RNA–Protein interactions for RNA: ENST00000419799.5

NOD1-205, Transcript of nucleotide binding oligomerization domain containing 1, humanhuman

TSL 1 (best)

Gene NOD1, Length 757 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NOD1-205ENST00000419799 COL6A1P12109 1028 aa16.93■□□□□ 0.3
NOD1-205ENST00000419799 XRCC5P13010 732 aaKnown RBP16.93■□□□□ 0.3
NOD1-205ENST00000419799 HMGCS2P54868 508 aa16.93■□□□□ 0.3
NOD1-205ENST00000419799 RASGRF1Q13972 1273 aa16.93■□□□□ 0.3
NOD1-205ENST00000419799 PLXNB2O15031 1838 aa16.93■□□□□ 0.3
NOD1-205ENST00000419799 FAM196BA6NMK8 535 aa16.92■□□□□ 0.3
NOD1-205ENST00000419799 USP17L5A8MUK1 530 aa16.92■□□□□ 0.3
NOD1-205ENST00000419799 CAP2P40123 477 aa16.92■□□□□ 0.3
NOD1-205ENST00000419799 FAM109BQ6ICB4 259 aaPredicted RBP16.92■□□□□ 0.3
NOD1-205ENST00000419799 TRMT44Q8IYL2 757 aaKnown RBP16.92■□□□□ 0.3
NOD1-205ENST00000419799 SOCS4Q8WXH5 440 aa16.92■□□□□ 0.3
NOD1-205ENST00000419799 BCL11AQ9H165 835 aa16.92■□□□□ 0.3
NOD1-205ENST00000419799 DDX19BQ9UMR2 479 aa16.92■□□□□ 0.3
NOD1-205ENST00000419799 POTEB2H3BUK9 544 aa16.91■□□□□ 0.3
NOD1-205ENST00000419799 PRKAR2AP13861 404 aaKnown RBP16.91■□□□□ 0.3
NOD1-205ENST00000419799 CYP2B6P20813 491 aa16.91■□□□□ 0.3
NOD1-205ENST00000419799 PHF6Q8IWS0 365 aaKnown RBP eCLIP16.91■□□□□ 0.3
NOD1-205ENST00000419799 NUDT12Q9BQG2 462 aa16.91■□□□□ 0.3
NOD1-205ENST00000419799 AS3MTQ9HBK9 375 aa16.91■□□□□ 0.3
NOD1-205ENST00000419799 EXOC6BQ9Y2D4 811 aa16.91■□□□□ 0.3
NOD1-205ENST00000419799 APBB1O00213 710 aa16.9■□□□□ 0.3
NOD1-205ENST00000419799 HOXA7P31268 230 aaPredicted RBP16.9■□□□□ 0.3
NOD1-205ENST00000419799 MECOMQ03112 1051 aa16.9■□□□□ 0.3
NOD1-205ENST00000419799 TNNI3KQ59H18 835 aa16.9■□□□□ 0.3
NOD1-205ENST00000419799 ERICH6Q7L0X2 663 aa16.9■□□□□ 0.3
NOD1-205ENST00000419799 HERC5Q9UII4 1024 aaKnown RBP16.9■□□□□ 0.3
NOD1-205ENST00000419799 FPGT-TNNI3KV9GXZ4 949 aa16.9■□□□□ 0.3
NOD1-205ENST00000419799 IRX3P78415 501 aaPredicted RBP16.89■□□□□ 0.29
NOD1-205ENST00000419799 RRP1BQ14684 758 aaKnown RBP16.89■□□□□ 0.29
NOD1-205ENST00000419799 PI16Q6UXB8 463 aa16.89■□□□□ 0.29
NOD1-205ENST00000419799 ZNF384Q8TF68 577 aa16.89■□□□□ 0.29
NOD1-205ENST00000419799 DBNDD2Q9BQY9 259 aa16.89■□□□□ 0.29
NOD1-205ENST00000419799 WDR18Q9BV38 432 aa16.89■□□□□ 0.29
NOD1-205ENST00000419799 ZBTB40Q9NUA8 1239 aa16.89■□□□□ 0.29
NOD1-205ENST00000419799 ATAD5Q96QE3 1844 aa16.89■□□□□ 0.29
NOD1-205ENST00000419799 LDHCP07864 332 aa16.88■□□□□ 0.29
NOD1-205ENST00000419799 MAPK4P31152 587 aa16.88■□□□□ 0.29
NOD1-205ENST00000419799 GSTO1P78417 241 aa16.88■□□□□ 0.29
NOD1-205ENST00000419799 CACNB2Q08289 660 aaPredicted RBP16.88■□□□□ 0.29
NOD1-205ENST00000419799 LRRC26Q2I0M4 334 aa16.88■□□□□ 0.29
NOD1-205ENST00000419799 LHX8Q68G74 356 aa16.88■□□□□ 0.29
NOD1-205ENST00000419799 GPRC5AQ8NFJ5 357 aa16.88■□□□□ 0.29
NOD1-205ENST00000419799 USP6NLQ92738 828 aa16.88■□□□□ 0.29
NOD1-205ENST00000419799 P2RX7Q99572 595 aaKnown RBP16.88■□□□□ 0.29
NOD1-205ENST00000419799 CCDC8Q9H0W5 538 aaPredicted RBP16.88■□□□□ 0.29
NOD1-205ENST00000419799 NOP58Q9Y2X3 529 aaKnown RBP16.88■□□□□ 0.29
NOD1-205ENST00000419799 ZKSCAN1P17029 563 aaPredicted RBP16.87■□□□□ 0.29
NOD1-205ENST00000419799 BACE1P56817 501 aa16.87■□□□□ 0.29
NOD1-205ENST00000419799 HERVK_113P62684 666 aa16.87■□□□□ 0.29
NOD1-205ENST00000419799 MDM2Q00987 491 aaPredicted RBP16.87■□□□□ 0.29
NOD1-205ENST00000419799 MTMR2Q13614 643 aa16.87■□□□□ 0.29
NOD1-205ENST00000419799 PDE3AQ14432 1141 aa16.87■□□□□ 0.29
NOD1-205ENST00000419799 TTC39AQ5SRH9 613 aa16.87■□□□□ 0.29
NOD1-205ENST00000419799 TBC1D9Q6ZT07 1266 aa16.87■□□□□ 0.29
NOD1-205ENST00000419799 GUCD1Q96NT3 240 aa16.87■□□□□ 0.29
NOD1-205ENST00000419799 TXNRD2Q9NNW7 524 aa16.87■□□□□ 0.29
NOD1-205ENST00000419799 SNRKQ9NRH2 765 aa16.87■□□□□ 0.29
NOD1-205ENST00000419799 TLR7Q9NYK1 1049 aaKnown RBP16.87■□□□□ 0.29
NOD1-205ENST00000419799 TMOD4Q9NZQ9 345 aa16.87■□□□□ 0.29
NOD1-205ENST00000419799 HMG20BQ9P0W2 317 aa16.87■□□□□ 0.29
NOD1-205ENST00000419799 C19orf81C9J6K1 198 aa16.86■□□□□ 0.29
NOD1-205ENST00000419799 ASNSP08243 561 aa16.86■□□□□ 0.29
NOD1-205ENST00000419799 RGS2P41220 211 aa16.86■□□□□ 0.29
NOD1-205ENST00000419799 SPATA5Q8NB90 893 aa16.86■□□□□ 0.29
NOD1-205ENST00000419799 GTF3C2Q8WUA4 911 aaPredicted RBP16.86■□□□□ 0.29
NOD1-205ENST00000419799 NSUN4Q96CB9 384 aaKnown RBP16.86■□□□□ 0.29
NOD1-205ENST00000419799 PI4KBQ9UBF8 816 aa16.86■□□□□ 0.29
NOD1-205ENST00000419799 RBPJLQ9UBG7 517 aa16.86■□□□□ 0.29
NOD1-205ENST00000419799 CCND3P30281 292 aaPredicted RBP16.85■□□□□ 0.29
NOD1-205ENST00000419799 MCAMP43121 646 aa16.85■□□□□ 0.29
NOD1-205ENST00000419799 CCDC158Q5M9N0 1113 aa16.85■□□□□ 0.29
NOD1-205ENST00000419799 MORN1Q5T089 497 aa16.85■□□□□ 0.29
NOD1-205ENST00000419799 SIRT2Q8IXJ6 389 aa16.85■□□□□ 0.29
NOD1-205ENST00000419799 RPAP2Q8IXW5 612 aaPredicted RBP16.85■□□□□ 0.29
NOD1-205ENST00000419799 APBA2Q99767 749 aa16.85■□□□□ 0.29
NOD1-205ENST00000419799 DHX36Q9H2U1 1008 aaKnown RBP16.85■□□□□ 0.29
NOD1-205ENST00000419799 CHMP4BQ9H444 224 aaKnown RBP16.85■□□□□ 0.29
NOD1-205ENST00000419799 IL1RAPL2Q9NP60 686 aa16.85■□□□□ 0.29
NOD1-205ENST00000419799 GPR108Q9NPR9 543 aa16.85■□□□□ 0.29
NOD1-205ENST00000419799 HMMRO75330 724 aa16.84■□□□□ 0.29
NOD1-205ENST00000419799 UQCRFS1P1P0C7P4 283 aa16.84■□□□□ 0.29
NOD1-205ENST00000419799 ARID4AP29374 1257 aaPredicted RBP16.84■□□□□ 0.29
NOD1-205ENST00000419799 ERVK-9P63128 1117 aa16.84■□□□□ 0.29
NOD1-205ENST00000419799 ERVK-24P63145 666 aa16.84■□□□□ 0.29
NOD1-205ENST00000419799 Q3C1V9 767 aa16.84■□□□□ 0.29
NOD1-205ENST00000419799 GPR142Q7Z601 462 aa16.84■□□□□ 0.29
NOD1-205ENST00000419799 AACSQ86V21 672 aa16.84■□□□□ 0.29
NOD1-205ENST00000419799 EAF2Q96CJ1 260 aaPredicted RBP16.84■□□□□ 0.29
NOD1-205ENST00000419799 GINM1Q9NU53 330 aa16.84■□□□□ 0.29
NOD1-205ENST00000419799 RAI14Q9P0K7 980 aa16.84■□□□□ 0.29
NOD1-205ENST00000419799 UNC80Q8N2C7 3258 aa16.84■□□□□ 0.29
NOD1-205ENST00000419799 USP17L10C9JJH3 530 aa16.83■□□□□ 0.28
NOD1-205ENST00000419799 PEX10O60683 326 aa16.83■□□□□ 0.28
NOD1-205ENST00000419799 RRP1P56182 461 aaKnown RBP16.83■□□□□ 0.28
NOD1-205ENST00000419799 CCL14Q16627 93 aa16.83■□□□□ 0.28
NOD1-205ENST00000419799 PLEKHH3Q7Z736 793 aa16.83■□□□□ 0.28
NOD1-205ENST00000419799 ERC1Q8IUD2 1116 aa16.83■□□□□ 0.28
NOD1-205ENST00000419799 CUL9Q8IWT3 2517 aa16.83■□□□□ 0.28
NOD1-205ENST00000419799 CCAR1Q8IX12 1150 aaKnown RBP16.83■□□□□ 0.28
NOD1-205ENST00000419799 TEX11Q8IYF3 940 aa16.83■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms