RNA–Protein interactions for RNA: ENST00000420239.6

CHD2-202, Transcript of chromodomain helicase DNA binding protein 2, humanhuman

TSL 1 (best) BASIC

Gene CHD2, Length 2,221 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD2-202ENST00000420239 UBASH3AP57075 661 aa6.96□□□□□ -1.3
CHD2-202ENST00000420239 GRIPAP1Q4V328 841 aa6.96□□□□□ -1.3
CHD2-202ENST00000420239 SND1Q7KZF4 910 aaKnown RBP eCLIP6.96□□□□□ -1.3
CHD2-202ENST00000420239 FBXL16Q8N461 479 aa6.96□□□□□ -1.3
CHD2-202ENST00000420239 AFAP1L1Q8TED9 768 aa6.96□□□□□ -1.3
CHD2-202ENST00000420239 COL15A1P39059 1388 aa6.96□□□□□ -1.3
CHD2-202ENST00000420239 ZC3H4Q9UPT8 1303 aaKnown RBP6.95□□□□□ -1.3
CHD2-202ENST00000420239 PTPDC1A2A3K4 754 aa6.95□□□□□ -1.3
CHD2-202ENST00000420239 RAPGEF3O95398 923 aa6.95□□□□□ -1.3
CHD2-202ENST00000420239 YEATS4O95619 227 aa6.95□□□□□ -1.3
CHD2-202ENST00000420239 TOP1P11387 765 aaKnown RBP6.95□□□□□ -1.3
CHD2-202ENST00000420239 SCP2P22307 547 aa6.95□□□□□ -1.3
CHD2-202ENST00000420239 EIF4A1P60842 406 aaKnown RBP6.95□□□□□ -1.3
CHD2-202ENST00000420239 TUBB4BP68371 445 aa6.95□□□□□ -1.3
CHD2-202ENST00000420239 GUCY1B3Q02153 619 aa6.95□□□□□ -1.3
CHD2-202ENST00000420239 OS9Q13438 667 aaPredicted RBP6.95□□□□□ -1.3
CHD2-202ENST00000420239 MTF1Q14872 753 aa6.95□□□□□ -1.3
CHD2-202ENST00000420239 Q6ZUG5 572 aa6.95□□□□□ -1.3
CHD2-202ENST00000420239 SAMD7Q7Z3H4 446 aa6.95□□□□□ -1.3
CHD2-202ENST00000420239 AACSQ86V21 672 aa6.95□□□□□ -1.3
CHD2-202ENST00000420239 TC2NQ8N9U0 490 aa6.95□□□□□ -1.3
CHD2-202ENST00000420239 EAF2Q96CJ1 260 aaPredicted RBP6.95□□□□□ -1.3
CHD2-202ENST00000420239 BAG1Q99933 345 aaPredicted RBP6.95□□□□□ -1.3
CHD2-202ENST00000420239 TUBE1Q9UJT0 475 aa6.95□□□□□ -1.3
CHD2-202ENST00000420239 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP6.95□□□□□ -1.3
CHD2-202ENST00000420239 MROH7-TTC4A0A0A0MT08 1334 aa6.95□□□□□ -1.3
CHD2-202ENST00000420239 CDHR2Q9BYE9 1310 aa6.95□□□□□ -1.3
CHD2-202ENST00000420239 FAM237AA0A1B0GTK4 181 aa6.95□□□□□ -1.3
CHD2-202ENST00000420239 PIK3CDO00329 1044 aa6.95□□□□□ -1.3
CHD2-202ENST00000420239 ATP9BO43861 1147 aa6.95□□□□□ -1.3
CHD2-202ENST00000420239 SHOX2O60902 331 aaPredicted RBP6.95□□□□□ -1.3
CHD2-202ENST00000420239 ERLIN1O75477 346 aa6.95□□□□□ -1.3
CHD2-202ENST00000420239 SERPINC1P01008 464 aa6.95□□□□□ -1.3
CHD2-202ENST00000420239 SLC3A2P08195 630 aaKnown RBP6.95□□□□□ -1.3
CHD2-202ENST00000420239 HMGB1P09429 215 aaKnown RBP6.95□□□□□ -1.3
CHD2-202ENST00000420239 RHOXF2BP0C7M4 288 aa6.95□□□□□ -1.3
CHD2-202ENST00000420239 HSP90B1P14625 803 aaKnown RBP6.95□□□□□ -1.3
CHD2-202ENST00000420239 TDO2P48775 406 aa6.95□□□□□ -1.3
CHD2-202ENST00000420239 AARSP49588 968 aaKnown RBP eCLIP6.95□□□□□ -1.3
CHD2-202ENST00000420239 MNAT1P51948 309 aa6.95□□□□□ -1.3
CHD2-202ENST00000420239 EXOSC10Q01780 885 aaKnown RBP6.95□□□□□ -1.3
CHD2-202ENST00000420239 CFAP100Q494V2 611 aa6.95□□□□□ -1.3
CHD2-202ENST00000420239 LINC00301Q8NCQ3 95 aa6.95□□□□□ -1.3
CHD2-202ENST00000420239 RHOXF2Q9BQY4 288 aa6.95□□□□□ -1.3
CHD2-202ENST00000420239 LRRC2Q9BYS8 371 aa6.95□□□□□ -1.3
CHD2-202ENST00000420239 CDC23Q9UJX2 597 aa6.95□□□□□ -1.3
CHD2-202ENST00000420239 LMO7Q8WWI1 1683 aa6.94□□□□□ -1.3
CHD2-202ENST00000420239 DDX60Q8IY21 1712 aaKnown RBP6.94□□□□□ -1.3
CHD2-202ENST00000420239 PIK3C2AO00443 1686 aa6.94□□□□□ -1.3
CHD2-202ENST00000420239 PI4KAP2A4QPH2 592 aa6.94□□□□□ -1.3
CHD2-202ENST00000420239 PPFIA3O75145 1194 aa6.94□□□□□ -1.3
CHD2-202ENST00000420239 CCT5P48643 541 aa6.94□□□□□ -1.3
CHD2-202ENST00000420239 MYL5Q02045 173 aa6.94□□□□□ -1.3
CHD2-202ENST00000420239 TUBB2AQ13885 445 aa6.94□□□□□ -1.3
CHD2-202ENST00000420239 FAM98CQ17RN3 349 aaKnown RBP6.94□□□□□ -1.3
CHD2-202ENST00000420239 HSP90B2PQ58FF3 399 aa6.94□□□□□ -1.3
CHD2-202ENST00000420239 POTEEQ6S8J3 1075 aa6.94□□□□□ -1.3
CHD2-202ENST00000420239 TXNDC2Q86VQ3 553 aa6.94□□□□□ -1.3
CHD2-202ENST00000420239 EGFL6Q8IUX8 553 aa6.94□□□□□ -1.3
CHD2-202ENST00000420239 CEP112Q8N8E3 955 aa6.94□□□□□ -1.3
CHD2-202ENST00000420239 PI4KAP1Q8N8J0 262 aa6.94□□□□□ -1.3
CHD2-202ENST00000420239 KCNG4Q8TDN1 519 aa6.94□□□□□ -1.3
CHD2-202ENST00000420239 TUBB2BQ9BVA1 445 aa6.94□□□□□ -1.3
CHD2-202ENST00000420239 CLIC4Q9Y696 253 aa6.94□□□□□ -1.3
CHD2-202ENST00000420239 FAM169AQ9Y6X4 670 aa6.94□□□□□ -1.3
CHD2-202ENST00000420239 C21orf2O43822 256 aa6.93□□□□□ -1.3
CHD2-202ENST00000420239 STX10O60499 249 aa6.93□□□□□ -1.3
CHD2-202ENST00000420239 FBXO45P0C2W1 286 aa6.93□□□□□ -1.3
CHD2-202ENST00000420239 ATP5JP18859 108 aa6.93□□□□□ -1.3
CHD2-202ENST00000420239 ADKP55263 362 aaKnown RBP6.93□□□□□ -1.3
CHD2-202ENST00000420239 SKIDA1Q1XH10 827 aa6.93□□□□□ -1.3
CHD2-202ENST00000420239 MAP9Q49MG5 647 aa6.93□□□□□ -1.3
CHD2-202ENST00000420239 DHX32Q7L7V1 743 aaKnown RBP6.93□□□□□ -1.3
CHD2-202ENST00000420239 RETREG3Q86VR2 466 aa6.93□□□□□ -1.3
CHD2-202ENST00000420239 ELOA2Q8IYF1 753 aaPredicted RBP6.93□□□□□ -1.3
CHD2-202ENST00000420239 IGSF22Q8N9C0 903 aa6.93□□□□□ -1.3
CHD2-202ENST00000420239 ZNF274Q96GC6 653 aaPredicted RBP6.93□□□□□ -1.3
CHD2-202ENST00000420239 FSD1Q9BTV5 496 aa6.93□□□□□ -1.3
CHD2-202ENST00000420239 FAM107BQ9H098 131 aa6.93□□□□□ -1.3
CHD2-202ENST00000420239 EHD4Q9H223 541 aa6.93□□□□□ -1.3
CHD2-202ENST00000420239 FANCLQ9NW38 375 aa6.93□□□□□ -1.3
CHD2-202ENST00000420239 TLR7Q9NYK1 1049 aaKnown RBP6.93□□□□□ -1.3
CHD2-202ENST00000420239 ZMIZ1Q9ULJ6 1067 aa6.93□□□□□ -1.3
CHD2-202ENST00000420239 ZNF202O95125 648 aa6.93□□□□□ -1.3
CHD2-202ENST00000420239 CYP21A2P08686 494 aa6.93□□□□□ -1.3
CHD2-202ENST00000420239 PFKFB1P16118 471 aa6.93□□□□□ -1.3
CHD2-202ENST00000420239 CMA1P23946 247 aa6.93□□□□□ -1.3
CHD2-202ENST00000420239 GPTP24298 496 aa6.93□□□□□ -1.3
CHD2-202ENST00000420239 FNTAP49354 379 aa6.93□□□□□ -1.3
CHD2-202ENST00000420239 PUS10Q3MIT2 529 aaKnown RBP6.93□□□□□ -1.3
CHD2-202ENST00000420239 RAD9BQ6WBX8 426 aa6.93□□□□□ -1.3
CHD2-202ENST00000420239 PPP1R3FQ6ZSY5 799 aaPredicted RBP6.93□□□□□ -1.3
CHD2-202ENST00000420239 PRPF38AQ8NAV1 312 aaKnown RBP6.93□□□□□ -1.3
CHD2-202ENST00000420239 NOA1Q8NC60 698 aaKnown RBP6.93□□□□□ -1.3
CHD2-202ENST00000420239 STK32AQ8WU08 396 aa6.93□□□□□ -1.3
CHD2-202ENST00000420239 RIN2Q8WYP3 895 aaPredicted RBP6.93□□□□□ -1.3
CHD2-202ENST00000420239 XAGE2Q96GT9 111 aa6.93□□□□□ -1.3
CHD2-202ENST00000420239 KAZALD1Q96I82 304 aa6.93□□□□□ -1.3
CHD2-202ENST00000420239 KAT14Q9H8E8 782 aa6.93□□□□□ -1.3
CHD2-202ENST00000420239 NCOA5Q9HCD5 579 aaKnown RBP6.93□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 76.6 ms