
PTCH1-206ENST00000421141 AOC3Q16853 763 aa12.09□□□□□ -0.47
PTCH1-206ENST00000421141 WDR44Q5JSH3 913 aa12.09□□□□□ -0.47
PTCH1-206ENST00000421141 PSTPIP2Q9H939 334 aa12.09□□□□□ -0.47
PTCH1-206ENST00000421141 RGPD8O14715 1765 aaPredicted RBP12.09□□□□□ -0.47
PTCH1-206ENST00000421141 LTN1O94822 1766 aa12.09□□□□□ -0.47
PTCH1-206ENST00000421141 F13A1P00488 732 aa12.09□□□□□ -0.47
PTCH1-206ENST00000421141 NCAPH2Q6IBW4 605 aa12.09□□□□□ -0.47
PTCH1-206ENST00000421141 FBXO11Q86XK2 927 aa12.09□□□□□ -0.47
PTCH1-206ENST00000421141 GPATCH4Q5T3I0 446 aaKnown RBP12.08□□□□□ -0.48
PTCH1-206ENST00000421141 ECE2O60344 883 aa12.08□□□□□ -0.48
PTCH1-206ENST00000421141 CNNM4Q6P4Q7 775 aa12.08□□□□□ -0.48
PTCH1-206ENST00000421141 AP5M1Q9H0R1 490 aa12.08□□□□□ -0.48
PTCH1-206ENST00000421141 NONOQ15233 471 aaKnown RBP eCLIP12.08□□□□□ -0.48
PTCH1-206ENST00000421141 PLCD3Q8N3E9 789 aa12.08□□□□□ -0.48
PTCH1-206ENST00000421141 SNX21Q969T3 373 aa12.08□□□□□ -0.48
PTCH1-206ENST00000421141 TRPC6Q9Y210 931 aa12.08□□□□□ -0.48
PTCH1-206ENST00000421141 FNBP4Q8N3X1 1017 aaPredicted RBP12.08□□□□□ -0.48
PTCH1-206ENST00000421141 CD163L1Q9NR16 1453 aa12.08□□□□□ -0.48
PTCH1-206ENST00000421141 CALUO43852 315 aaPredicted RBP12.08□□□□□ -0.48
PTCH1-206ENST00000421141 CASQ1P31415 396 aa12.08□□□□□ -0.48
PTCH1-206ENST00000421141 ACTN2P35609 894 aa12.08□□□□□ -0.48
PTCH1-206ENST00000421141 ASPRV1Q53RT3 343 aa12.08□□□□□ -0.48
PTCH1-206ENST00000421141 PNMA1Q8ND90 353 aa12.08□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 7.5 ms